##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062261_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1416280 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.98489352387946 32.0 32.0 32.0 32.0 32.0 2 30.85034738893439 32.0 32.0 32.0 32.0 32.0 3 31.217653288897676 32.0 32.0 32.0 32.0 32.0 4 31.41683777219194 32.0 32.0 32.0 32.0 32.0 5 31.292799446437144 32.0 32.0 32.0 32.0 32.0 6 34.92256192278363 36.0 36.0 36.0 36.0 36.0 7 34.94355988928743 36.0 36.0 36.0 36.0 36.0 8 34.846136357217496 36.0 36.0 36.0 32.0 36.0 9 35.03990312650041 36.0 36.0 36.0 36.0 36.0 10 34.787441042731665 36.0 36.0 36.0 32.0 36.0 11 35.04348222102974 36.0 36.0 36.0 36.0 36.0 12 34.92690993306408 36.0 36.0 36.0 32.0 36.0 13 34.99189213997232 36.0 36.0 36.0 36.0 36.0 14 34.92818934109074 36.0 36.0 36.0 32.0 36.0 15 34.86852176123365 36.0 36.0 36.0 32.0 36.0 16 34.913513570762845 36.0 36.0 36.0 32.0 36.0 17 34.88290521648262 36.0 36.0 36.0 32.0 36.0 18 34.87593554946762 36.0 36.0 36.0 32.0 36.0 19 34.870087129663624 36.0 36.0 36.0 32.0 36.0 20 34.87871042449233 36.0 36.0 36.0 32.0 36.0 21 34.87522029542181 36.0 36.0 36.0 32.0 36.0 22 34.85133095150677 36.0 36.0 36.0 32.0 36.0 23 34.80293374191544 36.0 36.0 36.0 32.0 36.0 24 34.79402801705877 36.0 36.0 36.0 32.0 36.0 25 34.7671060807185 36.0 36.0 36.0 32.0 36.0 26 34.71733061259073 36.0 36.0 36.0 32.0 36.0 27 34.69385997119214 36.0 36.0 36.0 32.0 36.0 28 34.666798231988025 36.0 36.0 36.0 32.0 36.0 29 34.65261177168357 36.0 36.0 36.0 32.0 36.0 30 34.62519628886943 36.0 36.0 36.0 32.0 36.0 31 34.620168328296664 36.0 36.0 36.0 32.0 36.0 32 34.58056528370096 36.0 36.0 36.0 32.0 36.0 33 34.556763493094586 36.0 36.0 36.0 32.0 36.0 34 34.540155901375435 36.0 36.0 36.0 32.0 36.0 35 34.53244626768718 36.0 36.0 36.0 32.0 36.0 36 34.49651763775525 36.0 36.0 36.0 32.0 36.0 37 34.4947545683057 36.0 36.0 36.0 32.0 36.0 38 34.482280340045754 36.0 36.0 36.0 32.0 36.0 39 34.45006848928178 36.0 36.0 36.0 32.0 36.0 40 34.44269918377722 36.0 36.0 36.0 32.0 36.0 41 34.40233852063152 36.0 36.0 36.0 32.0 36.0 42 34.38112520123139 36.0 36.0 36.0 32.0 36.0 43 34.36903790210975 36.0 36.0 36.0 32.0 36.0 44 34.32452763577824 36.0 36.0 36.0 32.0 36.0 45 34.30059804558421 36.0 36.0 36.0 32.0 36.0 46 34.279000621346064 36.0 36.0 36.0 32.0 36.0 47 34.253050950377045 36.0 36.0 36.0 32.0 36.0 48 34.223839212585084 36.0 36.0 36.0 32.0 36.0 49 34.19717923009574 36.0 36.0 36.0 32.0 36.0 50 33.650953201344365 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 2.0 20 9.0 21 22.0 22 70.0 23 243.0 24 666.0 25 1667.0 26 3554.0 27 7235.0 28 12949.0 29 21560.0 30 34876.0 31 55635.0 32 90544.0 33 161705.0 34 341141.0 35 684401.