##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062256_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1604442 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.268574993673813 32.0 32.0 32.0 32.0 32.0 2 31.397480868738164 32.0 32.0 32.0 32.0 32.0 3 31.532458636709833 32.0 32.0 32.0 32.0 32.0 4 31.61939166389312 32.0 32.0 32.0 32.0 32.0 5 31.5886719495002 32.0 32.0 32.0 32.0 32.0 6 35.22271543627006 36.0 36.0 36.0 36.0 36.0 7 35.235187685189 36.0 36.0 36.0 36.0 36.0 8 35.17957956722649 36.0 36.0 36.0 36.0 36.0 9 35.27968477514301 36.0 36.0 36.0 36.0 36.0 10 35.15099392810709 36.0 36.0 36.0 36.0 36.0 11 35.27308060995661 36.0 36.0 36.0 36.0 36.0 12 35.20454650277168 36.0 36.0 36.0 36.0 36.0 13 35.23001641692252 36.0 36.0 36.0 36.0 36.0 14 35.19651816644042 36.0 36.0 36.0 36.0 36.0 15 35.17008093779644 36.0 36.0 36.0 36.0 36.0 16 35.1882679461146 36.0 36.0 36.0 36.0 36.0 17 35.178313083302484 36.0 36.0 36.0 36.0 36.0 18 35.17390407381507 36.0 36.0 36.0 36.0 36.0 19 35.16361264539323 36.0 36.0 36.0 36.0 36.0 20 35.16662927048781 36.0 36.0 36.0 36.0 36.0 21 35.15964491081635 36.0 36.0 36.0 36.0 36.0 22 35.14005492252135 36.0 36.0 36.0 36.0 36.0 23 35.10630424783196 36.0 36.0 36.0 36.0 36.0 24 35.09682680956993 36.0 36.0 36.0 36.0 36.0 25 35.09361385453634 36.0 36.0 36.0 36.0 36.0 26 35.047603465877856 36.0 36.0 36.0 36.0 36.0 27 35.03481334943862 36.0 36.0 36.0 36.0 36.0 28 35.01702772677354 36.0 36.0 36.0 36.0 36.0 29 34.997526242768515 36.0 36.0 36.0 36.0 36.0 30 34.98138792178215 36.0 36.0 36.0 36.0 36.0 31 34.98101146691498 36.0 36.0 36.0 36.0 36.0 32 34.95557707913405 36.0 36.0 36.0 36.0 36.0 33 34.93673127479834 36.0 36.0 36.0 36.0 36.0 34 34.92319697439982 36.0 36.0 36.0 36.0 36.0 35 34.915365591277215 36.0 36.0 36.0 32.0 36.0 36 34.891771718765774 36.0 36.0 36.0 32.0 36.0 37 34.87658637707066 36.0 36.0 36.0 32.0 36.0 38 34.87931318177909 36.0 36.0 36.0 32.0 36.0 39 34.8633381574404 36.0 36.0 36.0 32.0 36.0 40 34.845149279313304 36.0 36.0 36.0 32.0 36.0 41 34.81441522971849 36.0 36.0 36.0 32.0 36.0 42 34.804703442068956 36.0 36.0 36.0 32.0 36.0 43 34.791224612669076 36.0 36.0 36.0 32.0 36.0 44 34.75699526689029 36.0 36.0 36.0 32.0 36.0 45 34.74789179041686 36.0 36.0 36.0 32.0 36.0 46 34.726136563365955 36.0 36.0 36.0 32.0 36.0 47 34.69893333632503 36.0 36.0 36.0 32.0 36.0 48 34.678450202624965 36.0 36.0 36.0 32.0 36.0 49 34.65999518835832 36.0 36.0 36.0 32.0 36.0 50 34.24583250750105 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 1.0 20 16.0 21 33.0 22 111.0 23 251.0 24 676.0 25 1651.0 26 3545.0 27 6905.0 28 11925.0 29 19466.0 30 29774.0 31 44837.0 32 67832.0 33 117551.0 34 267914.0 35 1031953.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.59728099144184 17.74793371684081 12.445891966605299 26.208893325112047 2 15.92462530183413 19.512540218579645 37.76064943111201 26.802185048474218 3 18.741675418449486 23.02206072542671 28.533346629810495 29.702917226313314 4 13.1635418984455 15.675136293745041 34.524528511211706 36.63679329659775 5 14.667217637035183 36.643393778023764 33.35034859471392 15.339039990227132 6 35.42235011739306 34.501031201560174 16.135982732905397 