##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062254_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1510105 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.277384685170897 32.0 32.0 32.0 32.0 32.0 2 31.427372268815745 32.0 32.0 32.0 32.0 32.0 3 31.560207402796493 32.0 32.0 32.0 32.0 32.0 4 31.631650117044842 32.0 32.0 32.0 32.0 32.0 5 31.612313713284838 32.0 32.0 32.0 32.0 32.0 6 35.23725502531281 36.0 36.0 36.0 36.0 36.0 7 35.24489621582605 36.0 36.0 36.0 36.0 36.0 8 35.19665255065045 36.0 36.0 36.0 36.0 36.0 9 35.28042619552945 36.0 36.0 36.0 36.0 36.0 10 35.1579035894855 36.0 36.0 36.0 36.0 36.0 11 35.280088470669256 36.0 36.0 36.0 36.0 36.0 12 35.1979617311379 36.0 36.0 36.0 36.0 36.0 13 35.23873571705279 36.0 36.0 36.0 36.0 36.0 14 35.19776306945543 36.0 36.0 36.0 36.0 36.0 15 35.17554342247725 36.0 36.0 36.0 36.0 36.0 16 35.18897626323997 36.0 36.0 36.0 36.0 36.0 17 35.16736120998209 36.0 36.0 36.0 36.0 36.0 18 35.161640415732684 36.0 36.0 36.0 36.0 36.0 19 35.15391777392963 36.0 36.0 36.0 36.0 36.0 20 35.161865565639474 36.0 36.0 36.0 36.0 36.0 21 35.150063075084184 36.0 36.0 36.0 36.0 36.0 22 35.13378473682294 36.0 36.0 36.0 36.0 36.0 23 35.100055294168286 36.0 36.0 36.0 36.0 36.0 24 35.08417096824393 36.0 36.0 36.0 36.0 36.0 25 35.07308961959599 36.0 36.0 36.0 36.0 36.0 26 35.02456253042007 36.0 36.0 36.0 36.0 36.0 27 35.0183291890299 36.0 36.0 36.0 36.0 36.0 28 34.99428715221789 36.0 36.0 36.0 36.0 36.0 29 34.97826045208777 36.0 36.0 36.0 36.0 36.0 30 34.9609974140871 36.0 36.0 36.0 36.0 36.0 31 34.96024183748812 36.0 36.0 36.0 36.0 36.0 32 34.93850361398711 36.0 36.0 36.0 36.0 36.0 33 34.90851828184133 36.0 36.0 36.0 32.0 36.0 34 34.89787465110042 36.0 36.0 36.0 32.0 36.0 35 34.8878097880611 36.0 36.0 36.0 32.0 36.0 36 34.86725227715954 36.0 36.0 36.0 32.0 36.0 37 34.85724105277448 36.0 36.0 36.0 32.0 36.0 38 34.841269977915445 36.0 36.0 36.0 32.0 36.0 39 34.82599554335626 36.0 36.0 36.0 32.0 36.0 40 34.81390896659504 36.0 36.0 36.0 32.0 36.0 41 34.79158601554197 36.0 36.0 36.0 32.0 36.0 42 34.757636720625385 36.0 36.0 36.0 32.0 36.0 43 34.75723277520437 36.0 36.0 36.0 32.0 36.0 44 34.7116664073028 36.0 36.0 36.0 32.0 36.0 45 34.69885537760619 36.0 36.0 36.0 32.0 36.0 46 34.68639134364829 36.0 36.0 36.0 32.0 36.0 47 34.65747746017661 36.0 36.0 36.0 32.0 36.0 48 34.62957211584625 36.0 36.0 36.0 32.0 36.0 49 34.62033832084524 36.0 36.0 36.0 32.0 36.0 50 34.20824777085037 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 4.0 20 13.0 21 38.0 22 113.0 23 295.0 24 805.0 25 1744.0 26 3655.0 27 6851.0 28 12067.0 29 19184.0 30 28991.0 31 42580.0 32 64556.0 33 109175.0 34 246969.0 35 973065.