SRR4062251_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR4062251_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	86393
Sequences flagged as poor quality	0
Sequence length	50
%GC	50

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC	131	0.15163265542347182	No Hit
GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC	114	0.13195513525401364	No Hit
GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATGGTCGGAACTACG	113	0.1307976340675749	No Hit
GGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAATAGGACCGCG	99	0.11459261745743289	No Hit
GTATTGCGCCGCTAGAGGTGAAATTCTTGGACCGGCGCAAGACGGACCAG	97	0.11227761508455546	No Hit
GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT	90	0.10417510677948444	No Hit
CCCCGATCCCCATCACGAATGGGGTTCAACGGGTTACCCGCGCCTGCCGG	89	0.10301760559304574	No Hit
TATCAACGCAGAGTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATG	89	0.10301760559304574	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	20	7.7942666E-4	44.024914	1
TAAGGCG	30	1.2912524E-4	36.666183	5
TTAGACT	25	0.002340904	35.19954	4
CCAATTT	25	0.002340904	35.19954	14
AACAATA	40	1.8008348E-5	32.999565	32
TGACGAA	40	1.8008348E-5	32.999565	21
ACAATAC	40	1.8008348E-5	32.999565	33
GACGAAA	40	1.8008348E-5	32.999565	22
GTATCAA	95	0.0	32.43941	1
GGAAGTT	35	3.1936163E-4	31.428158	29
CAGATAC	30	0.0057162656	29.332949	3
AACTGCA	30	0.0057162656	29.332949	7
GTTCAGG	30	0.0057162656	29.332949	6
GGCTCAT	30	0.0057162656	29.332949	20
AGTGTGG	30	0.0057162656	29.332949	10
TAACTGC	30	0.0057162656	29.332949	6
TAACAAT	45	4.026822E-5	29.332947	31
TACAGGA	45	4.026822E-5	29.332947	37
GTAGTGA	45	4.026822E-5	29.332947	17
GGAGGTA	45	4.026822E-5	29.332947	13