##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062262_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1627773 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.28210813178496 32.0 32.0 32.0 32.0 32.0 2 31.436215614830815 32.0 32.0 32.0 32.0 32.0 3 31.564205205516984 32.0 32.0 32.0 32.0 32.0 4 31.642832262238038 32.0 32.0 32.0 32.0 32.0 5 31.610854216159133 32.0 32.0 32.0 32.0 32.0 6 35.25385542087257 36.0 36.0 36.0 36.0 36.0 7 35.254781839974 36.0 36.0 36.0 36.0 36.0 8 35.206942859968805 36.0 36.0 36.0 36.0 36.0 9 35.29970272267693 36.0 36.0 36.0 36.0 36.0 10 35.17552508857193 36.0 36.0 36.0 36.0 36.0 11 35.29662428360711 36.0 36.0 36.0 36.0 36.0 12 35.2210062459569 36.0 36.0 36.0 36.0 36.0 13 35.25597610969097 36.0 36.0 36.0 36.0 36.0 14 35.21676425398382 36.0 36.0 36.0 36.0 36.0 15 35.1953546348293 36.0 36.0 36.0 36.0 36.0 16 35.20536032972657 36.0 36.0 36.0 36.0 36.0 17 35.18912649368186 36.0 36.0 36.0 36.0 36.0 18 35.1844796541041 36.0 36.0 36.0 36.0 36.0 19 35.180162713105574 36.0 36.0 36.0 36.0 36.0 20 35.17898564480428 36.0 36.0 36.0 36.0 36.0 21 35.17126712385572 36.0 36.0 36.0 36.0 36.0 22 35.14676493589708 36.0 36.0 36.0 36.0 36.0 23 35.119654890454626 36.0 36.0 36.0 36.0 36.0 24 35.10367477529115 36.0 36.0 36.0 36.0 36.0 25 35.09481174586383 36.0 36.0 36.0 36.0 36.0 26 35.05235066560264 36.0 36.0 36.0 36.0 36.0 27 35.03655055096749 36.0 36.0 36.0 36.0 36.0 28 35.01510038561888 36.0 36.0 36.0 36.0 36.0 29 34.99407902698964 36.0 36.0 36.0 36.0 36.0 30 34.97860696792489 36.0 36.0 36.0 36.0 36.0 31 34.982195920438535 36.0 36.0 36.0 36.0 36.0 32 34.94948558552083 36.0 36.0 36.0 36.0 36.0 33 34.93137618083111 36.0 36.0 36.0 32.0 36.0 34 34.91981130047003 36.0 36.0 36.0 32.0 36.0 35 34.90420285875242 36.0 36.0 36.0 32.0 36.0 36 34.88755127404128 36.0 36.0 36.0 32.0 36.0 37 34.872476076209644 36.0 36.0 36.0 32.0 36.0 38 34.86095174204266 36.0 36.0 36.0 32.0 36.0 39 34.84821532240675 36.0 36.0 36.0 32.0 36.0 40 34.830094859664094 36.0 36.0 36.0 32.0 36.0 41 34.80587526639157 36.0 36.0 36.0 32.0 36.0 42 34.77622924080938 36.0 36.0 36.0 32.0 36.0 43 34.775455177103936 36.0 36.0 36.0 32.0 36.0 44 34.73322877329947 36.0 36.0 36.0 32.0 36.0 45 34.7156126806379 36.0 36.0 36.0 32.0 36.0 46 34.69099254011462 36.0 36.0 36.0 32.0 36.0 47 34.663222083177445 36.0 36.0 36.0 32.0 36.0 48 34.637292177717654 36.0 36.0 36.0 32.0 36.0 49 34.620578545042825 36.0 36.0 36.0 32.0 36.0 50 34.21679374212498 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 1.0 18 2.0 19 3.0 20 10.0 21 40.0 22 103.0 23 277.0 24 782.0 25 1853.0 26 3652.0 27 7137.0 28 12555.0 29 19909.0 30 30233.0 31 44958.0 32 68805.0 33 117118.0 34 266809.0 35 1053526.