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.75995262484334 17.889553354018012 12.029196132618642 26.32129788852 2 16.280706866351665 19.78907913340331 36.982474032230826 26.9477399680142 3 18.607840540361565 23.05052645520164 28.439904642076684 29.901728362360107 4 12.805872972987292 15.86314584955738 35.089437548672144 36.241543628783184 5 14.949159164428963 36.38780084828539 32.83228649663434 15.830753490651311 6 35.149460300642346 34.64247400834382 16.376663797099532 13.831401893914311 7 31.031683227325253 29.995463891583697 19.9217935176693 19.05105936342175 8 28.29637674201463 32.932610646279564 18.989474241857355 19.78153836984845 9 27.134868105197985 14.461842057340386 18.602481284413997 39.80080855304763 10 16.82334461732437 26.458839920959086 30.523791738847127 26.19402372286942 11 37.26720989600061 21.241370633167893 21.808417295486077 19.683002175345425 12 24.634594703411157 23.493547464280606 28.23090330202423 23.640954530284006 13 29.395108287172082 19.30984931511385 25.007863691597603 26.28717870611646 14 23.74517003784505 19.426331281599623 24.76337738104304 32.065121299512285 15 25.41101446588151 26.87011830303191 21.881591015194306 25.837276215892274 16 26.098438644379375 25.687339497171706 23.28782635299166 24.92639550545726 17 24.330758457193376 25.909522847749 24.74821287261482 25.01150582244281 18 25.095622553148655 24.954109120961203 25.579430290893875 24.370838034996265 19 25.71503306061499 24.905751586810187 25.13500716837571 24.244208184199113 20 25.882129348067938 24.328651953253303 24.705780294762718 25.08343840391604 21 26.69798020399933 24.112593644274597 24.471708221227292 24.717717930498782 22 26.008588806738604 24.123223219577447 24.88482588959046 24.983362084093493 23 24.62669814350658 24.18864913366951 25.33267554242917 25.85197718039474 24 24.819579812010705 24.73713417646412 25.183201486537854 25.26008452498732 25 25.130719819879477 24.241109860274154 25.231242964042117 25.396927355804248 26 24.82966326004224 25.067594995553264 25.355457298438445 24.747284445966052 27 25.306651674291984 24.689408191902395 24.816022239572057 25.187917894233564 28 25.01983330750699 24.503107770021046 25.334186264888224 25.14287265758374 29 24.840093265408427 24.799566121161593 25.315625002069403 25.04471561136058 30 24.907968634836628 24.748904530413228 25.435886636694804 24.907240198055337 31 25.293722659059213 24.630520668195043 24.648201639893568 25.427555032852172 32 25.338273419884178 24.62626523496866 24.585671762372566 25.449789582774596 33 24.864611794435078 24.435766590601165 25.06128725079498 25.63833436416878 34 25.452821292533944 24.519034652285164 25.25296539009647 24.775178665084418 35 25.900121912375397 24.272879761022605 25.2670516740271 24.559946652574894 36 24.828604179455546 24.931709865763946 24.95799949804682 25.281686456733688 37 25.709468542601222 24.667996402825292 24.794149160902048 24.828385893671438 38 24.983825628019243 24.35876975442105 25.24784700401628 25.409557613543427 39 25.615573039347804 24.421477560712987 24.58835425803773 25.37459514190148 40 25.76747974478596 24.593389201413146 24.951973538263896 24.687157515537 41 24.737879687885947 24.998394134385457 25.333142616097458 24.93058356163114 42 25.904354091447313 24.906690471964758 24.836493098141226 24.352462338446703 43 25.39871750807435 24.103510594829636 25.155013579209406 25.34275831788661 44 24.984719018679552 24.772209076936015 24.8328032173833 25.410268687001132 45 25.191432156893907 24.84230811256469 