##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062265_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2203883 Sequences flagged as poor quality 0 Sequence length 50 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.19153648356106 32.0 32.0 32.0 32.0 32.0 2 31.330292034559005 32.0 32.0 32.0 32.0 32.0 3 31.494253551572385 32.0 32.0 32.0 32.0 32.0 4 31.59409233611766 32.0 32.0 32.0 32.0 32.0 5 31.529480013231193 32.0 32.0 32.0 32.0 32.0 6 35.17684151109655 36.0 36.0 36.0 36.0 36.0 7 35.18110761778189 36.0 36.0 36.0 36.0 36.0 8 35.11683061215137 36.0 36.0 36.0 36.0 36.0 9 35.22978806043697 36.0 36.0 36.0 36.0 36.0 10 35.08041806212036 36.0 36.0 36.0 36.0 36.0 11 35.23632334384357 36.0 36.0 36.0 36.0 36.0 12 35.140480687949406 36.0 36.0 36.0 36.0 36.0 13 35.19088309134378 36.0 36.0 36.0 36.0 36.0 14 35.14292319510609 36.0 36.0 36.0 36.0 36.0 15 35.110124267032326 36.0 36.0 36.0 36.0 36.0 16 35.12432193542035 36.0 36.0 36.0 36.0 36.0 17 35.094939250404856 36.0 36.0 36.0 36.0 36.0 18 35.102955556170635 36.0 36.0 36.0 36.0 36.0 19 35.093342069429276 36.0 36.0 36.0 36.0 36.0 20 35.09229800311541 36.0 36.0 36.0 36.0 36.0 21 35.086657504050805 36.0 36.0 36.0 36.0 36.0 22 35.0780889911125 36.0 36.0 36.0 36.0 36.0 23 35.03843352845863 36.0 36.0 36.0 36.0 36.0 24 35.01845288520307 36.0 36.0 36.0 36.0 36.0 25 34.99842369127581 36.0 36.0 36.0 36.0 36.0 26 34.95627081836921 36.0 36.0 36.0 32.0 36.0 27 34.94727306304373 36.0 36.0 36.0 32.0 36.0 28 34.92179893397245 36.0 36.0 36.0 32.0 36.0 29 34.90094710109384 36.0 36.0 36.0 32.0 36.0 30 34.87628880480497 36.0 36.0 36.0 32.0 36.0 31 34.88672719922065 36.0 36.0 36.0 32.0 36.0 32 34.85504039915005 36.0 36.0 36.0 32.0 36.0 33 34.827554366543055 36.0 36.0 36.0 32.0 36.0 34 34.820471867154474 36.0 36.0 36.0 32.0 36.0 35 34.810575697530226 36.0 36.0 36.0 32.0 36.0 36 34.78626587709057 36.0 36.0 36.0 32.0 36.0 37 34.77752085750468 36.0 36.0 36.0 32.0 36.0 38 34.755892213878866 36.0 36.0 36.0 32.0 36.0 39 34.74500279733543 36.0 36.0 36.0 32.0 36.0 40 34.729775128716 36.0 36.0 36.0 32.0 36.0 41 34.69374327040047 36.0 36.0 36.0 32.0 36.0 42 34.65256957833061 36.0 36.0 36.0 32.0 36.0 43 34.66873196081643 36.0 36.0 36.0 32.0 36.0 44 34.60926192542889 36.0 36.0 36.0 32.0 36.0 45 34.59966341225918 36.0 36.0 36.0 32.0 36.0 46 34.58164748310142 36.0 36.0 36.0 32.0 36.0 47 34.56047303781553 36.0 36.0 36.0 32.0 36.0 48 34.53518403653914 36.0 36.0 36.0 32.0 36.0 49 34.5235754348121 36.0 36.0 36.0 32.0 36.0 50 34.06326787765049 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 10.0 20 14.0 21 67.0 22 139.0 23 418.0 24 995.0 25 2377.0 26 5128.0 27 9898.0 28 17420.0 29 28232.0 30 44016.0 31 66545.0 32 103876.0 33 183033.0 34 417892.0 35 1323822.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.78949938816933 17.416386168632876 11.88172423684564 25.91239020635215 2 16.605771351249807 19.369928604553444 36.57984319683163 27.444456847365124 3 18.885400591775312 22.732257743966656 28.14780498185697 30.234536682401057 4 12.868060600313175 15.4535880534493 34.77829812199649 36.90005322424103 5 15.299737145517387 36.0285786755274 32.50393283484907 16.167751344106147 6 36.04136161740277 34.480840372815386 15.786619864339194 