##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062260_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1615190 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.26704845869526 32.0 32.0 32.0 32.0 32.0 2 31.408883784570236 32.0 32.0 32.0 32.0 32.0 3 31.545280121843252 32.0 32.0 32.0 32.0 32.0 4 31.63620007553291 32.0 32.0 32.0 32.0 32.0 5 31.603842891548364 32.0 32.0 32.0 32.0 32.0 6 35.24276029445452 36.0 36.0 36.0 36.0 36.0 7 35.25096242547316 36.0 36.0 36.0 36.0 36.0 8 35.194089859397344 36.0 36.0 36.0 36.0 36.0 9 35.28562336319566 36.0 36.0 36.0 36.0 36.0 10 35.16359375677165 36.0 36.0 36.0 36.0 36.0 11 35.28966313560634 36.0 36.0 36.0 36.0 36.0 12 35.21814028071001 36.0 36.0 36.0 36.0 36.0 13 35.24583052148664 36.0 36.0 36.0 36.0 36.0 14 35.2100712609662 36.0 36.0 36.0 36.0 36.0 15 35.18904029866455 36.0 36.0 36.0 36.0 36.0 16 35.2016109559866 36.0 36.0 36.0 36.0 36.0 17 35.18472377862666 36.0 36.0 36.0 36.0 36.0 18 35.177676310526934 36.0 36.0 36.0 36.0 36.0 19 35.167584618527854 36.0 36.0 36.0 36.0 36.0 20 35.162501625195794 36.0 36.0 36.0 36.0 36.0 21 35.153387527163986 36.0 36.0 36.0 36.0 36.0 22 35.14182541991964 36.0 36.0 36.0 36.0 36.0 23 35.11688655823773 36.0 36.0 36.0 36.0 36.0 24 35.10487001529232 36.0 36.0 36.0 36.0 36.0 25 35.09269497706152 36.0 36.0 36.0 36.0 36.0 26 35.05022814653385 36.0 36.0 36.0 36.0 36.0 27 35.03847473052706 36.0 36.0 36.0 36.0 36.0 28 35.02511654975576 36.0 36.0 36.0 36.0 36.0 29 35.007036323899975 36.0 36.0 36.0 36.0 36.0 30 34.99001293965416 36.0 36.0 36.0 36.0 36.0 31 34.98530822999152 36.0 36.0 36.0 36.0 36.0 32 34.960371844798445 36.0 36.0 36.0 36.0 36.0 33 34.9310842687238 36.0 36.0 36.0 36.0 36.0 34 34.9159844971799 36.0 36.0 36.0 36.0 36.0 35 34.91239977959249 36.0 36.0 36.0 36.0 36.0 36 34.88696438189934 36.0 36.0 36.0 32.0 36.0 37 34.88013051096156 36.0 36.0 36.0 32.0 36.0 38 34.86496820807459 36.0 36.0 36.0 32.0 36.0 39 34.84186009076332 36.0 36.0 36.0 32.0 36.0 40 34.830198923965604 36.0 36.0 36.0 32.0 36.0 41 34.79426692834899 36.0 36.0 36.0 32.0 36.0 42 34.77972870064822 36.0 36.0 36.0 32.0 36.0 43 34.753529306149744 36.0 36.0 36.0 32.0 36.0 44 34.721516973235346 36.0 36.0 36.0 32.0 36.0 45 34.684445173632824 36.0 36.0 36.0 32.0 36.0 46 34.67313566824956 36.0 36.0 36.0 32.0 36.0 47 34.62666249791046 36.0 36.0 36.0 32.0 36.0 48 34.60438833821408 36.0 36.0 36.0 32.0 36.0 49 34.581228833759496 36.0 36.0 36.0 32.0 36.0 50 34.159941554863515 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 5.0 20 13.0 21 49.0 22 108.0 23 295.0 24 713.0 25 1787.0 26 3807.0 27 7298.0 28 12306.0 29 20023.0 30 30446.0 31 45150.0 32 69102.0 33 117095.0 34 266967.0 35 1040025.