13.940635948141376 7 30.918786718373113 30.382151551754443 19.74100653061937 18.958055199253074 8 28.092071885428084 34.12949798122961 18.48225115024413 19.296178983098176 9 26.884549270088915 15.159039715988488 18.351177543345287 39.60523347057731 10 16.20539490077853 27.52647183660851 31.527803141405634 24.740330121207325 11 36.71469582571386 21.80714541254841 21.83743631742375 19.640722444313973 12 24.178000825209015 23.719648326334013 28.73858949092582 23.363761357531153 13 29.414774731651256 20.07794610213395 25.10280832837834 25.404470837836456 14 23.361891548588233 19.073734045855197 25.401603797457312 32.162770608099265 15 25.028327605485273 27.225228459489344 22.18010996969663 25.56633396532876 16 25.242812845723545 26.572946694298583 23.395733674057684 24.788506785920188 17 23.970888321297995 26.5131428870598 25.14643720371319 24.36953158792901 18 24.321974423442974 26.223699513474504 25.591640188028457 23.86268587505407 19 25.219796041240507 25.590703808551506 25.564962772103943 23.624537378104037 20 25.54070436010184 25.136449902925328 25.298625372794785 24.024220364178046 21 25.363039214280864 25.023606352617517 25.308565413125194 24.30478901997643 22 25.607843723861627 24.63018295457237 25.373556663313472 24.388416658252527 23 25.027906915866648 24.856320674926657 25.41857257449791 24.697199834708787 24 24.54120606522964 25.168097709832317 25.35557932317143 24.935116901766616 25 24.812145825698252 24.859015878476924 25.620155618547575 24.70868267727725 26 24.55292700986515 25.169966268520525 25.62171379849368 24.655392923120647 27 24.781340199310286 25.35394123656145 25.27540882043688 24.589309743691384 28 25.130530117132743 24.95389296686215 25.315456872550122 24.600120043454982 29 24.829269904072028 25.39121297056343 25.249854621539196 24.52966250382534 30 24.908611663925274 25.2731677612491 25.098961180291656 24.719259394533964 31 24.699535973722835 25.122550929143284 25.40744872805692 24.770464369076965 32 24.830546980323817 25.474889166038718 25.15022497128258 24.544338882354886 33 24.843091475021158 25.250773167925466 25.262366012273457 24.643769344779916 34 25.006139251946173 25.00632623423895 25.457389851847694 24.530144661967178 35 24.81083695454353 25.205492771291592 25.42008531346841 24.56358496069647 36 24.77792819408191 25.19527111084518 25.378139109319413 24.648661585753498 37 25.111863620809906 24.91403376570438 25.40050573139393 24.573596882091785 38 24.91447176929535 25.13099577983858 25.283759265688172 24.67077318517789 39 24.91032601751533 25.312028062424936 25.264035731225494 24.513610188834242 40 25.074589841570987 25.136418229152707 25.1304971638097 24.658494765466603 41 24.667075537671604 25.216371294762336 25.37368690702797 24.74286626053809 42 24.857123089494642 25.12202738424773 25.243010733922024 24.7778387923356 43 24.80208730036544 24.941768383707238 25.417594082159408 24.83855023376792 44 24.693711932145412 25.121979191858244 25.365501267785774 24.818807608210562 45 24.747835181472034 25.233497485363753 25.291275842102408 24.727391491061805 46 24.95736734637909 25.006045858773724 25.2193337837602 24.817253011086983 47 24.7663175687678 25.433037837325738 