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.645343010366126 17.002516489966176 12.078092411613852 26.274048088053842 2 16.344485688442507 19.153981018660065 37.19098481676391 27.310548476133516 3 19.334592504986674 22.24130200702547 28.127235176784172 30.296870311203683 4 13.522396701217273 15.536193408083149 34.510054508995395 36.431355381704186 5 15.383257547942497 35.91966277854661 32.90147428474595 15.795605388764933 6 36.1768213421527 34.15129949861503 15.736469631293879 13.935409527938392 7 31.53973790493405 29.843604372016834 19.32901686107267 19.287640861976445 8 28.312763012963536 33.711624819950856 18.362117660349647 19.613494506735957 9 27.088428841754453 14.721029739881944 17.701372609935888 40.48916880842771 10 15.868331120964783 27.3767899003022 31.717739430056202 25.03713954867682 11 37.408492670940774 21.01533595051826 21.56381506481769 20.012356313723277 12 24.52234021521168 22.96290281582738 28.670107605840656 23.844649363120286 13 29.952763577823593 19.6160363769876 24.321179427796764 26.110020617392042 14 23.306831982376366 18.70675290196854 25.074349704860623 32.912065410794476 15 25.29217386392521 26.680317451351428 21.909650634055414 26.117858050667948 16 25.92515708482757 25.86302217157285 23.19256245088341 25.019258292716163 17 24.376112068235095 25.71038212782783 24.941890021747113 24.971615782189964 18 24.7815578710127 25.55809978118718 25.17328859638532 24.4870537514148 19 25.609484000338917 25.10859434575084 25.095602564464652 24.18631908944559 20 25.611728812171098 24.758291657046346 25.077580381748433 24.55239914903412 21 25.845383681192985 24.44290676984777 24.914917954076877 24.796791594882368 22 25.654037337249697 24.292512779958766 24.85638433078205 25.19706555200949 23 24.89325902594051 24.549682654335765 25.037510264573577 25.51954805515015 24 24.945914191381856 24.58983751662821 24.96229527179884 25.501953020191092 25 25.049707825310886 24.595559057697795 25.21083461133282 25.143898505658502 26 25.065188610968914 24.723870717198285 24.98271875165487 25.22822192017793 27 25.14033301465677 25.03195003226777 24.689078525765495 25.138638427309967 28 25.32047321652374 24.793947460397593 24.639597815380597 25.24598150769807 29 25.182079494336207 25.00450123810526 24.70081770727054 25.112601560287995 30 25.36153038507461 24.821732563894905 24.61245058325702 25.204286467773468 31 25.07210817108259 24.698734355969005 24.97474007519726 25.254417397751144 32 25.093696691031102 24.968155834472476 24.741998712111798 25.19614876238463 33 25.007802140540203 24.77931592526326 24.867575433636617 25.345306500559918 34 25.172212682309613 24.83237683156908 24.909833704260198 25.085576781861114 35 25.069725011614953 24.74457698276751 25.201055160074503 24.984642845543036 36 25.312756393871826 24.74973133805651 24.823092641416444 25.11441962665522 37 25.25009532148052 24.59174162936184 24.96963834324206 25.188524705915583 38 25.3603101081707 24.785141356228994 24.68459626627503 25.169952269325275 39 25.31545824851565 24.977176010557287 24.647437323171452 25.059928417755618 40 25.4768304832593 24.795961812608958 24.684543087908526 25.042664616223213 41 25.05599222745977 24.90686790918103 24.89966588244598 25.137473980913217 42 25.33001744794039 24.622920422281112 24.811592606479394 25.23546952329911 