13.691178145442647 7 31.661390373263913 29.773994354509746 19.480707460423265 19.083907811803076 8 29.00085893851897 32.39355265229597 18.49798741584739 20.10760099333767 9 27.156205660645327 14.15578776187302 18.302060499581874 40.38594607789978 10 16.771247423293204 26.137505734207732 30.072658253924107 27.01858858857496 11 38.16777024914662 20.875654469860695 21.318282322609686 19.638292958383 12 24.928637318768736 23.111571712291443 27.81812827631957 24.14166269262025 13 29.425654628671303 18.876909527411392 24.86075712730667 26.836678716610635 14 24.050006284362645 19.032997668206526 24.304693125724004 32.61230292170683 15 25.70776216341793 26.488974233205663 21.537486336615874 26.26577726676053 16 26.678228136661293 25.41744711126599 22.749823946218292 25.154500805854425 17 24.66378659847188 25.6640665588872 24.313450396413966 25.358696446226954 18 25.535373976804543 24.61318220592773 25.204276094887202 24.647167722380527 19 26.170853897416514 24.68316149269267 24.459692279490337 24.68629233040048 20 26.36880618801537 23.873834835310383 24.077884705697652 25.679474270976595 21 27.403950209698063 23.768367014038404 23.910752068054432 24.9169307082091 22 26.6327205210077 23.71391766259824 24.498941186986787 25.154420629407277 23 24.94222691697056 23.708539617157186 25.169507791028643 26.179725674843606 24 25.30242338002708 24.56431068341785 24.66023311783304 25.473032818722025 25 25.43322517545217 23.996711250219498 24.69298422734118 25.877079346987152 26 25.189132777494187 25.034314559582555 24.913209687482276 24.863342975440986 27 25.819761020820607 24.230877082809634 24.36332567106831 25.586036225301445 28 25.261882614515507 24.18145518070649 25.171631463121358 25.385030741656646 29 25.02154162240746 24.458714272555632 25.06632641717558 25.453417687861325 30 25.023186632883455 24.609048867076616 25.250016335005554 25.117748165034374 31 25.625512166303515 24.395995415345887 24.246032214182843 25.73246020416775 32 25.614658234820887 24.214119999074356 24.00226510946441 26.16895665664035 33 25.108569836574663 23.998165055191272 24.81567743448943 26.077587673744635 34 25.90871883666565 24.228221965703998 24.764233131506728 25.098826066123625 35 26.244035508349832 23.79766375240712 25.027769257435533 24.930531481807506 36 24.866247194151768 24.7005847417213 24.55692894210617 25.876239122020767 37 26.23107177795968 24.340336828425865 24.363705003784283 25.06488638983017 38 25.337506573624825 23.900315942361733 24.875912196790846 25.8862652872226 39 26.111512173829 24.083032233796324 24.090201450450504 25.71525414192417 40 26.10017432906903 24.35284530268917 24.58076173000502 24.966218638236782 41 24.926617555975525 24.970994139840688 25.06301429534023 25.039374008843556 42 26.536732518582816 24.628105398762038 24.393236539169237 24.441925543485908 43 25.9027503944336 23.692197951440992 24.675548021070945 25.729503633054467 44 25.226631478928653 24.461089446491922 24.38771611554235 25.92456295903708 45 25.451607619215288 24.63521774858441 24.503176034292732 25.409998597907567 46 25.277301208667996 24.579970061225204 24.329315632641524 25.813413097465276 47 25.48111128857784 24.268191751185196 24.912834595363762 25.337862364873203 48 26.402713494872494 24.78060622561031 