##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062257_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2806095 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.148815702960878 32.0 32.0 32.0 32.0 32.0 2 31.230338245854114 32.0 32.0 32.0 32.0 32.0 3 31.443890531147378 32.0 32.0 32.0 32.0 32.0 4 31.562840531058285 32.0 32.0 32.0 32.0 32.0 5 31.486791074429057 32.0 32.0 32.0 32.0 32.0 6 35.12889371172395 36.0 36.0 36.0 36.0 36.0 7 35.14344525042809 36.0 36.0 36.0 36.0 36.0 8 35.07152395054337 36.0 36.0 36.0 36.0 36.0 9 35.20790529187358 36.0 36.0 36.0 36.0 36.0 10 35.03114221008198 36.0 36.0 36.0 36.0 36.0 11 35.2057895402686 36.0 36.0 36.0 36.0 36.0 12 35.11328946454058 36.0 36.0 36.0 36.0 36.0 13 35.16549332791655 36.0 36.0 36.0 36.0 36.0 14 35.11730750384431 36.0 36.0 36.0 36.0 36.0 15 35.074768316824624 36.0 36.0 36.0 36.0 36.0 16 35.10296372717246 36.0 36.0 36.0 36.0 36.0 17 35.08252001446851 36.0 36.0 36.0 36.0 36.0 18 35.07589835696938 36.0 36.0 36.0 36.0 36.0 19 35.07125061696058 36.0 36.0 36.0 36.0 36.0 20 35.076434689488416 36.0 36.0 36.0 36.0 36.0 21 35.06646603197682 36.0 36.0 36.0 36.0 36.0 22 35.04668088571484 36.0 36.0 36.0 36.0 36.0 23 35.01322157660378 36.0 36.0 36.0 36.0 36.0 24 35.00270732102798 36.0 36.0 36.0 36.0 36.0 25 34.987520023377684 36.0 36.0 36.0 36.0 36.0 26 34.942164466990604 36.0 36.0 36.0 32.0 36.0 27 34.92395802708034 36.0 36.0 36.0 32.0 36.0 28 34.90491697536969 36.0 36.0 36.0 32.0 36.0 29 34.88402744739576 36.0 36.0 36.0 32.0 36.0 30 34.861680377891695 36.0 36.0 36.0 32.0 36.0 31 34.86132151619956 36.0 36.0 36.0 32.0 36.0 32 34.83646740399024 36.0 36.0 36.0 32.0 36.0 33 34.811566251320784 36.0 36.0 36.0 32.0 36.0 34 34.80639607711072 36.0 36.0 36.0 32.0 36.0 35 34.7933227492298 36.0 36.0 36.0 32.0 36.0 36 34.763430675012785 36.0 36.0 36.0 32.0 36.0 37 34.7596724273412 36.0 36.0 36.0 32.0 36.0 38 34.7457869387886 36.0 36.0 36.0 32.0 36.0 39 34.72563936716326 36.0 36.0 36.0 32.0 36.0 40 34.7115928006714 36.0 36.0 36.0 32.0 36.0 41 34.68114265554089 36.0 36.0 36.0 32.0 36.0 42 34.65807109167722 36.0 36.0 36.0 32.0 36.0 43 34.64849479436726 36.0 36.0 36.0 32.0 36.0 44 34.61156696405503 36.0 36.0 36.0 32.0 36.0 45 34.587478328424375 36.0 36.0 36.0 32.0 36.0 46 34.578129036971305 36.0 36.0 36.0 32.0 36.0 47 34.545396004055455 36.0 36.0 36.0 32.0 36.0 48 34.519170234792476 36.0 36.0 36.0 32.0 36.0 49 34.504472941935326 36.0 36.0 36.0 32.0 36.0 50 34.043054850245625 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 2.0 20 17.0 21 49.0 22 152.0 23 413.0 24 1124.0 25 2760.0 26 6097.0 27 11978.0 28 21450.0 29 35912.0 30 56187.0 31 87706.0 32 139117.0 33 246620.0 34 556033.0 35 1640478.