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.54684405381068 17.04572619771623 12.170882728534997 26.236547019938094 2 16.3478660356284 18.911520906238312 37.12674507589548 27.61386798223781 3 19.252655268591525 22.146008042422384 27.754901141355326 30.84643554763077 4 12.87359381868387 15.038168884156045 34.16415406237037 37.92408323478971 5 15.061943176963702 36.00003714733251 32.87266513537107 16.065354540332716 6 36.53881991519259 33.90705360177663 15.559850890514982 13.994275592515798 7 31.779481051764808 29.735015694747986 18.906258706406057 19.57924454708115 8 28.739714832310746 33.38610318290727 17.90996724843517 19.964214736346808 9 26.89528786087086 14.503123471542049 17.933927277905386 40.66766138968171 10 16.1392258119638 27.152116563448615 30.93897989647032 25.76967772811727 11 37.59043827661142 21.222580625189604 21.16952185191835 20.017459246280623 12 24.83825432302082 23.143283452720734 28.245655309901625 23.772806914356824 13 29.845405184529373 19.467431076220134 24.552591336003815 26.134572403246676 14 23.603105516998 18.71550715395712 25.065348349110632 32.616038979934245 15 25.396826379559062 26.74025965985426 21.96818950092559 25.894724459661095 16 25.918551442285963 25.89360064735859 23.14697008814503 25.040877822210415 17 24.368464391186176 25.842408633040076 24.772875017799763 25.016251957973985 18 24.805208554540677 25.388731597354862 25.523143112044473 24.28291673605999 19 25.647075576247996 24.814913415759136 25.414099889177123 24.123911118815744 20 25.9355269300254 24.345555248745345 25.098285894008495 24.620631927220764 21 26.125813218027872 24.23668328392732 25.034547062013836 24.602956436030976 22 25.907044991610896 24.0436728805899 25.191835016313867 24.857447111485335 23 25.011237068084867 24.200125062686123 25.28606541645255 25.50257245277645 24 24.874719690337535 24.47457803412379 25.407911697658093 25.24279057788058 25 25.10127297796109 24.2324582448246 25.56121915144296 25.105049625771347 26 24.97475524505831 24.74945625491042 25.43773569252353 24.838052807507736 27 25.06239207919321 24.740757892729583 25.202932907542092 24.99391712053512 28 25.101924192546793 24.559195280252062 25.375084124219665 24.96379640298148 29 24.864256783446077 24.796648303411008 25.421717181097858 24.917377732045058 30 25.125714321093135 24.805748001758328 25.23833404533269 24.830203631815845 31 25.11018888904711 24.589566122929877 25.191789650819317 25.108455337203694 32 25.15281587984985 24.660362721407346 25.010354889458075 25.17646650928473 33 24.884301322385582 24.623650388468953 25.21590379318308 25.276144495962388 34 25.309594360497726 24.544539363463347 25.201866295850984 24.943999980187943 35 25.28526197047763 24.49129571775812 25.475766817609408 24.747675494154837 36 24.981101236081315 24.88414639809062 25.15928515928516 24.975467206542902 37 25.410438451103694 24.60408020738464 25.08663212319747 24.89884921831419 38 24.957249611500814 24.7414236096063 25.093889882923992 25.207436895968893 39 25.292475866407127 24.796368940598423 24.956475331480902 24.954679861513544 40 25.496149367040015 24.71221634124551 25.016267446100738 24.775366845613732 41 24.896899844413337 24.960917596028175 25.183803385016006 24.95837917454248 42 25.284328894651104 24.80071127885933 25.158455816568313 24.75650400992125 43 25.27066066835818 24.511522968543552 24.990619903635764 25.227196459462505 44 24.959616128782603 24.880241467378685 