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.31313842685968 17.599349082681005 12.218403900587619 25.869108589871697 2 16.220848899939362 19.457412776320695 37.16964544078915 27.152092882950797 3 18.854567905785217 22.843952155402793 28.290176130534412 30.011303808277585 4 12.6285499443411 15.472498605455801 35.264275340772535 36.63467610943056 5 14.719629038956317 36.4870510120582 33.04977601285684 15.743543936128649 6 35.39836709117382 34.79637786665192 16.063510201072635 13.74174484110163 7 31.219525081199894 30.021507912958377 19.47280118296593 19.286165822875795 8 28.580705049168404 33.09085480592196 18.441453445904312 19.886986699005327 9 27.02403836407165 14.278772285816267 18.342606739391794 40.35458261072029 10 16.22703684977801 26.700868856860087 30.8693913333018 26.20270296006011 11 37.57243792592702 21.282205811252553 21.65553796506024 19.48981829776019 12 24.665048504920524 23.28027310933404 28.442233652972497 23.612444732772936 13 29.483595071302936 19.368978352632706 25.141834887296937 26.005591688767417 14 23.68432207684978 19.19862290380784 24.925035616145493 32.19201940319688 15 25.342538548065363 26.959225887147653 21.946979093522252 25.75125647126473 16 25.885079163809987 26.088609896766364 23.28771246937517 24.738598470048483 17 24.242139413788042 26.022793104443924 24.72605209694472 25.009015384823314 18 24.795133959260856 25.267006231220485 25.705520002506493 24.232339807012167 19 25.615918190067045 24.93031890810328 25.319009468764992 24.134753433064684 20 25.908835958910633 24.41341492558219 24.940885346753745 24.736863768753427 21 26.476234708402213 24.067852212808543 24.788038627007573 24.667874451781667 22 25.883154469327113 24.162398565401933 25.183179718547976 24.771267246722978 23 24.69957420352838 24.138992353356397 25.442245325361707 25.71918811775352 24 24.721857372269408 24.743359287168516 25.384976427757866 25.149806912804205 25 25.08468641147091 24.33298316101169 25.323295060112915 25.259035367404486 26 24.64167168888422 25.088172938755974 25.582838330055836 24.687317042303967 27 25.148854136461708 24.88745324886593 25.10265590673855 24.86103670793381 28 24.833420365535247 24.53472584856397 25.59459376439871 25.03726002150207 29 24.660761633750347 24.77951349212785 25.416768032712362 25.142956841409443 30 24.819107017136453 24.824206055199852 25.473504046670325 24.883182880993367 31 25.199245346539158 24.59203313496342 24.832976709811664 25.375744808685763 32 25.191873755577436 24.708511005594794 24.724606714859597 25.37500852396817 33 24.85023999076037 24.493801646546103 25.21558622189485 25.440372140798672 34 25.2832889470467 24.66243384293091 25.519503856538606 24.534773353483786 35 25.716825565329682 24.412277678562102 25.413158025687956 24.45773873042026 36 24.787485202138633 24.89567008586599 25.12389657254807 25.192948139447306 37 25.612241199349533 24.72672383764327 24.94893254426819 24.712102418739008 38 25.093056587128547 24.473744189146768 25.204681488143617 25.228517735581068 39 25.552888646976324 24.486521121854512 24.898127437001197 25.062462794167967 40 25.703153940997915 24.664249867764116 25.00453073002194 24.62806546121603 41 24.692567748134394 24.915635441899497 25.539008586662504 24.8527882233036 42 25.659563618714692 24.91170083031016 25.107497980285125 24.32123757069002 43 25.31461416912616 24.22160485787377 25.298640788151193 25.165140184848877 44 24.86387358966404 24.808642790660524 25.09579379682561 25.231689822849823 45 25.106374613113413 24.9690060685442 24.929810571480175 24.99480874686221 46 25.000276457267695 24.754536663762842 25.018829811677307 