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.727413372402864 17.149777827684115 12.225590899936014 25.897217899977008 2 16.28770586069738 18.954170101316375 37.60195697519889 27.156167062787357 3 19.335445406241426 22.20032144371706 27.982423942211405 30.481809207830114 4 13.014888310940403 15.237550844697289 34.87509684279999 36.872464001562314 5 15.191116192116159 36.0467967217064 32.90103610214056 15.861050984036885 6 36.12662298554503 34.30241467320767 15.75054150003528 13.82042084121202 7 31.59005664455409 29.628398183240414 19.290294875975334 19.49125029623017 8 28.31144348284716 33.65459829407059 18.261462993947106 19.77249522913515 9 26.82482239553543 14.75195957371365 18.192434682361075 40.23078334838984 10 15.970277545941084 26.973116367448846 31.233308648961867 25.8232974376482 11 37.562199426605304 21.338229817593486 21.424149930775688 19.675420825025526 12 24.444004924993628 23.154062852469355 28.532925649345444 23.86900657319157 13 29.415005550417927 19.469547538483194 24.94021050605913 26.175236405039744 14 23.439691100978404 18.891484429429507 25.068146302958382 32.6006781666337 15 25.3083733800887 27.028949483178582 21.824421482522865 25.838255654209853 16 25.865230828004414 26.04430677473707 23.297228296351626 24.79323410090689 17 24.361684119746478 25.899016248558944 24.879877552256787 24.859422079437795 18 24.689203101964193 25.608773479710045 25.465442520971326 24.236580897354436 19 25.3801457185163 25.108273240927335 25.356874945431287 24.154706095125075 20 25.78317160176616 24.588234874861463 25.009390290404088 24.619203232968296 21 26.05036536539212 24.444931479511563 24.8836906804652 24.621012474631115 22 25.716235551540485 24.146295831039218 25.224627106352422 24.91284151106787 23 24.799908484792546 24.469270597425385 25.172597752531907 25.558223165250165 24 24.54071837914063 24.797519089886308 25.45188692928572 25.209875601687344 25 24.948968100786576 24.508033960446003 25.406437716849933 25.136560221917488 26 24.731690141848926 24.9679624701185 25.41285292956305 24.887494458469526 27 24.94221480341629 24.945742854271543 25.13718415926548 24.974858183046685 28 25.104942629461913 24.592515405068394 25.316948301477836 24.985593663991857 29 24.720410878940815 24.977994228251347 25.457524049546663 24.844070843261175 30 25.004098278865428 24.99960799071722 25.1608307175623 24.83546301285505 31 24.99760342256204 24.71632185054979 25.11413588683165 25.17193884005652 32 25.116149782169046 24.927950963534474 24.900653047406074 25.05524620689041 33 24.911674251360434 24.697283408586323 25.006503711570193 25.38453862848305 34 25.10029118923594 24.790535120358335 25.276088093029454 24.833085597376268 35 25.284978894081966 24.771808409224953 25.247738397090608 24.69547429960247 36 24.79294135004271 25.0133905232514 25.152979823519495 25.040688303186393 37 25.392250812441265 24.65979745898949 25.16677363795144 24.781178090617807 38 25.066863381318168 24.54061605184429 25.21635938911548 25.17616117772207 39 25.287964197716526 24.923042053713402 24.874468920678613 24.914524827891455 40 25.365428277272546 24.791177477850862 24.985326562823516 24.858067682053075 41 24.721746270231126 25.053847513534933 25.33231506532976 24.892091150904182 42 25.444134509257605 24.87880274971552 25.092027229154485 24.585035511872395 43 25.14958258715776 24.325270182378674 25.26900631687738 25.25614091358619 44 24.800648900080862 24.982581836856227 25.096196372103996 25.120572890958915 45 25.151895608008303 