23.713994010345765 25.102686269171432 49 25.353628626982093 25.074746063041253 24.047109644953366 25.52451566502329 50 25.73203778118999 24.886743550371897 24.088639506898843 25.29257916153927 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 41.0 1 43.5 2 46.0 3 125.0 4 204.0 5 233.0 6 262.0 7 214.5 8 167.0 9 239.0 10 311.0 11 509.0 12 707.0 13 1250.5 14 1794.0 15 2442.0 16 3090.0 17 3211.0 18 3332.0 19 3410.0 20 3488.0 21 4268.0 22 5048.0 23 6050.0 24 7052.0 25 9131.5 26 11211.0 27 14261.0 28 17311.0 29 19695.0 30 22079.0 31 24702.0 32 27325.0 33 31160.5 34 34996.0 35 41219.0 36 47442.0 37 58337.5 38 69233.0 39 77994.0 40 86755.0 41 96258.0 42 105761.0 43 109547.0 44 113333.0 45 125846.0 46 138359.0 47 149138.0 48 159917.0 49 167418.0 50 174919.0 51 170077.5 52 165236.0 53 165581.0 54 165926.0 55 169731.5 56 173537.0 57 169980.5 58 166424.0 59 153584.5 60 140745.0 61 123769.0 62 106793.0 63 92293.0 64 77793.0 65 66114.5 66 54436.0 67 47019.0 68 39602.0 69 35628.0 70 31654.0 71 24312.5 72 16971.0 73 14931.0 74 12891.0 75 9318.0 76 5745.0 77 5164.0 78 4583.0 79 3851.5 80 3120.0 81 2470.0 82 1820.0 83 1530.5 84 1241.0 85 986.0 86 731.0 87 476.0 88 221.0 89 154.0 90 87.0 91 59.5 92 32.0 93 34.0 94 36.0 95 34.0 96 32.0 97 28.0 98 24.0 99 22.0 100 20.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.02990176883255599 2 0.004582820412880357 3 2.722467572008133E-4 4 0.0 5 9.074891906693775E-5 6 1.814978381338755E-4 7 0.0 8 0.0 9 0.0 10 1.814978381338755E-4 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 4.991190548681577E-4 17 0.0 18 1.3612337860040665E-4 19 0.0 20 4.537445953346888E-4 21 0.0 22 0.0 23 9.074891906693775E-5 24 8.621147311359087E-4 25 2.722467572008133E-4 26 3.62995676267751E-4 27 4.0837013580121995E-4 28 0.0014973571646044732 29 4.537445953346888E-4 30 0.0012251104074036598 31 4.0837013580121995E-4 32 7.25991352535502E-4 33 9.074891906693775E-5 34 4.991190548681577E-4 35 3.176212167342822E-4 36 1.814978381338755E-4 37 0.0014066082455375353 38 0.0 39 7.25991352535502E-4 40 2.268722976673444E-4 41 8.167402716024399E-4 42 0.004537445953346889 43 0.004083701358012199 44 0.0038568290603448554 45 0.001542731624137942 46 0.0023594718957403817 47 0.0012251104074036598 48 0.003766080141277917 49 0.003992952438945261 50 0.0015881060836714107 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 2203883.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 39.702423673595135 #Duplication Level Percentage of deduplicated Percentage of total 1 64.37516134220179 25.558499296641386 2 16.689857055233507 13.252555517172432 3 7.3110616681823695 8.70800603561873 4 3.76096466751935 5.972776506051004 5 2.1835758901944087 4.334662755797303 6 1.4126878905437394 3.3652279889354957 7 0.9081654450410885 2.523945848531826 8 0.6244566508897649 1.9833954015535786 9 0.44450916526872514 1.588328208566554 >10 2.0625806987039175 14.018783539026499 >50 0.11540163638903377 3.172034379745428 >100 0.09208738246442319 7.6222619210079685 >500 0.013070104940779894 3.6601248839032117 >1k 0.0064204024270497675 4.239397717448612 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 3283 0.14896435064837835 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 2939 