24.864360143437533 25.101899587103865 46 25.112660564067685 24.752676536868893 24.84479165493981 25.289871244123606 47 25.155520119939556 24.619063449030325 25.210947133092375 25.014469297937747 48 25.842075323383547 25.14514429664203 24.321396193103666 24.691384186870756 49 25.127330305175526 25.213751341843878 24.429339710168346 25.22957864281225 50 25.22710687234203 25.297897730057045 24.60700809624908 24.867987301351846 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 242.0 1 143.5 2 45.0 3 157.0 4 269.0 5 262.0 6 255.0 7 204.0 8 153.0 9 214.0 10 275.0 11 461.5 12 648.0 13 1266.5 14 1885.0 15 2266.5 16 2648.0 17 2654.0 18 2660.0 19 2593.0 20 2526.0 21 2980.0 22 3434.0 23 4196.0 24 4958.0 25 6411.5 26 7865.0 27 10004.0 28 12143.0 29 14491.0 30 16839.0 31 19275.0 32 21711.0 33 25110.0 34 28509.0 35 33184.5 36 37860.0 37 44907.5 38 51955.0 39 57937.0 40 63919.0 41 70007.0 42 76095.0 43 79834.5 44 83574.0 45 91025.5 46 98477.0 47 105156.5 48 111836.0 49 116391.0 50 120946.0 51 118091.5 52 115237.0 53 114706.5 54 114176.0 55 114482.0 56 114788.0 57 110549.5 58 106311.0 59 97108.0 60 87905.0 61 77178.0 62 66451.0 63 57471.5 64 48492.0 65 40735.5 66 32979.0 67 28290.0 68 23601.0 69 21135.5 70 18670.0 71 14628.5 72 10587.0 73 9252.5 74 7918.0 75 5828.0 76 3738.0 77 3354.5 78 2971.0 79 2463.5 80 1956.0 81 1522.5 82 1089.0 83 961.5 84 834.0 85 629.5 86 425.0 87 279.0 88 133.0 89 91.5 90 50.0 91 34.5 92 19.0 93 18.5 94 18.0 95 17.5 96 17.0 97 13.0 98 9.0 99 6.5 100 4.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.02999791405233411 2 0.003973233649315776 3 3.31102804109648E-4 4 6.62205608219296E-5 5 0.0 6 3.31102804109648E-4 7 0.0 8 0.0 9 0.0 10 6.62205608219296E-5 11 0.0 12 6.62205608219296E-5 13 0.0 14 0.0 15 0.0 16 4.635439257535072E-4 17 0.0 18 6.62205608219296E-5 19 0.0 20 5.959850473973665E-4 21 1.324411216438592E-4 22 0.0 23 0.0 24 0.0012581906556166625 25 3.31102804109648E-4 26 5.297644865754368E-4 27 2.648822432877184E-4 28 0.0012581906556166625 29 3.973233649315776E-4 30 0.0014568523380824514 31 4.635439257535072E-4 32 6.62205608219296E-4 33 1.986616824657888E-4 34 0.0011257495339728031 35 2.648822432877184E-4 36 2.648822432877184E-4 37 0.002052837385479818 38 0.0 39 5.297644865754368E-4 40 0.0 41 0.0010595289731508736 42 0.005098983183288579 43 0.00503276262246665 44 0.003840792527671917 45 0.002648822432877184 46 0.002516381311233325 47 7.284261690412257E-4 48 0.0037083514060280575 49 0.0037083514060280575 50 0.0015230728989043807 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1510105.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 57.84993570643682 #Duplication Level Percentage of deduplicated Percentage of total 1 79.10639014234899 45.76299583703196 2 12.845365750778612 14.862071656164161 3 3.555756969129996 6.171009361556547 4 1.4696561456881558 3.4007805415451813 5 0.7651106726216361 2.213080160973514 6 0.4662430722701809 1.6183279052640924 7 0.31354431622221574 1.2696962974201709 8 0.24219126559975546 1.1208599314885133 9 0.16291107092075918 0.8481955480769416 >10 0.9391407636161605 9.772480490208793 >50 0.07074001645313237 2.845559086934436 >100 0.05522531309553227 6.590470005083899 >500 0.0058798442387902935 2.227973403215123 >1k 0.0018446570160910725 1.2964997750366345 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 1578 0.1044960449770049 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 3.31102804109648E-4 2 0.0 0.0 0.0 0.0 3.31102804109648E-4 3 0.0 0.0 0.0 0.0 3.31102804109648E-4 4 0.0 0.0 0.0 0.0 3.973233649315776E-4 5 0.0 0.0 0.0 0.0 3.973233649315776E-4 6 0.0 0.0 0.0 0.0 3.973233649315776E-4 7 0.0 0.0 0.0 0.0 3.973233649315776E-4 8 0.0 0.0 0.0 0.0 3.973233649315776E-4 9 0.0 0.0 0.0 0.0 3.973233649315776E-4 10 0.0 0.0 0.0 0.0 3.973233649315776E-4 11 0.0 0.0 0.0 0.0 3.973233649315776E-4 12 0.0 0.0 0.0 6.62205608219296E-5 7.284261690412256E-4 13 0.0 0.0 0.0 6.62205608219296E-5 8.608672906850848E-4 14 0.0 0.0 0.0 1.986616824657888E-4 8.608672906850848E-4 15 0.0 0.0 0.0 3.973233649315776E-4 0.0010595289731508736 16 0.0 0.0 0.0 5.297644865754368E-4 0.001191970094794733 17 0.0 0.0 0.0 5.297644865754368E-4 0.001191970094794733 18 0.0 0.0 0.0 5.959850473973665E-4 0.001324411216438592 19 0.0 0.0 0.0 7.284261690412256E-4 0.001324411216438592 20 0.0 0.0 0.0 7.946467298631552E-4 0.0015892934597263105 21 0.0 0.0 0.0 9.93308412328944E-4 0.0015892934597263105 22 0.0 0.0 0.0 0.001191970094794733 0.0015892934597263105 23 0.0 0.0 0.0 0.00165551402054824 0.0015892934597263105 24 0.0 0.0 0.0 0.002185278507123677 0.0015892934597263105 25 0.0 0.0 0.0 0.0027150429936991134 0.0015892934597263105 26 0.0 0.0 0.0 0.003509689723562269 0.00165551402054824 27 0.0 0.0 0.0 0.0040394542101377055 0.00165551402054824 28 0.0 0.0 0.0 0.004767880379178932 0.0017217345813701696 29 0.0 0.0 0.0 0.006555835521371031 0.0017879551421920992 30 0.0 0.0 0.0 0.009734422440823651 0.0017879551421920992 31 0.0 0.0 0.0 0.01675380188794819 0.0017879551421920992 32 0.0 0.0 0.0 0.022779872922743784 0.0017879551421920992 33 0.0 0.0 0.0 0.02986547293069025 0.0017879551421920992 34 0.0 0.0 6.62205608219296E-5 0.03609020564795163 0.001986616824657888 35 0.0 6.62205608219296E-5 6.62205608219296E-5 0.044102893507405115 0.001986616824657888 36 0.0 6.62205608219296E-5 6.62205608219296E-5 0.05555905052959893 0.001986616824657888 37 0.0 6.62205608219296E-5 6.62205608219296E-5 0.07218041129590326 0.001986616824657888 38 0.0 6.62205608219296E-5 6.62205608219296E-5 0.09317232907645495 0.002119057946301747 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCCGATA 30 0.00574208 29.336864 39 GTATCAA 1855 0.0 24.910309 1 GGTATCA 850 0.0 23.816208 1 ACCGTCG 335 0.0 19.700603 8 CGTCGTA 360 0.0 18.944218 10 TACCGTC 350 0.0 18.856293 7 GTCGTAG 385 0.0 18.285494 11 ATACCGT 375 0.0 18.185846 6 CCGTCGT 405 0.0 17.925117 9 GTATTAG 310 0.0 17.745247 1 CGCAATA 360 0.0 17.723183 36 GTCGATA 75 0.0012906035 17.600954 36 CGTTAAG 75 0.0012911767 17.599787 31 TCAACGC 2755 0.0 16.768751 4 CGAGCCG 440 0.0 16.499802 15 CTACCGT 80 0.00198926 16.499254 4 ATCAACG 2845 0.0 16.315607 3 CAACGCA 2830 0.0 16.246616 5 CTAGCGG 370 0.0 16.05386 29 AACGCAG 2910 0.0 15.7999735 6 >>END_MODULE