25.269178102256202 24.53146649165026 48 24.722463401818644 25.420426419377417 25.12211859637007 24.73499158243387 49 24.75869213192369 25.240248270050397 25.17916556032167 24.821894037704237 50 24.694576770445018 25.485707233735955 25.199122669786394 24.620593326032637 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 59.0 1 66.5 2 74.0 3 212.0 4 350.0 5 366.0 6 382.0 7 284.0 8 186.0 9 256.5 10 327.0 11 616.5 12 906.0 13 1595.0 14 2284.0 15 2799.0 16 3314.0 17 2989.5 18 2665.0 19 2473.0 20 2281.0 21 2805.5 22 3330.0 23 4347.5 24 5365.0 25 6997.5 26 8630.0 27 10813.5 28 12997.0 29 15572.5 30 18148.0 31 21988.5 32 25829.0 33 30594.5 34 35360.0 35 41247.0 36 47134.0 37 51705.0 38 56276.0 39 63769.5 40 71263.0 41 78231.0 42 85199.0 43 90713.5 44 96228.0 45 103074.0 46 109920.0 47 114647.0 48 119374.0 49 122948.0 50 126522.0 51 129102.5 52 131683.0 53 131241.5 54 130800.0 55 125498.0 56 120196.0 57 112080.5 58 103965.0 59 95263.5 60 86562.0 61 75929.5 62 65297.0 63 56944.5 64 48592.0 65 40473.0 66 32354.0 67 26295.5 68 20237.0 69 16293.0 70 12349.0 71 9635.5 72 6922.0 73 5827.0 74 4732.0 75 3771.5 76 2811.0 77 2264.5 78 1718.0 79 1365.0 80 1012.0 81 745.0 82 478.0 83 333.0 84 188.0 85 128.5 86 69.0 87 44.5 88 20.0 89 16.0 90 12.0 91 12.0 92 12.0 93 12.0 94 12.0 95 9.5 96 7.0 97 8.0 98 9.0 99 5.5 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.029605308262935025 2 0.005235465040182194 3 4.3628875334851617E-4 4 1.8698089429222122E-4 5 0.0 6 1.8698089429222122E-4 7 0.0 8 0.0 9 0.0 10 6.232696476407374E-5 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0010595584009892535 17 0.0 18 2.4930785905629495E-4 19 0.0 20 4.3628875334851617E-4 21 6.232696476407374E-5 22 0.0 23 6.232696476407374E-5 24 0.0011218853657533273 25 3.7396178858444245E-4 26 3.7396178858444245E-4 27 5.609426828766637E-4 28 0.001433520189573696 29 5.609426828766637E-4 30 0.0015581741191018435 31 4.3628875334851617E-4 32 9.34904471461106E-4 33 2.4930785905629495E-4 34 7.479235771688849E-4 35 3.7396178858444245E-4 36 3.7396178858444245E-4 37 0.0020567898372144335 38 6.232696476407374E-5 39 0.001184212330517401 40 6.232696476407374E-5 41 0.0014958471543377698 42 0.005547099864002563 43 0.004549868427777383 44 0.004362887533485162 45 0.002181443766742581 46 0.002368424661034802 47 0.0013088662600455486 48 0.0036772909210803506 49 0.003739617885844424 50 0.0018074819781581384 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1604442.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 47.70274539189796 #Duplication Level Percentage of deduplicated Percentage of total 1 64.31092994644918 30.67807917151652 2 16.858256081159375 16.083701951819226 3 7.393114875710684 10.580156297072405 4 3.842349749026418 7.331625271377209 5 2.157638993801434 5.146265178447037 6 1.3608418017627013 3.8949533992882692 7 0.8867856270324312 2.961147628846586 8 0.6495320972246823 2.4787571406219633 9 0.4541810794376018 1.9499115954806374 >10 2.0144092186581286 15.99669726435028 >50 0.05946441479077538 1.8781745348173273 >100 0.012101557455481514 0.8131806441068052 >500 2.630383274663325E-4 0.10759610186647348 >1k 1.3151916373316624E-4 0.09975382038932526 