##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062258_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1477678 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.281245305134135 32.0 32.0 32.0 32.0 32.0 2 31.441307916880405 32.0 32.0 32.0 32.0 32.0 3 31.566475916945368 32.0 32.0 32.0 32.0 32.0 4 31.648575670748297 32.0 32.0 32.0 32.0 32.0 5 31.618041278275783 32.0 32.0 32.0 32.0 32.0 6 35.264897359235235 36.0 36.0 36.0 36.0 36.0 7 35.264713963393916 36.0 36.0 36.0 36.0 36.0 8 35.21568366044564 36.0 36.0 36.0 36.0 36.0 9 35.30080030967505 36.0 36.0 36.0 36.0 36.0 10 35.17992282486441 36.0 36.0 36.0 36.0 36.0 11 35.29848992811695 36.0 36.0 36.0 36.0 36.0 12 35.217371443575665 36.0 36.0 36.0 36.0 36.0 13 35.260130420835935 36.0 36.0 36.0 36.0 36.0 14 35.219763710361796 36.0 36.0 36.0 36.0 36.0 15 35.19677020298062 36.0 36.0 36.0 36.0 36.0 16 35.2048457106352 36.0 36.0 36.0 36.0 36.0 17 35.185700132234494 36.0 36.0 36.0 36.0 36.0 18 35.183811358090196 36.0 36.0 36.0 36.0 36.0 19 35.17450351159048 36.0 36.0 36.0 36.0 36.0 20 35.1698022167211 36.0 36.0 36.0 36.0 36.0 21 35.16337659490092 36.0 36.0 36.0 36.0 36.0 22 35.14924970122043 36.0 36.0 36.0 36.0 36.0 23 35.113189747698755 36.0 36.0 36.0 36.0 36.0 24 35.096185366500684 36.0 36.0 36.0 36.0 36.0 25 35.08505032896206 36.0 36.0 36.0 36.0 36.0 26 35.04451781781958 36.0 36.0 36.0 36.0 36.0 27 35.02261318095011 36.0 36.0 36.0 36.0 36.0 28 35.00946755653126 36.0 36.0 36.0 36.0 36.0 29 34.98956606243038 36.0 36.0 36.0 36.0 36.0 30 34.96300750231106 36.0 36.0 36.0 36.0 36.0 31 34.967610670254274 36.0 36.0 36.0 36.0 36.0 32 34.94535345318804 36.0 36.0 36.0 36.0 36.0 33 34.92722974829428 36.0 36.0 36.0 32.0 36.0 34 34.904661232014014 36.0 36.0 36.0 32.0 36.0 35 34.903213013931314 36.0 36.0 36.0 32.0 36.0 36 34.87893235197384 36.0 36.0 36.0 32.0 36.0 37 34.86627668544838 36.0 36.0 36.0 32.0 36.0 38 34.847520231065225 36.0 36.0 36.0 32.0 36.0 39 34.829332912853815 36.0 36.0 36.0 32.0 36.0 40 34.81273051368431 36.0 36.0 36.0 32.0 36.0 41 34.79085429978656 36.0 36.0 36.0 32.0 36.0 42 34.75023719646635 36.0 36.0 36.0 32.0 36.0 43 34.75931089181811 36.0 36.0 36.0 32.0 36.0 44 34.69985950931123 36.0 36.0 36.0 32.0 36.0 45 34.68866424214206 36.0 36.0 36.0 32.0 36.0 46 34.661597452218956 36.0 36.0 36.0 32.0 36.0 47 34.63284355590325 36.0 36.0 36.0 32.0 36.0 48 34.614585180262544 36.0 36.0 36.0 32.0 36.0 49 34.600178117289424 36.0 36.0 36.0 32.0 36.0 50 34.18314747867939 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 4.0 20 17.0 21 35.0 22 116.0 23 291.0 24 704.0 25 1643.0 26 3498.0 27 6601.0 28 11636.0 29 18219.0 30 27834.0 31 41396.0 32 62982.0 33 106547.0 34 242659.0 35 953496.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.03529056566989 17.846471281906172 12.129727285404632 25.98851086701931 2 16.34187525167246 19.554146377777705 36.958003268781106 27.145975101768727 3 18.9579155875488 22.795300448746104 28.35444648443871 29.89233747926639 4 13.006496006908142 15.775166020720361 34.480201018219816 36.738136954151685 5 15.084071089912687 36.150500988713375 32.67714617122269 16.08828175015125 6 35.71182045319813 34.229560471984385 16.012779526770416 14.045839548047068 7 31.277044119219475 