##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062250_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 69899 Sequences flagged as poor quality 0 Sequence length 25 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.390506301949955 32.0 32.0 32.0 32.0 32.0 2 30.148528591253093 32.0 32.0 32.0 21.0 32.0 3 30.363796334711513 32.0 32.0 32.0 21.0 32.0 4 30.25548291105738 32.0 32.0 32.0 21.0 32.0 5 30.4173164136826 32.0 32.0 32.0 27.0 32.0 6 33.82328788680811 36.0 36.0 36.0 32.0 36.0 7 33.57341306742586 36.0 36.0 36.0 21.0 36.0 8 33.38177942459835 36.0 36.0 36.0 21.0 36.0 9 33.36356743301049 36.0 36.0 36.0 21.0 36.0 10 33.333109200417745 36.0 36.0 36.0 21.0 36.0 11 33.74606217542454 36.0 36.0 36.0 27.0 36.0 12 33.53670295712385 36.0 36.0 36.0 21.0 36.0 13 33.616847165195495 36.0 36.0 36.0 27.0 36.0 14 33.51047940600009 36.0 36.0 36.0 21.0 36.0 15 33.56976494656576 36.0 36.0 36.0 21.0 36.0 16 33.5153578735032 36.0 36.0 36.0 21.0 36.0 17 33.42090730911744 36.0 36.0 36.0 21.0 36.0 18 33.524084750854804 36.0 36.0 36.0 27.0 36.0 19 33.43233808781242 36.0 36.0 36.0 21.0 36.0 20 33.23346542868997 36.0 36.0 36.0 21.0 36.0 21 33.20476687792386 36.0 36.0 36.0 21.0 36.0 22 33.20901586574915 36.0 36.0 36.0 21.0 36.0 23 33.3368145467031 36.0 36.0 36.0 21.0 36.0 24 33.36242292450536 36.0 36.0 36.0 21.0 36.0 25 33.07037296670911 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 4 1.0 5 6.0 6 13.0 7 4.0 8 14.0 9 10.0 10 2.0 11 2.0 12 4.0 13 4.0 14 97.0 15 124.0 16 116.0 17 162.0 18 201.0 19 284.0 20 376.0 21 456.0 22 605.0 23 778.0 24 946.0 25 1039.0 26 1179.0 27 1353.0 28 1542.0 29 1970.0 30 2431.0 31 3342.0 32 4379.0 33 6136.0 34 13230.0 35 29093.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.04070158371364 20.682699323309347 12.98015708379233 21.29644200918468 2 15.6726133421079 22.92450535773044 38.167928010415025 23.234953289746635 3 18.900127326571194 29.297987095666606 27.634157856335566 24.16772772142663 4 12.168600575164895 18.780135349748903 33.2751491565679 35.77611491851831 5 13.003534580214938 40.59329431462057 29.53592535882429 16.867245746340206 6 29.032950674186253 37.87752998769002 17.32129054421574 15.76822879390799 7 27.061434913361023 34.986395532006306 18.970356580266362 18.98181297436632 8 28.394460595471667 32.66071863319346 17.708049894739858 21.236770876595013 9 28.50411068778825 15.802515110716433 19.16697699733593 36.52639720415938 10 17.388252148997136 28.659025787965614 27.687679083094558 26.26504297994269 11 32.88397346818905 25.943011045370547 21.59076257467444 19.58225291176597 12 25.13536742587022 28.024638303967915 26.519123334765794 20.320870935396073 13 29.290932531155995 23.264575275748463 25.984815928950006 21.45967626414554 14 23.84130621598396 22.028072185620164 26.417931824692065 27.712689773703808 15 24.791198086042147 28.36984083778634 24.957380055298483 21.88158102087303 16 22.061161641481057 29.957745470171165 24.595001074267707 23.386091814080068 17 20.101711911754172 28.529474965976647 25.770360289377553 25.598452832891628 18 20.609046896038045 27.745151402297534 28.918268542126217 22.7275331595382 19 22.92325977689631 26.394398063952572 29.537611158048488 21.14473100110263 20 24.628447066235218 24.750150339337363 29.024082930042095 21.597319664385328 21 25.831996792301524 23.75128880742353 28.684557223049605 21.732157177225343 22 23.97599679193401 25.372364802933088 28.110678276810262 22.54096012832264 23 23.04388288352781 26.33832056696972 28.97845228720739 21.639344262295083 24 22.019846213325316 27.209072554663 28.84287698497931 21.928204247032376 25 22.41362028724029 27.37087790139897 28.61520397497029 21.600297836390453 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1985.0 1 1985.0 2 1120.5 3 256.0 4 256.0 5 256.0 6 483.5 7 711.0 8 711.0 9 711.0 10 649.5 11 588.0 12 588.0 13 588.0 14 430.5 15 273.0 16 273.0 17 273.0 18 457.5 19 642.0 20 642.0 21 642.0 22 