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 6.232696476407374E-5 2 0.0 0.0 0.0 0.0 6.232696476407374E-5 3 0.0 0.0 0.0 0.0 6.232696476407374E-5 4 0.0 0.0 0.0 0.0 6.232696476407374E-5 5 0.0 0.0 0.0 0.0 6.232696476407374E-5 6 0.0 0.0 0.0 0.0 2.4930785905629495E-4 7 0.0 0.0 0.0 0.0 2.4930785905629495E-4 8 0.0 0.0 0.0 0.0 3.7396178858444245E-4 9 0.0 0.0 0.0 0.0 3.7396178858444245E-4 10 0.0 6.232696476407374E-5 0.0 0.0 3.7396178858444245E-4 11 0.0 6.232696476407374E-5 0.0 0.0 3.7396178858444245E-4 12 0.0 6.232696476407374E-5 0.0 0.0 3.7396178858444245E-4 13 0.0 6.232696476407374E-5 0.0 0.0 3.7396178858444245E-4 14 0.0 6.232696476407374E-5 0.0 0.0 3.7396178858444245E-4 15 0.0 1.2465392952814747E-4 0.0 0.0 4.986157181125899E-4 16 0.0 1.2465392952814747E-4 0.0 0.0 5.609426828766637E-4 17 0.0 1.2465392952814747E-4 0.0 0.0 5.609426828766637E-4 18 0.0 1.2465392952814747E-4 0.0 6.232696476407374E-5 5.609426828766637E-4 19 0.0 1.8698089429222122E-4 0.0 1.2465392952814747E-4 5.609426828766637E-4 20 0.0 1.8698089429222122E-4 0.0 1.2465392952814747E-4 5.609426828766637E-4 21 0.0 1.8698089429222122E-4 0.0 1.2465392952814747E-4 6.855966124048111E-4 22 0.0 1.8698089429222122E-4 0.0 2.4930785905629495E-4 6.855966124048111E-4 23 0.0 1.8698089429222122E-4 0.0 2.4930785905629495E-4 0.0011218853657533273 24 0.0 1.8698089429222122E-4 0.0 4.3628875334851617E-4 0.0011218853657533273 25 0.0 1.8698089429222122E-4 0.0 6.855966124048111E-4 0.0011218853657533273 26 0.0 1.8698089429222122E-4 0.0 9.349044714611061E-4 0.0011218853657533273 27 0.0 1.8698089429222122E-4 0.0 0.0013088662600455486 0.001184212330517401 28 0.0 1.8698089429222122E-4 0.0 0.0018698089429222122 0.001184212330517401 29 0.0 2.4930785905629495E-4 0.0 0.002617732520091097 0.0014335201895736961 30 0.0 2.4930785905629495E-4 0.0 0.004612195392541457 0.0014335201895736961 31 0.0 2.4930785905629495E-4 0.0 0.008601121137442175 0.0014335201895736961 32 0.0 2.4930785905629495E-4 0.0 0.014085894036680665 0.0014335201895736961 33 0.0 2.4930785905629495E-4 0.0 0.019009724253042492 0.0014335201895736961 34 0.0 3.116348238203687E-4 0.0 0.02549172858850616 0.0015581741191018435 35 0.0 3.116348238203687E-4 0.0 0.03097650148774465 0.0015581741191018435 36 0.0 3.116348238203687E-4 0.0 0.04045020013188386 0.0015581741191018435 37 0.0 3.7396178858444245E-4 0.0 0.05702917275912747 0.0015581741191018435 38 0.0 3.7396178858444245E-4 0.0 0.0790305913208455 0.0017451550133940647 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGCTAGT 30 0.0057467 29.33215 34 GTATCAA 1915 0.0 28.729315 1 GGTATCA 655 0.0 28.222277 1 TATCAAC 2865 0.0 18.735134 2 TCAACGC 2865 0.0 18.65835 4 ATCAACG 2945 0.0 18.151503 3 CAACGCA 2960 0.0 18.133839 5 GTATAGG 255 0.0 18.123129 1 AGATAGT 150 9.61154E-9 17.598742 6 AACGCAG 3125 0.0 17.17637 6 TATACCG 80 0.0019896834 16.498821 5 TATAGGG 245 0.0 16.16211 2 GTGTACG 180 5.2477844E-9 15.893695 1 CATATAC 240 3.6379788E-12 15.582219 3 TATACTA 85 0.0029819296 15.528302 5 GTCCTAC 200 1.2714736E-9 15.404659 1 GTATAGA 200 1.2714736E-9 15.404659 1 ATACCGT 130 1.3704259E-5 15.229681 6 GCGTGTA 160 3.8287726E-7 15.123919 9 TACACCG 160 3.8287726E-7 15.123919 5 >>END_MODULE