25.0017800479839 25.15836235585481 45 25.13684411256105 24.86950201187623 24.916989596689863 25.076664278872858 46 24.99229177578912 24.967216829560947 24.82512546760131 25.215365927048623 47 25.174981472549966 24.96026736487963 25.018094059390616 24.846657103179787 48 25.33223208448081 25.22803033304935 24.587341251758367 24.852396330711468 49 25.15474053678884 24.98206018984313 24.603946572490145 25.259252700877887 50 25.208306246401307 25.19895738529071 24.663719608462266 24.929016759845712 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 30.0 1 43.5 2 57.0 3 149.5 4 242.0 5 276.0 6 310.0 7 251.0 8 192.0 9 279.0 10 366.0 11 658.5 12 951.0 13 1717.5 14 2484.0 15 3375.0 16 4266.0 17 4365.5 18 4465.0 19 4280.0 20 4095.0 21 4354.0 22 4613.0 23 5242.5 24 5872.0 25 6888.0 26 7904.0 27 9567.5 28 11231.0 29 13494.5 30 15758.0 31 19031.0 32 22304.0 33 25949.5 34 29595.0 35 33875.5 36 38156.0 37 43567.0 38 48978.0 39 55839.0 40 62700.0 41 68840.0 42 74980.0 43 81086.5 44 87193.0 45 95497.5 46 103802.0 47 110958.0 48 118114.0 49 123110.5 50 128107.0 51 130255.5 52 132404.0 53 133702.0 54 135000.0 55 131935.5 56 128871.0 57 122770.0 58 116669.0 59 106958.0 60 97247.0 61 85685.5 62 74124.0 63 64062.5 64 54001.0 65 45496.5 66 36992.0 67 30265.0 68 23538.0 69 19803.0 70 16068.0 71 12544.5 72 9021.0 73 7579.5 74 6138.0 75 4729.0 76 3320.0 77 2741.0 78 2162.0 79 1801.0 80 1440.0 81 1073.5 82 707.0 83 539.5 84 372.0 85 288.5 86 205.0 87 136.0 88 67.0 89 48.5 90 30.0 91 23.0 92 16.0 93 13.5 94 11.0 95 11.0 96 11.0 97 10.0 98 9.0 99 5.5 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.03046081265981092 2 0.0045815043431422925 3 3.095611042663711E-4 4 0.0 5 0.0 6 6.191222085327423E-5 7 0.0 8 0.0 9 0.0 10 6.191222085327423E-5 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 6.810344293860165E-4 17 0.0 18 6.191222085327423E-5 19 0.0 20 2.476488834130969E-4 21 1.2382444170654845E-4 22 0.0 23 0.0 24 7.429466502392908E-4 25 6.191222085327423E-5 26 1.857366625598227E-4 27 6.191222085327423E-5 28 0.0011763321962122103 29 4.952977668261938E-4 30 0.0012382444170654845 31 5.572099876794681E-4 32 6.810344293860165E-4 33 1.857366625598227E-4 34 7.429466502392908E-4 35 4.952977668261938E-4 36 3.095611042663711E-4 37 0.0016716299630384042 38 0.0 39 8.667710919458392E-4 40 6.191222085327423E-5 41 8.048588710925649E-4 42 0.00439576768058247 43 0.004210031018022647 44 0.004024294355462824 45 0.001919278846451501 46 0.0019811910673047752 47 0.0011763321962122103 48 0.0033432599260768085 49 0.004148118797169373 50 0.0012382444170654845 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1615190.