43 25.084396065918252 24.520155143305615 24.960405694236638 25.435043096539495 44 24.949125351462268 24.831700590160043 24.945524231302066 25.273649827075623 45 25.248189592841975 24.82863267657825 24.814157892358445 25.109019838221336 46 25.088702747472723 24.846372137063664 24.76947877029925 25.29544634516437 47 25.2417977978713 24.999258613847964 24.930556830425925 24.82838675785481 48 25.3005718756377 24.995251433925734 24.498858578875975 25.205318111560587 49 25.146515542651205 24.90750103090454 24.665732733055037 25.280250693389217 50 25.126406963698024 25.083265137238314 24.698801561013912 25.091526338049746 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 44.0 1 37.5 2 31.0 3 88.0 4 145.0 5 162.5 6 180.0 7 152.5 8 125.0 9 172.5 10 220.0 11 338.5 12 457.0 13 872.5 14 1288.0 15 1700.5 16 2113.0 17 2082.5 18 2052.0 19 2150.0 20 2248.0 21 2655.5 22 3063.0 23 3955.0 24 4847.0 25 6325.5 26 7804.0 27 9408.5 28 11013.0 29 13383.0 30 15753.0 31 18554.0 32 21355.0 33 24793.5 34 28232.0 35 32552.5 36 36873.0 37 40659.5 38 44446.0 39 49852.0 40 55258.0 41 61447.0 42 67636.0 43 73256.5 44 78877.0 45 85794.0 46 92711.0 47 96773.0 48 100835.0 49 104737.5 50 108640.0 51 111804.0 52 114968.0 53 115602.5 54 116237.0 55 112912.0 56 109587.0 57 103695.0 58 97803.0 59 91455.5 60 85108.0 61 75677.5 62 66247.0 63 57318.5 64 48390.0 65 41221.0 66 34052.0 67 27757.0 68 21462.0 69 17545.0 70 13628.0 71 10956.0 72 8284.0 73 7201.5 74 6119.0 75 4648.0 76 3177.0 77 2663.5 78 2150.0 79 1786.0 80 1422.0 81 1123.0 82 824.0 83 564.5 84 305.0 85 229.0 86 153.0 87 96.5 88 40.0 89 33.0 90 26.0 91 17.5 92 9.0 93 9.0 94 9.0 95 10.0 96 11.0 97 13.5 98 16.0 99 11.5 100 7.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.029584545428869995 2 0.0033185528285367303 3 3.5303753495071594E-4 4 0.0 5 0.0 6 2.1182252097042958E-4 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 4.942525489310024E-4 17 0.0 18 7.06075069901432E-5 19 0.0 20 4.942525489310024E-4 21 0.0 22 0.0 23 7.06075069901432E-5 24 8.472900838817183E-4 25 2.824300279605728E-4 26 3.5303753495071594E-4 27 4.2364504194085915E-4 28 0.0010591126048521478 29 2.1182252097042958E-4 30 6.354675629112888E-4 31 3.5303753495071594E-4 32 5.648600559211456E-4 33 1.412150139802864E-4 34 5.648600559211456E-4 35 1.412150139802864E-4 36 1.412150139802864E-4 37 0.0014121501398028638 38 0.0 39 4.942525489310024E-4 40 7.06075069901432E-5 41 8.472900838817183E-4 42 0.004730702968339594 43 0.002894907786595871 44 0.0038128053774677323 45 0.0016945801677634366 46 0.0023300477306747256 47 9.885050978620047E-4 48 0.004448272940379022 49 0.003389160335526873 50 0.0014827576467930069 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1416280.