29.762099726733425 19.525837158027663 19.43501899601943 8 28.67336456250956 33.07175176188588 18.465051249324954 19.78983242627961 9 26.974550612515042 14.407672036803687 18.565005366527753 40.052771984153516 10 17.33654738927884 26.33087361505499 29.768569023250024 26.564009972416148 11 37.73589374681087 21.027991213241314 21.38476718202477 19.851347857923038 12 24.61246631539483 23.45233535316896 27.953248271950994 23.981950059485218 13 29.845406103359462 19.073302844056688 24.83139087135357 26.24990018123028 14 23.9098775240614 19.326741008528245 24.32282269885591 32.44055876855445 15 25.5027820675411 26.96805393326557 21.664936474658212 25.864227524535117 16 26.296940453551876 25.55035968788701 23.325167324233423 24.82753253432769 17 24.442469875033666 25.98610793420488 24.598660871989704 24.97276131877175 18 25.297172923680783 24.677550882298206 25.679191973877884 24.34608422014313 19 25.99077742241544 24.580659656569292 24.851692994008168 24.576869927007102 20 26.123029593070747 24.12367520100807 24.51672456159228 25.236570644328904 21 27.064082973421815 24.00130474974927 24.07723468847746 24.857377588351454 22 26.50523321048293 23.908659396702124 24.700239159004873 24.885868233810072 23 24.87483741383441 24.02790053042679 25.313904653111162 25.783357402627637 24 25.07386668940529 24.530982051375755 25.157376991490608 25.23777426772834 25 25.32145071043991 24.1079911969877 25.034242959891074 25.53631513268132 26 24.877442355272347 25.203969487139226 25.42553421868994 24.493053938898484 27 25.48547615067745 24.483901377368337 24.84839338608745 25.182229085866766 28 25.07391799552127 24.40447710589307 25.272747083039228 25.248857815546433 29 24.91080564563719 24.529733256094723 25.300472635334497 25.258988462933583 30 24.79384649117761 24.815908384940798 25.396488098420413 24.993757025461186 31 25.5541321444354 24.4841375380582 24.42275716313036 25.538973154376045 32 25.489961209148472 24.48933048560299 24.321498469209594 25.69920983603895 33 24.83546765759407 24.35098969799137 25.029218237052447 25.784324407362114 34 25.65236192949842 24.437813881187196 25.168965444900042 24.740858744414346 35 25.96225424247264 24.236097764327226 25.254385941167072 24.54726205203306 36 24.589084481307133 24.93570985791202 24.914866317108757 25.56033934367209 37 25.711634794072225 24.6700513110647 24.666464544473875 24.9518493503892 38 25.148103984765285 24.299745952771847 25.013974627760582 25.538175434702282 39 25.937741300003452 24.08205333656364 24.590014164162167 25.390191199270745 40 26.065912916016153 24.421236846753384 24.803458401260897 24.709391835969566 41 24.854906122095414 24.895240054572625 25.446447906966675 24.80340591636529 42 26.158281560888458 24.804347531841746 24.770847714568024 24.26652319270178 43 25.535422551701455 23.980216808403796 25.065883063146227 25.418477576748522 44 24.851128338572632 24.756448736646554 24.827576872189304 25.564846052591506 45 25.197577768964962 24.981896881932478 24.68128360920004 25.139241739902516 46 25.064917047619367 24.680794908148386 24.74576271186441 25.50852533236784 47 25.38117648014228 24.507431334093994 25.13254045918485 24.97885172657888 48 26.02878416478413 24.99556718989617 