24.968327239927884 24.868221717517113 25.011555434546707 46 24.803601389579864 24.900072272978033 25.018852270896797 25.27747406654531 47 24.99443168830854 25.00284206628732 25.111535510504595 24.891190734899542 48 25.26180590030403 25.096338512846263 24.714405712634147 24.92744987421556 49 25.002726314386457 24.96972543697652 24.939753797773758 25.08779445086326 50 25.12555919412611 25.14583683024554 24.755715068208055 24.972888907420295 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 25.0 1 32.0 2 39.0 3 141.0 4 243.0 5 280.5 6 318.0 7 273.5 8 229.0 9 323.0 10 417.0 11 670.5 12 924.0 13 1706.0 14 2488.0 15 3374.0 16 4260.0 17 4260.0 18 4260.0 19 4347.0 20 4434.0 21 5405.0 22 6376.0 23 8019.0 24 9662.0 25 12680.0 26 15698.0 27 19230.5 28 22763.0 29 27229.0 30 31695.0 31 36978.0 32 42261.0 33 48267.0 34 54273.0 35 62680.5 36 71088.0 37 80667.5 38 90247.0 39 102759.0 40 115271.0 41 127052.0 42 138833.0 43 147842.0 44 156851.0 45 172267.0 46 187683.0 47 197511.0 48 207339.0 49 215738.0 50 224137.0 51 226191.5 52 228246.0 53 228469.5 54 228693.0 55 223002.0 56 217311.0 57 205604.0 58 193897.0 59 179095.0 60 164293.0 61 143834.0 62 123375.0 63 106336.5 64 89298.0 65 74983.0 66 60668.0 67 50983.0 68 41298.0 69 34342.0 70 27386.0 71 21389.5 72 15393.0 73 13180.0 74 10967.0 75 8161.0 76 5355.0 77 4370.0 78 3385.0 79 2807.0 80 2229.0 81 1727.5 82 1226.0 83 951.0 84 676.0 85 491.0 86 306.0 87 217.0 88 128.0 89 92.5 90 57.0 91 49.5 92 42.0 93 29.0 94 16.0 95 16.5 96 17.0 97 14.5 98 12.0 99 9.5 100 7.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.029934838271690734 2 0.0047040460141228296 3 1.7818356114101625E-4 4 3.563671222820325E-5 5 3.563671222820325E-5 6 3.563671222820325E-5 7 0.0 8 0.0 9 0.0 10 3.563671222820325E-5 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 8.196443812486748E-4 17 0.0 18 7.12734244564065E-5 19 0.0 20 1.7818356114101625E-4 21 0.0 22 0.0 23 1.42546848912813E-4 24 9.97827942389691E-4 25 2.4945698559742275E-4 26 3.9200383451023574E-4 27 4.632772589666422E-4 28 0.0013541950646717234 29 4.632772589666422E-4 30 0.0013898317768999268 31 3.563671222820325E-4 32 7.12734244564065E-4 33 1.7818356114101625E-4 34 5.70187395651252E-4 35 3.563671222820325E-4 36 2.138202733692195E-4 37 0.0016392887624973496 38 0.0 39 6.058241078794553E-4 40 1.42546848912813E-4 41 8.196443812486748E-4 42 0.0047040460141228296 43 0.00427640546738439 44 0.004133858618471577 45 0.001995655884779382 46 0.0023876597192896178 47 0.0013541950646717234 48 0.0037062180717331375 49 0.0038844016328741546 50 0.001710562186953756 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 2806095.