##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062263_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 147362 Sequences flagged as poor quality 0 Sequence length 25 %GC 40 >>END_MODULE >>Per base sequence quality warn #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 26.486400836036427 32.0 14.0 32.0 14.0 32.0 2 23.947557715014725 32.0 14.0 32.0 14.0 32.0 3 24.49680378930796 32.0 14.0 32.0 14.0 32.0 4 24.251163800708458 32.0 14.0 32.0 14.0 32.0 5 24.470480856665898 21.0 14.0 32.0 14.0 32.0 6 27.89405002646544 32.0 21.0 36.0 14.0 36.0 7 27.734931664879685 32.0 21.0 36.0 14.0 36.0 8 27.030801699216894 32.0 21.0 36.0 14.0 36.0 9 27.736234578792363 32.0 21.0 36.0 14.0 36.0 10 26.183643001587928 32.0 14.0 36.0 14.0 36.0 11 28.56393778586067 32.0 21.0 36.0 14.0 36.0 12 27.262516795374655 32.0 21.0 36.0 14.0 36.0 13 27.6492175730514 32.0 21.0 36.0 14.0 36.0 14 26.540030672765027 32.0 14.0 36.0 14.0 36.0 15 26.344783594142317 32.0 14.0 36.0 14.0 36.0 16 26.72410119298055 32.0 21.0 36.0 14.0 36.0 17 26.384020303741806 32.0 14.0 36.0 14.0 36.0 18 26.47187198870808 32.0 14.0 36.0 14.0 36.0 19 26.771901847151913 32.0 14.0 36.0 14.0 36.0 20 26.680073560347985 32.0 14.0 36.0 14.0 36.0 21 26.35972638807834 32.0 14.0 36.0 14.0 36.0 22 26.19876901779292 32.0 14.0 36.0 14.0 36.0 23 25.911714010396167 32.0 14.0 36.0 14.0 36.0 24 26.192200160149834 32.0 14.0 36.0 14.0 36.0 25 24.834251706681506 21.0 14.0 36.0 14.0 36.0 >>END_MODULE >>Per sequence quality scores fail #Quality Count 3 1.0 4 10.0 5 30.0 6 31.0 7 12.0 8 11.0 9 6.0 10 7.0 11 5.0 12 4.0 13 6.0 14 276.0 15 743.0 16 1772.0 17 3675.0 18 6252.0 19 8446.0 20 9719.0 21 9449.0 22 8846.0 23 8145.0 24 7594.0 25 7460.0 26 7117.0 27 7237.0 28 7191.0 29 7144.0 30 7030.0 31 7263.0 32 7711.0 33 7538.0 34 8972.0 35 7659.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 36.81613984609329 24.086942359631383 14.111507715693328 24.985410078581996 2 11.333993838302954 21.7891993865447 47.22452192559818 19.652284849554157 3 16.47303918242152 28.186370977592595 31.79313527232258 23.547454567663305 4 9.659796542995391 17.77432424178673 42.05004309379517 30.51583612142271 5 9.828543502165266 40.88280412147211 37.47064333518863 11.818009041173996 6 27.299947041809812 41.71340113792214 19.380660755265268 11.605991065002783 7 24.635456638526477 33.264963766393414 24.573652361127145 17.525927233952963 8 21.919529456511402 41.914231767119006 21.363272070309847 14.802966706059742 9 24.784687695275355 15.034504306246093 23.277501562202843 36.903306436275706 10 13.85533984539514 30.06507533250914 35.81588707595745 20.263697746138277 11 31.9207331571546 23.00355301326775 28.41051909320036 16.665194736377284 12 22.529260323476866 25.57111124696868 35.20612989341974 16.693498536134715 13 27.457373819713332 24.17430881054276 28.152299436179607 20.216017933564295 14 17.957234652429662 25.551887625490753 29.530912499490565 26.959965222589016 15 19.282240095646976 37.38383783490028 24.591734144883432 18.74218792456932 16 18.00897969718994 29.951569409255473 33.31318222264487 18.72626867090972 17 17.368800010868235 32.825469711584184 31.718947411321984 18.086782866225597 18 17.711064321130205 28.464986755416692 36.78937716497997 17.034571758473138 19 21.570851302251352 27.760535162484295 30.388807769363986 20.27980576590037 20 21.96566337064001 28.972889275236334 31.34643594480061 17.715011409323047 21 19.836467480254534 28.225658578326506 29.495616269040877 22.44225767237808 22 20.63803630979468 31.887552382957622 30.082250582410193 17.392160724837503 23 17.284420117619895 31.974683200456354 32.39844078938433 18.342455892539423 24 20.405571514916907 28.64603494760576 33.33808718565152 17.61030635182582 25 18.42914869774865 30.359604740398655 32.77462732181059 18.436619240042106 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 22.0 1 22.0 2 70.5 3 119.0 4 119.0 5 119.0 6 233.5 7 348.0 8 348.0 9 348.0 10 523.5 11 699.0 12 699.0 13 699.0 14 1053.0 15 1407.0 16 1407.0 17 1407.0 18 2424.5 19 3442.0 20 3442.0 21 3442.0 22 