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 46.427163608129405 #Duplication Level Percentage of deduplicated Percentage of total 1 62.76374313296776 29.139425710929036 2 16.545539445706922 15.363249336611881 3 7.760004446891966 10.808249881669951 4 4.236732659392192 7.86797921366026 5 2.5207477612201505 5.851558436249692 6 1.5730111310230788 4.38182670824503 7 1.0854289804095758 3.527537220093633 8 0.7623836241017281 2.831624739866365 9 0.5572389643124733 2.3283922108463804 >10 2.134708286638517 15.582445087702585 >50 0.05021778780968047 1.5540793800966906 >100 0.010090892641648289 0.7107511963176838 >500 1.528868842950934E-4 0.052880877710755614 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.1182252097042958E-4 2 0.0 0.0 0.0 0.0 2.1182252097042958E-4 3 0.0 0.0 0.0 0.0 2.1182252097042958E-4 4 0.0 0.0 0.0 0.0 2.1182252097042958E-4 5 0.0 0.0 0.0 0.0 2.1182252097042958E-4 6 0.0 0.0 0.0 0.0 2.824300279605728E-4 7 0.0 0.0 0.0 0.0 2.824300279605728E-4 8 0.0 0.0 0.0 0.0 2.824300279605728E-4 9 0.0 0.0 0.0 0.0 2.824300279605728E-4 10 0.0 0.0 0.0 0.0 2.824300279605728E-4 11 0.0 0.0 0.0 0.0 3.5303753495071594E-4 12 0.0 0.0 0.0 0.0 9.885050978620047E-4 13 0.0 0.0 0.0 0.0 0.0011297201118422911 14 0.0 0.0 0.0 0.0 0.0011297201118422911 15 0.0 0.0 0.0 0.0 0.0012709351258225776 16 0.0 0.0 0.0 0.0 0.0013415426328127207 17 0.0 0.0 0.0 0.0 0.0014121501398028638 18 0.0 0.0 0.0 0.0 0.0014121501398028638 19 0.0 0.0 0.0 0.0 0.0014121501398028638 20 0.0 0.0 0.0 0.0 0.0016239726607732935 21 0.0 0.0 0.0 0.0 0.0016239726607732935 22 0.0 0.0 0.0 0.0 0.0017651876747535797 23 0.0 0.0 0.0 1.412150139802864E-4 0.0017651876747535797 24 0.0 0.0 0.0 2.824300279605728E-4 0.0017651876747535797 25 0.0 0.0 0.0 2.824300279605728E-4 0.0017651876747535797 26 0.0 0.0 0.0 4.2364504194085915E-4 0.0017651876747535797 27 0.0 0.0 0.0 7.060750699014319E-4 0.0019770101957240094 28 0.0 0.0 0.0 0.0011297201118422911 0.0019770101957240094 29 0.0 0.0 0.0 0.0020476177027141528 0.0019770101957240094 30 0.0 0.0 0.0 0.0037421978704775894 0.0019770101957240094 31 0.0 0.0 0.0 0.007484395740955179 0.0020476177027141528 32 0.0 0.0 0.0 0.010873556076482051 0.002188832716694439 33 0.0 0.0 0.0 0.014192108905018782 0.002188832716694439 34 0.0 0.0 0.0 0.01807552178947666 0.0024006552376648685 35 0.0 0.0 0.0 0.023371084813737397 0.0024006552376648685 36 0.0 0.0 0.0 0.030290620498771428 0.0024006552376648685 37 0.0 0.0 0.0 0.042576326715056345 0.0024006552376648685 38 0.0 0.0 0.0 0.05860423080181885 0.002471262744655012 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAAACGT 20 7.857443E-4 43.999615 33 GTATCAA 1160 0.0 26.371147 1 GATTGCG 55 1.5939014E-4 23.999788 31 GGTATCA 575 0.0 21.816206 1 TCAACGC 1550 0.0 18.87592 4 ATCAACG 1610 0.0 18.17247 3 CAACGCA 1620 0.0 18.060293 5 TATCAAC 1650 0.0 17.865248 2 AACGCAG 1690 0.0 17.442402 6 GCGTAAG 95 3.338052E-4 16.216108 1 GTATAGG 220 1.8189894E-11 16.00551 1 CCTATAC 165 3.1146556E-8 15.998729 3 GTATAAG 320 0.0 15.8179455 1 GTCGCGT 195 8.931238E-10 15.794174 16 GTATAGC 170 4.472531E-8 15.534759 1 TATACTG 275 0.0 15.198792 5 GTAACAC 190 1.0775693E-8 15.051436 3 GAATAAG 220 3.0377123E-10 15.005166 1 CGTAAAC 90 0.0043587317 14.667054 38 GCGTGAT 90 0.0043597547 14.666536 35 >>END_MODULE