25.226357067292156 47 25.138012594071572 24.83569344186761 25.212594071571186 24.813699892489634 48 25.691554392367188 25.092676213821875 24.381923069834308 24.83384632397663 49 25.010735974884884 25.13889187537054 24.714490647875383 25.135881501869196 50 25.12827506892942 25.26859128417597 24.588082213998202 25.015051432896414 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 146.0 1 102.5 2 59.0 3 165.0 4 271.0 5 279.0 6 287.0 7 229.0 8 171.0 9 233.5 10 296.0 11 545.5 12 795.0 13 1439.5 14 2084.0 15 2843.0 16 3602.0 17 3393.0 18 3184.0 19 2937.0 20 2690.0 21 3175.5 22 3661.0 23 4567.5 24 5474.0 25 7014.5 26 8555.0 27 10984.0 28 13413.0 29 15840.5 30 18268.0 31 21042.5 32 23817.0 33 27446.0 34 31075.0 35 36115.0 36 41155.0 37 48501.0 38 55847.0 39 62257.0 40 68667.0 41 75689.5 42 82712.0 43 86165.0 44 89618.0 45 98087.5 46 106557.0 47 113435.5 48 120314.0 49 125350.0 50 130386.0 51 128977.5 52 127569.0 53 126351.5 54 125134.0 55 124822.0 56 124510.0 57 119402.5 58 114295.0 59 104171.5 60 94048.0 61 82203.0 62 70358.0 63 60856.0 64 51354.0 65 43147.5 66 34941.0 67 29736.5 68 24532.0 69 21393.0 70 18254.0 71 14453.0 72 10652.0 73 9382.0 74 8112.0 75 5974.0 76 3836.0 77 3353.0 78 2870.0 79 2343.0 80 1816.0 81 1443.0 82 1070.0 83 878.5 84 687.0 85 523.0 86 359.0 87 247.0 88 135.0 89 94.5 90 54.0 91 41.0 92 28.0 93 22.0 94 16.0 95 18.5 96 21.0 97 18.5 98 16.0 99 9.0 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.03262125615795323 2 0.0055290264674497 3 1.8430088224832331E-4 4 6.143362741610778E-5 5 6.143362741610778E-5 6 1.8430088224832331E-4 7 0.0 8 0.0 9 0.0 10 1.2286725483221555E-4 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 5.529026467449699E-4 17 0.0 18 1.2286725483221555E-4 19 0.0 20 2.457345096644311E-4 21 0.0 22 0.0 23 0.0 24 6.757699015771855E-4 25 1.8430088224832331E-4 26 3.6860176449664663E-4 27 3.071681370805389E-4 28 0.0014129734305704789 29 5.529026467449699E-4 30 9.215044112416166E-4 31 3.6860176449664663E-4 32 6.143362741610778E-4 33 1.2286725483221555E-4 34 0.0011058052934899399 35 3.6860176449664663E-4 36 2.457345096644311E-4 37 0.0014744070579865865 38 0.0 39 2.457345096644311E-4 40 0.0 41 9.829380386577244E-4 42 0.004177486664295329 43 0.003993185782047005 44 0.003563150390134251 45 0.0021501769595637724 46 0.0021501769595637724 47 0.0014129734305704789 48 0.0038703185272147894 49 0.004177486664295329 50 0.0012901061757382632 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1627773.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 54.356375805114666 #Duplication Level Percentage of deduplicated Percentage of total 1 76.95038819586742 41.82744219124028 2 13.469907902647153 14.643507520331447 3 4.057216287926929 6.616067198075652 4 1.6667610497471792 3.623963599895403 5 0.9101146215154651 2.4735266196412153 6 0.5817865706760105 1.8974285684420475 7 0.3929905409504191 1.4953079072229398 8 0.29024148334479505 1.2621180114338886 9 0.2223204557718428 1.0876080818788796 >10 1.3011082903597515 12.952704321502742 >50 0.09374876715499515 3.5297331833795513 >100 0.05693810730319776 5.859117007747428 >500 0.00534128344793632 1.951530669244936 >1k 0.0011364432867949617 0.7799451199634895 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 6.143362741610778E-5 2 0.0 0.0 0.0 0.0 6.143362741610778E-5 3 0.0 0.0 0.0 0.0 6.143362741610778E-5 4 0.0 0.0 0.0 0.0 6.143362741610778E-5 5 0.0 0.0 0.0 0.0 6.143362741610778E-5 6 0.0 0.0 0.0 0.0 1.2286725483221555E-4 7 0.0 0.0 0.0 0.0 1.2286725483221555E-4 8 0.0 0.0 0.0 0.0 1.2286725483221555E-4 9 0.0 0.0 0.0 0.0 1.2286725483221555E-4 10 0.0 0.0 0.0 6.143362741610778E-5 1.2286725483221555E-4 11 0.0 0.0 0.0 6.143362741610778E-5 1.2286725483221555E-4 12 0.0 0.0 0.0 1.2286725483221555E-4 4.300353919127544E-4 13 0.0 0.0 0.0 1.2286725483221555E-4 5.529026467449699E-4 14 0.0 0.0 0.0 1.8430088224832331E-4 5.529026467449699E-4 15 0.0 0.0 0.0 1.8430088224832331E-4 6.143362741610778E-4 16 0.0 0.0 0.0 1.8430088224832331E-4 6.757699015771855E-4 17 0.0 0.0 0.0 2.457345096644311E-4 7.372035289932933E-4 18 0.0 6.143362741610778E-5 0.0 3.6860176449664663E-4 7.986371564094011E-4 19 0.0 6.143362741610778E-5 0.0 4.914690193288622E-4 7.986371564094011E-4 20 0.0 6.143362741610778E-5 0.0 6.143362741610778E-4 9.215044112416166E-4 21 0.0 6.143362741610778E-5 0.0 6.757699015771855E-4 9.829380386577244E-4 22 0.0 6.143362741610778E-5 0.0 7.372035289932933E-4 9.829380386577244E-4 23 0.0 6.143362741610778E-5 0.0 9.215044112416166E-4 9.829380386577244E-4 24 0.0 6.143362741610778E-5 0.0 0.0014129734305704789 9.829380386577244E-4 25 0.0 6.143362741610778E-5 0.0 0.001904442449899341 9.829380386577244E-4 26 0.0 6.143362741610778E-5 0.0 0.0020887433321476645 0.0010443716660738323 27 0.0 6.143362741610778E-5 0.0 0.003010247743389281 0.0010443716660738323 28 0.0 6.143362741610778E-5 0.0 0.004054619409463113 0.0010443716660738323 29 0.0 6.143362741610778E-5 0.0 0.005344725585201377 0.0010443716660738323 30 0.0 6.143362741610778E-5 0.0 0.007924937936677904 0.0010443716660738323 31 0.0 6.143362741610778E-5 0.0 0.012839628129966524 0.0010443716660738323 32 0.0 6.143362741610778E-5 0.0 0.01849152185224844 0.0011058052934899399 33 0.0 6.143362741610778E-5 0.0 0.02377481381003371 0.0011058052934899399 34 0.0 6.143362741610778E-5 0.0 0.029611008414563947 0.0011672389209060477 35 0.0 1.2286725483221555E-4 0.0 0.036430141057751914 0.0011672389209060477 36 0.0 1.2286725483221555E-4 0.0 0.04478511438634257 0.0011672389209060477 37 0.0 1.2286725483221555E-4 0.0 0.05762474251630909 0.0011672389209060477 38 0.0 1.2286725483221555E-4 0.0 0.07408895466382598 0.0011672389209060477 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 2240 0.0 27.607235 1 GGTATCA 1080 0.0 25.878826 1 CGTCTTA 120 5.984475E-10 21.999079 15 GGACCGT 105 1.7941857E-6 18.856352 6 TCAACGC 3370 0.0 18.278166 4 ATACGAA 280 0.0 18.073446 40 CAACGCA 3445 0.0 17.944096 5 ATCAACG 3470 0.0 17.814816 3 CGCAATA 285 0.0 17.75528 36 AACGCAG 3565 0.0 17.586922 6 TATCAAC 3615 0.0 17.161106 2 GTCTTAG 350 0.0 16.976976 1 GTGTACG 145 1.2453529E-7 16.69511 1 GTATAGT 185 4.2018655E-10 16.65409 1 TCTAGCG 305 0.0 16.58998 28 GTATATA 240 0.0 16.505392 1 CGAATGC 310 0.0 16.323902 43 TACGAAT 315 0.0 16.065287 41 GCGCAAT 320 0.0 15.812325 35 CAATACG 325 0.0 15.570971 38 >>END_MODULE