1007.5 23 1373.0 24 1373.0 25 1373.0 26 1981.0 27 2589.0 28 2589.0 29 2589.0 30 3018.0 31 3447.0 32 3447.0 33 3447.0 34 3623.5 35 3800.0 36 3800.0 37 3800.0 38 4169.5 39 4539.0 40 4539.0 41 4539.0 42 5522.0 43 6505.0 44 6505.0 45 6505.0 46 8047.5 47 9590.0 48 9590.0 49 9590.0 50 10072.0 51 10554.0 52 10554.0 53 10554.0 54 9403.0 55 8252.0 56 8252.0 57 8252.0 58 7202.5 59 6153.0 60 6153.0 61 6153.0 62 5098.0 63 4043.0 64 4043.0 65 4043.0 66 3207.5 67 2372.0 68 2372.0 69 2372.0 70 1801.5 71 1231.0 72 1231.0 73 1231.0 74 910.5 75 590.0 76 590.0 77 590.0 78 434.5 79 279.0 80 279.0 81 279.0 82 176.5 83 74.0 84 74.0 85 74.0 86 50.0 87 26.0 88 26.0 89 26.0 90 17.0 91 8.0 92 8.0 93 8.0 94 7.0 95 6.0 96 6.0 97 6.0 98 9.5 99 13.0 100 13.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.008583813788466215 5 0.02575144136539865 6 0.052933518362208325 7 0.09871385856736149 8 0.1030057654615946 9 0.11588148614429392 10 0.14163292750969256 11 0.13734102061545944 12 0.1273265711955822 13 0.1273265711955822 14 0.11302021488147185 15 0.13734102061545944 16 0.120173393038527 17 0.13447974935263737 18 0.12160402866993804 19 0.09442195167312836 20 0.08154623099042904 21 0.09585258730453941 22 0.10729767235582768 23 0.07725432409619594 24 0.08869940914748423 25 0.08869940914748423 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 69899.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 57.306971487431866 #Duplication Level Percentage of deduplicated Percentage of total 1 75.45248021569265 43.23953132376715 2 14.589210375215316 16.721269259932185 3 4.94545272985995 8.502267557475786 4 2.054572234565744 4.709652498605131 5 1.0135556831515091 2.904190331764403 6 0.48181341588236765 1.6566760611739797 7 0.34201263199940085 1.3719795705231834 8 0.22467983124048233 1.030057654615946 9 0.15477943929899893 0.7982946823273581 >10 0.6565643957360762 6.3734817379361655 >50 0.039943081109419076 1.3977310118885822 >100 0.032453753401403 4.19748494255998 >500 0.007489327708016077 2.7410978697835446 >1k 0.0049928851386773845 4.3562854976466046 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source AAAAAAAAAAAAAAAAAAAAAAAAA 1787 2.556545873331521 No Hit GTATCAACGCAGAGTACTTTTTTTT 1258 1.7997396243150832 No Hit TATCAACGCAGAGTACTTTTTTTTT 850 1.2160402866993805 No Hit GGTATCAACGCAGAGTACTTTTTTT 538 0.7696819696991373 No Hit GTACTTTTTTTTTTTTTTTTTTTTT 528 0.7553756133850269 No Hit ACGCAGAGTACTTTTTTTTTTTTTT 489 0.6995808237599965 No Hit GTACATGGGGTGGTATCAACGCAAA 387 0.5536559893560709 No Hit GAGTACTTTTTTTTTTTTTTTTTTT 374 0.5350577261477274 No Hit GTATCAACGCAGAGTACATGGGGTG 299 0.4277600537918997 No Hit TATCAACGCAGAGTACATGGGGTGG 199 0.28469649065079616 No Hit GCAGAGTACTTTTTTTTTTTTTTTT 194 0.277543312493741 No Hit GTACATGGGTGGTATCAACGCAAAA 179 0.2560837780225754 No Hit GGTATCAACGCAGAGTACATGGGGT 162 0.23176297228858783 No Hit ATCAACGCAGAGTACTTTTTTTTTT 161 0.23033233665717676 No Hit ACGCAGAGTACATGGGGTGGTATCA 144 0.2060115309231892 No Hit TTTTTTTTTTTTTTTTTTTTTTTTT 131 0.1874132677148457 No Hit GTACATGGGAGTGGTATCAACGCAA 113 0.16166182634944706 No Hit GTATCAACGCAGAGTACATGGGTGG 102 0.14592483440392567 No Hit GAGTACATGGGGTGGTATCAACGCA 77 0.11015894361864978 No Hit ATCAACGCAGAGTACATGGGGTGGT 70 0.10014449419877253 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 625 0.0 9.570588 1 GGTGGTA 135 6.500818E-5 8.445718 9 GGTATCA 320 0.0 8.307802 1 GGGTGGT 140 9.9404286E-5 8.144085 8 ACGCAAA 130 4.0313564E-4 8.039674 19 GGGGTGG 145 1.495E-4 7.8632545 7 AACGCAA 135 6.0446945E-4 7.741908 18 AACGCAG 745 0.0 7.5246243 6 TATCAAC 845 0.0 6.9664755 2 AGTACTT 465 0.0 6.947284 13 ACTTTTT 495 0.0 6.718185 16 TACTTTT 495 0.0 6.718185 15 ATCAACG 860 0.0 6.6241612 3 GTACTTT 490 0.0 6.592831 14 CAACGCA 865 0.0 6.590589 5 TCAACGC 850 0.0 6.5903916 4 CTTTTTT 510 0.0 6.5205913 17 GAGTACT 485 0.0 6.4648924 12 AGAGTAC 900 0.0 6.43986 11 GTGGTAT 180 0.001775707 6.3342886 10 >>END_MODULE