0.13335553656886506 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 2806 0.1273207334509137 No Hit TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCGGCGGCGTTATT 2719 0.1233731554715019 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC 2671 0.12119518141389539 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 2648 0.12015156884462559 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCG 2478 0.11243791072393589 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 2450 0.11116742585699876 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGA 2438 0.11062293234259714 No Hit GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTA 2433 0.11039606004492979 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATGGTCGGAACTACG 2220 0.10073130016430092 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 4.5374459533468884E-5 6 0.0 0.0 0.0 0.0 9.074891906693777E-5 7 0.0 0.0 0.0 0.0 9.074891906693777E-5 8 0.0 0.0 0.0 0.0 9.074891906693777E-5 9 0.0 0.0 0.0 0.0 9.074891906693777E-5 10 0.0 0.0 0.0 0.0 1.3612337860040665E-4 11 0.0 0.0 0.0 0.0 1.3612337860040665E-4 12 0.0 0.0 0.0 0.0 3.176212167342822E-4 13 0.0 0.0 0.0 0.0 3.6299567626775107E-4 14 0.0 0.0 0.0 0.0 3.6299567626775107E-4 15 0.0 0.0 0.0 0.0 4.0837013580121995E-4 16 0.0 0.0 0.0 9.074891906693777E-5 4.0837013580121995E-4 17 0.0 0.0 0.0 9.074891906693777E-5 4.0837013580121995E-4 18 0.0 0.0 0.0 1.3612337860040665E-4 4.5374459533468884E-4 19 0.0 0.0 0.0 1.8149783813387554E-4 4.5374459533468884E-4 20 0.0 0.0 0.0 3.176212167342822E-4 5.444935144016266E-4 21 0.0 0.0 0.0 4.5374459533468884E-4 5.898679739350954E-4 22 0.0 0.0 0.0 4.5374459533468884E-4 6.352424334685644E-4 23 0.0 0.0 0.0 8.621147311359087E-4 6.352424334685644E-4 24 0.0 0.0 0.0 0.0013612337860040664 6.352424334685644E-4 25 0.0 0.0 0.0 0.001542731624137942 6.352424334685644E-4 26 0.0 0.0 0.0 0.0017696039218052864 6.352424334685644E-4 27 0.0 0.0 0.0 0.0022233485171399754 6.352424334685644E-4 28 0.0 0.0 0.0 0.0029039654101420086 6.352424334685644E-4 29 0.0 0.0 0.0 0.004492071493813419 6.352424334685644E-4 30 0.0 0.0 0.0 0.007350662444421959 6.352424334685644E-4 31 0.0 0.0 0.0 0.012341852993103536 6.352424334685644E-4 32 0.0 0.0 0.0 0.01746916692038552 6.352424334685644E-4 33 0.0 0.0 0.0 0.02268722976673444 6.352424334685644E-4 34 0.0 0.0 0.0 0.027043177881947454 6.352424334685644E-4 35 0.0 0.0 0.0 0.033577100054766974 6.352424334685644E-4 36 0.0 0.0 0.0 0.04283348979959462 6.352424334685644E-4 37 0.0 0.0 0.0 0.057761686986105884 6.352424334685644E-4 38 0.0 0.0 0.0 0.07504935606835753 6.352424334685644E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 2835 0.0 26.47203 1 GGTATCA 1310 0.0 24.528305 1 CGCAATA 635 0.0 22.519464 36 ATACGAA 680 0.0 20.707558 40 TACGAAT 695 0.0 20.260633 41 TAGCGGC 675 0.0 20.20675 30 CGAATGC 700 0.0 20.115915 43 CTAGCGG 685 0.0 19.911762 29 GCAATAC 725 0.0 19.725286 37 CAATACG 725 0.0 19.422262 38 AATACGA 730 0.0 19.289232 39 GCGCAAT 770 0.0 18.856958 35 TCTAGCG 730 0.0 18.382963 28 TCAACGC 4170 0.0 17.989006 4 AACGCAG 4175 0.0 17.914772 6 ATCAACG 4220 0.0 17.72374 3 GGCGTTA 845 0.0 17.445198 42 CAACGCA 4355 0.0 17.275349 5 GTATAGA 230 0.0 17.223866 1 CGCGCCA 180 2.8740033E-10 17.110556 10 >>END_MODULE