24.015746965724567 24.95990167959513 49 25.182658105174255 25.241942469802876 24.255629307591107 25.319770117431766 50 25.361856886853236 25.23043252286053 24.178428538171264 25.22928205211497 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 219.0 1 135.5 2 52.0 3 136.0 4 220.0 5 247.0 6 274.0 7 226.0 8 178.0 9 226.0 10 274.0 11 471.0 12 668.0 13 1261.0 14 1854.0 15 2320.5 16 2787.0 17 2785.5 18 2784.0 19 2596.5 20 2409.0 21 2802.5 22 3196.0 23 3840.0 24 4484.0 25 6003.0 26 7522.0 27 9700.5 28 11879.0 29 14080.0 30 16281.0 31 18722.5 32 21164.0 33 24208.0 34 27252.0 35 31905.5 36 36559.0 37 42783.0 38 49007.0 39 54577.0 40 60147.0 41 65140.5 42 70134.0 43 73714.5 44 77295.0 45 85182.0 46 93069.0 47 100730.5 48 108392.0 49 112654.5 50 116917.0 51 114296.5 52 111676.0 53 111739.5 54 111803.0 55 113562.0 56 115321.0 57 111840.5 58 108360.0 59 99077.5 60 89795.0 61 78872.0 62 67949.0 63 58616.0 64 49283.0 65 41566.0 66 33849.0 67 29397.0 68 24945.0 69 22243.0 70 19541.0 71 15091.0 72 10641.0 73 9361.5 74 8082.0 75 5938.5 76 3795.0 77 3337.5 78 2880.0 79 2431.5 80 1983.0 81 1591.0 82 1199.0 83 1011.0 84 823.0 85 626.5 86 430.0 87 300.0 88 170.0 89 109.0 90 48.0 91 34.5 92 21.0 93 20.0 94 19.0 95 18.5 96 18.0 97 19.5 98 21.0 99 15.0 100 9.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.03085922643498787 2 0.004263445757465428 3 3.383687109099547E-4 4 6.767374218199094E-5 5 0.0 6 1.3534748436398188E-4 7 0.0 8 0.0 9 0.0 10 1.3534748436398188E-4 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 5.413899374559275E-4 17 0.0 18 2.030212265459728E-4 19 0.0 20 6.767374218199094E-5 21 0.0 22 0.0 23 0.0 24 0.001082779874911855 25 1.3534748436398188E-4 26 4.060424530919456E-4 27 3.383687109099547E-4 28 0.0018271910389137552 29 4.060424530919456E-4 30 0.001150453617093846 31 4.737161952739365E-4 32 6.767374218199094E-4 33 3.383687109099547E-4 34 6.090636796379184E-4 35 1.3534748436398188E-4 36 1.3534748436398188E-4 37 0.0016241698123677824 38 0.0 39 3.383687109099547E-4 40 6.767374218199094E-5 41 9.47432390547873E-4 42 0.003925077046555475 43 0.004060424530919456 44 0.004263445757465428 45 0.00216555974982371 46 0.0015564960701857915 47 0.001082779874911855 48 0.004060424530919456 49 0.0036543820778275104 50 0.0014888223280038004 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1477678.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 52.942093606299125 #Duplication Level Percentage of deduplicated Percentage of total 1 75.16401702051466 39.79340424925548 2 14.599754997514383 15.4588319141488 3 4.513928046854121 7.169304035659498 4 1.9819998698649692 4.197248905522556 5 1.0163114385212924 2.690282765567339 6 0.6065362484768696 1.9266779305485562 7 0.4032421334738173 1.494393794346222 8 0.2922847777981552 1.2379334452709019 9 0.1969332273674258 0.9383451621729162 >10 1.0690926278765933 10.006460123682967 >50 0.07349273869543811 2.7115013627327986 >100 0.07225075119224002 7.6816144436020695 >500 0.007584951761458421 2.7865765432564826 >1k 0.0025711700886299734 1.907425324233377 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 1937 0.13108403860651643 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 1712 0.11585744661556849 