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 52.48848855289191 #Duplication Level Percentage of deduplicated Percentage of total 1 69.38257931198305 36.417867199871374 2 15.948556579721576 16.742312589397297 3 6.256724335948399 9.852180110580834 4 2.8966467006830983 6.081624287623077 5 1.6033767416498386 4.207941087503034 6 0.9689362029614457 3.0514798078574636 7 0.6460808330671484 2.3738264487481517 8 0.43671036833368315 1.8337813735369384 9 0.3245667540756604 1.5332416520354621 >10 1.4497501726770752 12.924453991169859 >50 0.05893007577474858 2.1119837377883974 >100 0.02571977707412452 2.3291795521928624 >500 0.0013036338793349209 0.4355611411021243 >1k 1.1851217084862917E-4 0.10456702059306924 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1681 0.10407444325435397 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 5.572099876794681E-4 2 0.0 0.0 0.0 0.0 5.572099876794681E-4 3 0.0 0.0 0.0 0.0 5.572099876794681E-4 4 0.0 0.0 0.0 0.0 5.572099876794681E-4 5 0.0 0.0 0.0 0.0 6.191222085327422E-4 6 0.0 0.0 0.0 0.0 8.667710919458392E-4 7 0.0 0.0 0.0 0.0 8.667710919458392E-4 8 0.0 0.0 0.0 0.0 8.667710919458392E-4 9 0.0 0.0 0.0 0.0 8.667710919458392E-4 10 0.0 0.0 0.0 0.0 0.0011144199753589362 11 0.0 0.0 0.0 0.0 0.0011763321962122103 12 0.0 0.0 0.0 0.0 0.0031575232635169858 13 0.0 0.0 0.0 0.0 0.004024294355462824 14 0.0 0.0 0.0 0.0 0.004024294355462824 15 0.0 0.0 0.0 1.2382444170654845E-4 0.004891065447408664 16 0.0 0.0 0.0 1.857366625598227E-4 0.004891065447408664 17 0.0 0.0 0.0 1.857366625598227E-4 0.004952977668261938 18 0.0 0.0 0.0 2.476488834130969E-4 0.005014889889115213 19 0.0 0.0 0.0 3.095611042663711E-4 0.0051387143308217606 20 0.0 0.0 0.0 3.714733251196454E-4 0.005448275435088132 21 0.0 0.0 0.0 4.333855459729196E-4 0.0057578365393545035 22 0.0 0.0 0.0 5.572099876794681E-4 0.005881660981061051 23 0.0 0.0 0.0 5.572099876794681E-4 0.005881660981061051 24 0.0 0.0 0.0 8.048588710925649E-4 0.005881660981061051 25 0.0 0.0 0.0 0.0010525077545056618 0.005881660981061051 26 0.0 0.0 0.0 0.0012382444170654845 0.006067397643620874 27 0.0 0.0 0.0 0.0016097177421851299 0.006191222085327423 28 0.0 0.0 0.0 0.0022288399507178723 0.006253134306180697 29 0.0 0.0 0.0 0.0029098743801038887 0.006253134306180697 30 0.0 0.0 0.0 0.005324450993381583 0.006253134306180697 31 0.0 0.0 0.0 0.010277428661643521 0.0063150465270339715 32 0.0 0.0 0.0 0.014054074133693249 0.006500783189593794 33 0.0 0.0 0.0 0.01857366625598227 0.006500783189593794 34 0.0 0.0 0.0 0.023217082819977836 0.006748432073006891 35 0.0 0.0 0.0 0.02897491935933234 0.006810344293860165 36 0.0 0.0 0.0 0.03869513803329639 0.006810344293860165 37 0.0 0.0 0.0 0.05219200217931017 0.006810344293860165 38 0.0 0.0 0.0 0.06785579405518856 0.00687225651471344 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 2790 0.0 22.714823 1 GGTATCA 1400 0.0 17.761168 1 GTATAGG 295 0.0 17.15643 1 TATCAAC 3780 0.0 16.994875 2 AACGCAG 3765 0.0 16.88676 6 CGTATAT 145 1.2502824E-7 16.689304 10 TCAACGC 3875 0.0 16.464169 4 ATCAACG 3890 0.0 16.457235 3 CAACGCA 3975 0.0 16.10532 5 GACGGAC 335 0.0 15.760862 7 ACGGACC 340 0.0 14.882039 8 GTCTAAT 120 1.1791319E-4 14.66999 1 GTATACA 225 4.2564352E-10 14.66999 1 TACGACG 225 4.274625E-10 14.666358 5 GCGCAAT 165 5.4214433E-7 14.666357 35 CGTCGTA 195 1.517219E-8 14.666357 10 TACATCG 170 7.596718E-7 14.234994 5 AGCGTAT 155 4.569627E-6 14.193249 8 CCCTATA 140 2.7518858E-5 14.146063 1 GGCGTTA 280 3.6379788E-12 14.143435 42 >>END_MODULE