##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062259_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 96433 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.034770254995696 32.0 32.0 32.0 21.0 32.0 2 28.62612383727562 32.0 32.0 32.0 14.0 32.0 3 30.35892277539846 32.0 32.0 32.0 21.0 32.0 4 30.940943452967346 32.0 32.0 32.0 32.0 32.0 5 30.64649030933394 32.0 32.0 32.0 32.0 32.0 6 34.17798886273371 36.0 36.0 36.0 32.0 36.0 7 34.226924393101946 36.0 36.0 36.0 32.0 36.0 8 34.049433285286156 36.0 36.0 36.0 32.0 36.0 9 34.423952381446185 36.0 36.0 36.0 32.0 36.0 10 33.923252413592856 36.0 36.0 36.0 32.0 36.0 11 34.61443696659857 36.0 36.0 36.0 32.0 36.0 12 34.23761575394315 36.0 36.0 36.0 32.0 36.0 13 34.44789646697707 36.0 36.0 36.0 32.0 36.0 14 34.322182240519325 36.0 36.0 36.0 32.0 36.0 15 34.21411757385957 36.0 36.0 36.0 32.0 36.0 16 34.26460858834631 36.0 36.0 36.0 32.0 36.0 17 34.20700382649093 36.0 36.0 36.0 32.0 36.0 18 34.24070598239192 36.0 36.0 36.0 32.0 36.0 19 34.233415946823186 36.0 36.0 36.0 32.0 36.0 20 34.29300135845613 36.0 36.0 36.0 32.0 36.0 21 34.26056432963819 36.0 36.0 36.0 32.0 36.0 22 34.20108261694648 36.0 36.0 36.0 32.0 36.0 23 34.14819615691724 36.0 36.0 36.0 32.0 36.0 24 34.11125859404976 36.0 36.0 36.0 32.0 36.0 25 34.09323571806332 36.0 36.0 36.0 32.0 36.0 26 34.04520236848382 36.0 36.0 36.0 32.0 36.0 27 33.948513475677416 36.0 36.0 36.0 32.0 36.0 28 33.9316105482563 36.0 36.0 36.0 32.0 36.0 29 33.875685709248906 36.0 36.0 36.0 32.0 36.0 30 33.83892443458152 36.0 36.0 36.0 32.0 36.0 31 33.85873093235718 36.0 36.0 36.0 32.0 36.0 32 33.79830555930024 36.0 36.0 36.0 32.0 36.0 33 33.756743023653726 36.0 36.0 36.0 32.0 36.0 34 33.74101189426856 36.0 36.0 36.0 32.0 36.0 35 33.72831914386154 36.0 36.0 36.0 32.0 36.0 36 33.635570810822024 36.0 36.0 36.0 27.0 36.0 37 33.641222403119265 36.0 36.0 36.0 27.0 36.0 38 33.656932792716184 36.0 36.0 36.0 27.0 36.0 39 33.57707423807203 36.0 36.0 36.0 27.0 36.0 40 33.53023342631672 36.0 36.0 36.0 21.0 36.0 41 33.49314031503739 36.0 36.0 36.0 21.0 36.0 42 33.43030912654382 36.0 36.0 36.0 21.0 36.0 43 33.43042319537918 36.0 36.0 36.0 21.0 36.0 44 33.34449825267284 36.0 36.0 36.0 21.0 36.0 45 33.280588595190444 36.0 36.0 36.0 21.0 36.0 46 33.2461086972302 36.0 36.0 36.0 21.0 36.0 47 33.284301017286616 36.0 36.0 36.0 21.0 36.0 48 33.205811288666744 36.0 36.0 36.0 21.0 36.0 49 33.15231300488422 36.0 36.0 36.0 21.0 36.0 50 32.525504754596454 36.0 32.0 36.0 14.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 20 2.0 21 3.0 22 14.0 23 34.0 24 89.0 25 208.0 26 474.0 27 931.0 28 1600.0 29 2888.0 30 4597.0 31 7326.0 32 11268.0 33 18486.0 34 27080.0 35 21433.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.68671699991703 19.453662988467602 13.4043391686717 25.45528084294367 2 18.129400906366342 21.120202428729947 36.09806178639206 24.65233487851165 3 21.774703680275426 23.095828191594165 28.740161562950444 26.38930656517997 4 15.742536268704695 17.19743241421505 35.707693424450135 31.352337892630118 5 19.702798834423902 32.84041769933529 31.4498148973899 16.006968568850912 6 34.552487219105494 36.982153412213655 15.012495722418674 13.452863646262173 7 29.53242147397675 30.581854759262907 19.37511018012506 20.51061358663528 8 27.679321394128564 33.68556407039084 17.88599338400755 20.749121151473044 9 25.51512449057895 14.007652981863055 17.806145199257514 42.67107732830048 10 15.860753061711238 26.379973660468924 31.079609677185193 26.67966360063464 11 37.65930749847044 20.815488473862683 21.233395207034935 20.29180882063194 12 23.591509130691776 23.60602698246451 28.301515041531427 