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 42.72497211180948 #Duplication Level Percentage of deduplicated Percentage of total 1 64.81677176598485 27.692947660792232 2 16.424641317811247 14.034846844999185 3 7.1930422942136225 9.219675942580292 4 3.669202991502999 6.270663819381342 5 2.1221225848585443 4.533381412796118 6 1.3482039781168713 3.4561186419644354 7 0.8767886910574502 2.622254066136564 8 0.6195011937150264 2.1174536979765746 9 0.45931323073288416 1.7661730476282829 >10 2.2444402830906474 17.143909235336107 >50 0.15081967237240287 4.41442638753844 >100 0.07112797377595181 5.324156417948423 >500 0.003018017075561814 0.8664008990809012 >1k 0.001006005691840349 0.5375919258409679 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.138202733692195E-4 2 0.0 0.0 0.0 0.0 2.138202733692195E-4 3 0.0 0.0 0.0 0.0 2.138202733692195E-4 4 0.0 0.0 0.0 3.563671222820325E-5 2.138202733692195E-4 5 0.0 0.0 0.0 3.563671222820325E-5 2.4945698559742275E-4 6 0.0 0.0 0.0 3.563671222820325E-5 2.4945698559742275E-4 7 0.0 0.0 0.0 3.563671222820325E-5 2.4945698559742275E-4 8 0.0 0.0 0.0 3.563671222820325E-5 2.4945698559742275E-4 9 0.0 0.0 0.0 7.12734244564065E-5 2.4945698559742275E-4 10 0.0 0.0 0.0 7.12734244564065E-5 3.2073041005382924E-4 11 0.0 0.0 0.0 7.12734244564065E-5 3.2073041005382924E-4 12 0.0 0.0 0.0 7.12734244564065E-5 7.483709567922683E-4 13 0.0 0.0 0.0 7.12734244564065E-5 0.0011047380790743008 14 0.0 0.0 0.0 7.12734244564065E-5 0.0011047380790743008 15 0.0 0.0 0.0 1.0691013668460975E-4 0.0013185583524435202 16 0.0 0.0 0.0 1.0691013668460975E-4 0.0013185583524435202 17 0.0 0.0 0.0 1.42546848912813E-4 0.0013541950646717236 18 0.0 0.0 0.0 1.42546848912813E-4 0.0013541950646717236 19 0.0 0.0 0.0 1.42546848912813E-4 0.0013541950646717236 20 0.0 0.0 0.0 3.2073041005382924E-4 0.0014611052013563332 21 0.0 0.0 0.0 4.27640546738439E-4 0.001568015338040943 22 0.0 0.0 0.0 6.058241078794553E-4 0.0016392887624973496 23 0.0 0.0 0.0 8.909178057050813E-4 0.0016392887624973496 24 0.0 0.0 0.0 0.0012472849279871138 0.0016392887624973496 25 0.0 0.0 0.0 0.0017461988991819592 0.0016392887624973496 26 0.0 0.0 0.0 0.0021025660214639918 0.0017461988991819592 27 0.0 0.0 0.0 0.002458933143746024 0.0018174723236383658 28 0.0 0.0 0.0 0.0028865736904844634 0.0019243824603229756 29 0.0 0.0 0.0 0.003991311769558764 0.0019243824603229756 30 0.0 0.0 0.0 0.005452416970915097 0.0019243824603229756 31 0.0 0.0 0.0 0.009265545179332845 0.001960019172551179 32 0.0 0.0 0.0 0.013577587358945438 0.0021025660214639918 33 0.0 0.0 0.0 0.01796090296301444 0.0021025660214639918 34 0.0 0.0 0.0 0.022736222401593675 0.002173839445920398 35 0.0 0.0 0.0 0.02915083060267026 0.0022094761581486016 36 0.0 0.0 0.0 0.03670581359504935 0.0022094761581486016 37 0.0 0.0 0.0 0.04725428041459751 0.0022094761581486016 38 0.0 0.0 0.0 0.0614376918814224 0.002280749582605008 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 3195 0.0 28.312647 1 GGTATCA 1260 0.0 24.280285 1 TCAACGC 4405 0.0 20.17604 4 ATCAACG 4495 0.0 19.821012 3 GTATACG 100 1.1198917E-6 19.80852 1 TATCAAC 4615 0.0 19.49699 2 CAACGCA 4590 0.0 19.314919 5 AACGCAG 4755 0.0 18.690948 6 ATACCGT 460 0.0 18.651222 6 TCGATCG 170 1.2732926E-10 18.119629 41 CTAGCGG 365 0.0 18.08127 29 TCTAGCG 360 0.0 17.721317 28 CGCAATA 390 0.0 17.487223 36 TACCGTC 405 0.0 17.381828 7 CAAGACG 785 0.0 16.814428 4 TACGAAT 385 0.0 16.57324 41 CGTCGTA 425 0.0 16.564156 10 ACCGTCG 425 0.0 16.56386 8 ACCGTAT 355 0.0 16.111855 8 CCGTCGT 425 0.0 16.04624 9 >>END_MODULE