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC 1693 0.11457164551411066 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCG 1672 0.11315049692828885 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 1657 0.11213539079555897 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 1647 0.11145865337373907 No Hit TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCGGCGGCGTTATT 1538 0.10408221547590206 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 6.767374218199093E-5 2 0.0 0.0 0.0 0.0 6.767374218199093E-5 3 0.0 0.0 0.0 0.0 6.767374218199093E-5 4 0.0 0.0 0.0 6.767374218199093E-5 6.767374218199093E-5 5 0.0 0.0 0.0 6.767374218199093E-5 6.767374218199093E-5 6 0.0 0.0 0.0 6.767374218199093E-5 1.3534748436398186E-4 7 0.0 0.0 0.0 6.767374218199093E-5 1.3534748436398186E-4 8 0.0 0.0 0.0 6.767374218199093E-5 2.030212265459728E-4 9 0.0 0.0 0.0 6.767374218199093E-5 2.706949687279637E-4 10 0.0 0.0 0.0 6.767374218199093E-5 2.706949687279637E-4 11 0.0 0.0 0.0 6.767374218199093E-5 2.706949687279637E-4 12 0.0 0.0 0.0 1.3534748436398186E-4 3.383687109099547E-4 13 0.0 0.0 0.0 1.3534748436398186E-4 3.383687109099547E-4 14 0.0 0.0 0.0 1.3534748436398186E-4 3.383687109099547E-4 15 0.0 0.0 0.0 1.3534748436398186E-4 4.060424530919456E-4 16 0.0 0.0 0.0 1.3534748436398186E-4 4.060424530919456E-4 17 0.0 0.0 0.0 1.3534748436398186E-4 4.060424530919456E-4 18 0.0 0.0 0.0 1.3534748436398186E-4 4.060424530919456E-4 19 0.0 0.0 0.0 1.3534748436398186E-4 4.060424530919456E-4 20 0.0 0.0 0.0 1.3534748436398186E-4 6.090636796379184E-4 21 0.0 0.0 0.0 2.030212265459728E-4 6.090636796379184E-4 22 0.0 0.0 0.0 2.030212265459728E-4 6.090636796379184E-4 23 0.0 0.0 0.0 2.706949687279637E-4 6.767374218199094E-4 24 0.0 0.0 0.0 3.383687109099547E-4 6.767374218199094E-4 25 0.0 0.0 0.0 4.060424530919456E-4 6.767374218199094E-4 26 0.0 0.0 0.0 6.090636796379184E-4 6.767374218199094E-4 27 0.0 0.0 0.0 8.797586483658822E-4 6.767374218199094E-4 28 0.0 0.0 0.0 0.0013534748436398187 7.444111640019003E-4 29 0.0 0.0 0.0 0.0024362547185516736 7.444111640019003E-4 30 0.0 0.0 0.0 0.0044664669840114015 7.444111640019003E-4 31 0.0 0.0 0.0 0.009745018874206694 7.444111640019003E-4 32 0.0 0.0 0.0 0.015429613217493933 7.444111640019003E-4 33 0.0 0.0 0.0 0.020572817623325246 7.444111640019003E-4 34 0.0 0.0 0.0 0.02740786558370633 8.120849061838912E-4 35 0.0 0.0 0.0 0.03498732470808932 8.120849061838912E-4 36 0.0 0.0 0.0 0.045070712293205965 8.120849061838912E-4 37 0.0 0.0 0.0 0.06009428305760795 8.120849061838912E-4 38 0.0 0.0 0.0 0.08147918558711709 8.120849061838912E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 815 0.0 27.001486 1 GTATCAA 1810 0.0 26.869461 1 CGCAATA 350 0.0 20.114517 36 TACCGTC 555 0.0 19.818707 7 ATACCGT 565 0.0 19.467934 6 CGTCGTA 555 0.0 19.42299 10 CAATACG 375 0.0 19.361534 38 GATATAC 320 0.0 19.255436 1 ATACGAA 370 0.0 19.029177 40 TAGGACG 165 8.367351E-11 18.665619 4 ACCGTCG 550 0.0 18.398968 8 TACGAAT 385 0.0 18.28778 41 GTCCTAC 435 0.0 18.212036 1 CGAATGC 390 0.0 18.055157 43 TAGCGGC 390 0.0 18.050268 30 GCGCAAT 395 0.0 17.82299 35 TTAATAC 235 0.0 17.786234 3 CCGTCGT 570 0.0 17.75339 9 ACGCGGG 75 0.0012894915 17.60318 42 AATACGA 415 0.0 16.965199 39 >>END_MODULE