24.50094884531229 13 29.115551730216833 19.256893387118517 24.59946283948441 27.02809204318024 14 22.99835118683438 18.695882115043606 25.067145064448894 33.23862163367312 15 25.443572221127624 26.428712162848818 21.731150124957225 26.396565491066337 16 25.52653137411467 26.28249665570915 23.255524561094234 24.935447409081952 17 23.59462009892879 26.928541059595783 24.55590928416621 24.920929557309222 18 24.634720479503905 25.519272448228303 25.506828575280245 24.339178496987547 19 24.948928271442348 25.676894838903696 25.466385988199058 23.907790901454895 20 25.084773884458638 24.98522290087418 24.68553296070847 25.244470253958706 21 25.583565791793266 24.974853006750802 25.153215185672956 24.288366015782977 22 24.85041427727023 25.215434550413242 24.9966297844099 24.93752138790663 23 23.946159509711407 24.883597938465048 25.42179544346852 25.748447108355023 24 24.224575084775644 25.508394603395175 25.109145399301052 25.15788491252813 25 24.144224487467984 24.912633642010515 25.36787199402694 25.57526987649456 26 24.327771613451826 25.27039498926716 25.248618211608058 25.153215185672956 27 24.895004822000768 25.370982962263955 25.513050511754276 24.220961703981004 28 24.132817603932263 25.256914126906764 25.94236412846225 24.667904140698724 29 24.393101946429127 25.563862992958843 25.317059512822375 24.72597554778966 30 24.283181068721287 25.616749452988085 25.97969574730642 24.120373730984205 31 24.59842585007207 25.178102931569068 25.42179544346852 24.801675774890338 32 24.828637499611126 25.437350284653593 24.839007393734512 24.895004822000768 33 24.000082959152987 25.326392417533416 25.815851420157 24.857673203156597 34 24.408909905425585 25.585905093744817 25.8700431392069 24.135141861622696 35 25.40001866580942 25.161511100971655 25.13454937625087 24.303920856968052 36 23.819646801406158 25.58563977061794 25.673783870666682 24.920929557309222 37 24.98781512169323 25.140255726892804 25.57268928041812 24.29923987099584 38 24.62123961714351 25.00388871029627 25.52030943764064 24.85456223491958 39 24.810228969636636 25.84204413472706 24.794673967147833 24.55305292848847 40 24.990407847935874 25.97969574730642 25.162548090383996 23.86734831437371 41 24.304172888667665 25.499834079973454 25.65849510535922 24.53749792599967 42 25.026963122744434 26.104450989339195 25.05392624548886 23.81465964242751 43 24.386576234625515 25.26911828759878 25.646609835521538 24.697695642254164 44 24.225831207350716 26.123659593885467 25.031630473108912 24.618878725654906 45 24.556418579087637 26.20215490869119 25.25328991714283 23.988136595078345 46 24.08043056693387 25.969864462672792 25.01270338376663 24.937001586626707 47 24.37547312641938 25.86044196488754 25.60845353768938 24.155631371003704 48 25.072073006325834 26.238722389297937 24.99429638079436 23.694908223581873 49 24.384249224802183 25.941904238439438 25.1174463583851 24.556400178373277 50 24.98522290087418 25.443572221127624 25.442535231715286 24.128669646282912 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 10.0 1 7.0 2 4.0 3 6.5 4 9.0 5 10.5 6 12.0 7 12.5 8 13.0 9 17.0 10 21.0 11 37.5 12 54.0 13 91.5 14 129.0 15 151.5 16 174.0 17 241.0 18 308.0 19 329.0 20 350.0 21 465.5 22 581.0 23 657.0 24 733.0 25 933.5 26 1134.0 27 1337.5 28 1541.0 29 1685.5 30 1830.0 31 2016.0 32 2202.0 33 2372.5 34 2543.0 35 2832.5 36 3122.0 37 3401.5 38 3681.0 39 3893.0 40 4105.0 41 4386.5 42 4668.0 43 4834.0 44 5000.0 45 5107.5 46 5215.0 47 5525.0 48 5835.0 49 6006.0 50 6177.0 51 6165.5 52 6154.0 53 6281.5 54 6409.0 55 6481.5 56 6554.0 57 6416.5 58 6279.0 59 5717.5 60 5156.0 61 4771.5 62 4387.0 63 3854.5 64 3322.0 65 2858.5 66 2395.0 67 2124.5 68 1854.0 69 1677.0 70 1500.0 71 1210.5 72 921.0 73 809.0 74 697.0 75 557.5 76 418.0 77 355.0 78 292.0 79 278.0 80 264.0 81 196.0 82 128.0 83 116.0 84 104.0 85 80.0 86 56.0 87 42.0 88 28.0 89 18.0 90 8.0 91 7.5 92 7.0 93 6.0 94 5.0 95 5.0 96 5.0 97 4.5 98 4.0 99 19.5 100 35.