5408.0 23 7374.0 24 7374.0 25 7374.0 26 10356.5 27 13339.0 28 13339.0 29 13339.0 30 16192.0 31 19045.0 32 19045.0 33 19045.0 34 20118.0 35 21191.0 36 21191.0 37 21191.0 38 20668.5 39 20146.0 40 20146.0 41 20146.0 42 19181.5 43 18217.0 44 18217.0 45 18217.0 46 17063.5 47 15910.0 48 15910.0 49 15910.0 50 13307.5 51 10705.0 52 10705.0 53 10705.0 54 7931.0 55 5157.0 56 5157.0 57 5157.0 58 4383.0 59 3609.0 60 3609.0 61 3609.0 62 2968.5 63 2328.0 64 2328.0 65 2328.0 66 2064.5 67 1801.0 68 1801.0 69 1801.0 70 1378.5 71 956.0 72 956.0 73 956.0 74 747.0 75 538.0 76 538.0 77 538.0 78 522.0 79 506.0 80 506.0 81 506.0 82 367.5 83 229.0 84 229.0 85 229.0 86 181.5 87 134.0 88 134.0 89 134.0 90 84.5 91 35.0 92 35.0 93 35.0 94 24.5 95 14.0 96 14.0 97 14.0 98 52.5 99 91.0 100 91.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.006107408965676362 5 0.024429635862705447 6 0.05157367571015594 7 0.08346792253091027 8 0.08686092751184159 9 0.09093253348895916 10 0.10043294743556684 11 0.11061196237836077 12 0.10111154843175309 13 0.10314735142031188 14 0.09500413946607673 15 0.10450455341268441 16 0.095682740462263 17 0.09771854345082179 18 0.08957533149658663 19 0.0793963165537927 20 0.07736051356523391 21 0.07668191256904766 22 0.08753952850802785 23 0.07328890758811633 24 0.07668191256904766 25 0.0793963165537927 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 147362.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 68.64830884252626 #Duplication Level Percentage of deduplicated Percentage of total 1 88.76099290472398 60.932920540927746 2 7.146999428691231 9.812588481563088 3 1.5460078122150769 3.1839246529769687 4 0.6470000055262003 1.7766182480191521 5 0.417999967223628 1.4347495423066736 6 0.23999998082145424 0.9885355683378944 7 0.17499998601112784 0.8409417160990776 8 0.13899998888877693 0.7633691333075583 9 0.1059999915266924 0.6549048140066592 >10 0.6989999441241318 9.419233703338962 >50 0.08199999344517712 3.8614670637185085 >100 0.033999997282146616 3.8751967243895082 >500 0.005999999520378814 2.4555498110081966 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 673 0.4566984704333546 No Hit GTCCTACAGTGGACATTTCTAAATT 669 0.45398406644860956 No Hit CTGTAGGACGTGGAATATGGCAAGA 601 0.4078391987079437 No Hit GTCCTACAGTGTGCATTTCTCATTT 574 0.38951697181091466 No Hit GTCCTAAAGTGTGTATTTCTCATTT 554 0.37594495188718935 No Hit CTTTAGGACGTGAAATATGGCGAGG 506 0.34337210407024876 No Hit TATCAACGCAGAGTACTTTTTTTTT 499 0.3386218970969449 No Hit CTGTAGGACCTGGAATATGGCGAGA 349 0.23683174766900558 No Hit GGTATCAACGCAGAGTACTTTTTTT 298 0.20222309686350617 No Hit GTCCTTCAGTGTGCATTTCTCATTT 223 0.1513280221495365 No Hit ACGCAGAGTACTTTTTTTTTTTTTT 219 0.14861361816479146 No Hit TTTCTAAATTTTCCACCTTTTTCAG 203 0.13775600222581127 No Hit GAATATGGCAAGAAAACTGAAAATC 200 0.13572019923725248 No Hit ATTTAGAAATGTCCACTGTAGGACG 199 0.1350415982410662 No Hit GATATACACTGTTCTACAAATCCCG 188 0.12757698728301733 No Hit CTGAAGGACCTGGAATATGGCGAGA 179 0.12146957831734095 No Hit CTGTAGGACATGGAATATGGCAAGA 178 0.12079097732115472 No Hit TTCCAGGTCCTTCAGTGTGCATTTC 174 0.11807657333640965 No Hit ATTCCAGGTCCTTCAGTGTGCATTT 173 0.11739797234022338 No Hit GTGTATATCAATGAGTTACAATGAA 161 0.10925476038598823 No Hit CTCCTGGTGGTGCCCTTCCGTCAAT 160 0.10857615938980199 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 100 4.0017767E-11 15.196193 1 TATACAG 45 6.723747E-4 14.774077 5 ATAATGG 45 6.723747E-4 14.774077 3 TCCTAGA 40 0.0052578314 14.24643 2 TAATGGA 40 0.0052578314 14.24643 4 TTATAGA 40 0.0052578314 14.24643 4 TAGAAAT 90 3.5628545E-8 13.718786 4 CCACCTT 70 7.149616E-6 13.572643 13 TTAGGAC 185 0.0 12.834622 3 AGGACAT 75 1.4609237E-5 12.663495 5 TGTCCAC 100 1.40657E-7 12.351105 10 AATGTCC 100 1.40657E-7 12.351105 8 CACCTTT 85 3.871357E-6 12.2952175 14 GGCGAGG 140 5.0931703E-11 12.215379 19 GACATGG 55 0.003043754 12.091991 7 TTTAGAA 110 3.7227437E-8 12.08788 2 GGACATG 80 2.822667E-5 11.876062 6 CTTTTTC 105 2.652614E-7 11.762957 17 ATTTAGA 105 2.664383E-7 11.758959 1 GGACCTG 170 0.0 11.736344 6 >>END_MODULE