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0093329047110429 2 0.0041479576493524 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0020739788246762 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0010369894123381 35 0.0 36 0.0 37 0.0020739788246762 38 0.0 39 0.0010369894123381 40 0.0 41 0.0010369894123381 42 0.0051849470616905004 43 0.0072589258863667 44 0.0072589258863667 45 0.0020739788246762 46 0.0020739788246762 47 0.0 48 0.0031109682370142997 49 0.006221936474028599 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 96433.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 84.37671751371418 #Duplication Level Percentage of deduplicated Percentage of total 1 92.34824929025281 77.92042143249718 2 5.236766748190298 8.837223771945288 3 1.0299015571423304 2.6069913826179834 4 0.43875281133629107 1.4808208808188068 5 0.2531738911352268 1.068099094708243 6 0.11921294873843205 0.6035278379807743 7 0.10077795666547863 0.5952319226820695 8 0.07865596617793455 0.5309385791171072 9 0.06513697199110204 0.49464394968527375 >10 0.3097078668256173 4.632231704914293 >50 0.017205992601423182 0.9789180052471664 >100 0.0024579989430604547 0.25095143778582024 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 121 0.12547571889291012 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATGGTCGGAACTACG 121 0.12547571889291012 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 14 0.0 0.0 0.0 0.0 0.0 15 0.0 0.0 0.0 0.0 0.0010369894123381 16 0.0 0.0 0.0 0.0 0.0010369894123381 17 0.0 0.0 0.0 0.0 0.0010369894123381 18 0.0 0.0 0.0 0.0 0.0010369894123381 19 0.0 0.0 0.0 0.0 0.0010369894123381 20 0.0 0.0 0.0 0.0 0.0010369894123381 21 0.0 0.0 0.0 0.0 0.0010369894123381 22 0.0 0.0 0.0 0.0 0.0010369894123381 23 0.0 0.0 0.0 0.0 0.0010369894123381 24 0.0 0.0 0.0 0.0 0.0010369894123381 25 0.0 0.0 0.0 0.0 0.0010369894123381 26 0.0 0.0 0.0 0.0 0.0010369894123381 27 0.0 0.0 0.0 0.0 0.0010369894123381 28 0.0 0.0 0.0 0.0010369894123381 0.0010369894123381 29 0.0 0.0 0.0 0.0010369894123381 0.0010369894123381 30 0.0 0.0 0.0 0.0010369894123381 0.0010369894123381 31 0.0 0.0 0.0 0.0020739788246762 0.0010369894123381 32 0.0 0.0 0.0 0.0031109682370143 0.0010369894123381 33 0.0 0.0 0.0 0.0051849470616905004 0.0010369894123381 34 0.0 0.0 0.0 0.0051849470616905004 0.0010369894123381 35 0.0 0.0 0.0 0.0051849470616905004 0.0010369894123381 36 0.0 0.0 0.0 0.0062219364740286 0.0010369894123381 37 0.0 0.0 0.0 0.010369894123381001 0.0010369894123381 38 0.0 0.0 0.0 0.0217767776591001 0.0010369894123381 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAACGCC 30 1.2929879E-4 36.663208 4 ATAACGC 30 1.2929879E-4 36.663208 3 GCCGCAT 40 1.8040064E-5 32.996887 11 GTCGGAA 35 3.1881544E-4 31.441916 39 CTTATAG 35 3.1978815E-4 31.425608 2 AACGCCG 35 3.1978815E-4 31.425608 5 GAACAGT 35 3.1978815E-4 31.425608 6 ATCGCCA 35 3.1978815E-4 31.425608 16 TGGTCGG 35 3.1978815E-4 31.425608 37 GCGTTAT 30 0.0057072956 29.345787 43 CGTTATT 30 0.0057072956 29.345787 44 GTCTTGC 30 0.0057072956 29.345787 1 CAATACG 30 0.0057072956 29.345787 38 ACGCCGC 45 4.0338746E-5 29.330568 6 TACACAG 45 4.0338746E-5 29.330568 5 GCATCGC 45 4.0338746E-5 29.330568 14 GCGCAAT 30 0.005721799 29.330566 35 CGGTCCA 30 0.005721799 29.330566 10 CGCAATA 30 0.005721799 29.330566 36 ATACACT 30 0.005721799 29.330566 4 >>END_MODULE