##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062250_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 69899 Sequences flagged as poor quality 0 Sequence length 50 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.79026881643514 32.0 32.0 32.0 32.0 32.0 2 31.23904490765247 32.0 32.0 32.0 32.0 32.0 3 31.44092190160088 32.0 32.0 32.0 32.0 32.0 4 31.640438346757463 32.0 32.0 32.0 32.0 32.0 5 31.573126940299574 32.0 32.0 32.0 32.0 32.0 6 35.162534514084605 36.0 36.0 36.0 36.0 36.0 7 35.14094622240661 36.0 36.0 36.0 36.0 36.0 8 35.122948826163466 36.0 36.0 36.0 36.0 36.0 9 35.09735475471752 36.0 36.0 36.0 36.0 36.0 10 35.049128027582654 36.0 36.0 36.0 36.0 36.0 11 35.16081775132692 36.0 36.0 36.0 36.0 36.0 12 35.071059671812186 36.0 36.0 36.0 36.0 36.0 13 35.109257643170864 36.0 36.0 36.0 36.0 36.0 14 35.05486487646461 36.0 36.0 36.0 36.0 36.0 15 35.092676576202805 36.0 36.0 36.0 36.0 36.0 16 35.06586646447016 36.0 36.0 36.0 36.0 36.0 17 35.048384097054324 36.0 36.0 36.0 36.0 36.0 18 35.06105952874862 36.0 36.0 36.0 36.0 36.0 19 35.0043634386758 36.0 36.0 36.0 36.0 36.0 20 34.884476172763556 36.0 36.0 36.0 32.0 36.0 21 34.85546288215854 36.0 36.0 36.0 32.0 36.0 22 34.91360391421909 36.0 36.0 36.0 36.0 36.0 23 34.92688021287858 36.0 36.0 36.0 36.0 36.0 24 34.9261935077755 36.0 36.0 36.0 36.0 36.0 25 34.944434112075996 36.0 36.0 36.0 36.0 36.0 26 34.92510622469563 36.0 36.0 36.0 36.0 36.0 27 34.91865405799797 36.0 36.0 36.0 32.0 36.0 28 34.89914018798552 36.0 36.0 36.0 32.0 36.0 29 34.87301678135596 36.0 36.0 36.0 32.0 36.0 30 34.83014063148257 36.0 36.0 36.0 32.0 36.0 31 34.80820898725304 36.0 36.0 36.0 32.0 36.0 32 34.758894977038295 36.0 36.0 36.0 32.0 36.0 33 34.645202363410064 36.0 36.0 36.0 32.0 36.0 34 34.56262607476502 36.0 36.0 36.0 32.0 36.0 35 34.53153836249446 36.0 36.0 36.0 32.0 36.0 36 34.535916107526575 36.0 36.0 36.0 32.0 36.0 37 34.48179516159029 36.0 36.0 36.0 32.0 36.0 38 34.4523955993648 36.0 36.0 36.0 32.0 36.0 39 34.37572783587748 36.0 36.0 36.0 32.0 36.0 40 34.32705761169688 36.0 36.0 36.0 32.0 36.0 41 34.24542554256856 36.0 36.0 36.0 32.0 36.0 42 34.190603585172894 36.0 36.0 36.0 32.0 36.0 43 34.078599121589725 36.0 36.0 36.0 32.0 36.0 44 33.925249288258776 36.0 36.0 36.0 32.0 36.0 45 33.79836621410893 36.0 36.0 36.0 32.0 36.0 46 33.665045279617736 36.0 36.0 36.0 27.0 36.0 47 33.41894733830241 36.0 36.0 36.0 21.0 36.0 48 33.26744302493598 36.0 36.0 36.0 14.0 36.0 49 33.19891557819139 36.0 36.0 36.0 14.0 36.0 50 32.82486158600266 36.0 36.0 36.0 14.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 5.0 20 2.0 21 12.0 22 13.0 23 34.0 24 82.0 25 174.0 26 392.0 27 601.0 28 1065.0 29 1520.0 30 2152.0 31 2840.0 32 4039.0 33 5781.0 34 10415.0 35 40772.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.598294023357 20.48316922372338 14.120105335470576 21.79843141744905 2 15.435242946259944 22.02111829680078 38.96440222056888 23.5792365363704 3 18.472367272779298 28.41671554671741 28.855920685560594 24.254996494942706 4 11.819911586717978 16.98593685174323 35.044850427044736 36.14930113449405 5 12.631081989728035 38.74304353424227 30.953232521209173 17.672641954820527 6 29.143478447474212 37.27950328330877 17.51670267099672 16.06031559822029 7 26.81583427516846 33.960428618435174 19.727034721526774 19.496702384869597 8 28.596975636275197 30.907452181004018 18.759925034692916 21.73564714802787 9 28.260776262893607 14.06028698550766 20.31502596603671 37.36391078556203 10 17.502396314682613 27.123420935921832 28.741469835047713 26.632712914347845 11 33.52694602211763 24.29076238572798 22.17628292250247 20.006008669651926 12 25.309374955292636 26.45102218915864 27.875935278044032 20.363667577504685 13 29.70285697935593 21.800025751441364 26.970342923360853 21.526774345841858 14 24.561152520064663 20.25636990514886 28.17350748937753 27.008970085408947 15 25.057583084164293 26.040429762943674 27.0805018669795 21.82148528591253 16 22.186297371922343 28.000400577976798 26.09622455256871 23.717077497532156 17 20.17768494542125 26.00609450778981 28.21356528705704 25.6026552597319 18 20.576832286584928 24.711369261362822 32.25224967453039 22.459548777521853 19 22.96599379104136 23.21492439090688 33.070573255697504 20.748508562354253 20 24.061860684702214 22.046095080044065 32.42249531466831 21.469548920585417 21 25.446715975908095 21.286427559764803 32.071989584972606 21.194866879354496 22 23.379447488519148 22.601181705031546 32.24366586074193 21.77570494570738 23 22.5825834418232 23.292178715003075 33.03623800054364 21.08899984263008 24 22.00492145698017 23.8433145440499 32.40865260808607 21.74311139088386 25 22.02606618120431 23.645545715961603 32.62564557432868 21.702742528505414 26 21.12762700467818 24.212077426000373 32.918925878767936 21.741369690553512 27 21.479563370005295 24.3837537017697 32.57843459849211 21.5582483297329 28 20.87070975864486 24.393035466472092 32.92272915861911 21.81352561626393 29 20.807164623242105 24.820097569350065 32.408188958354195 21.964548849053635 30 20.729369348746708 24.718152683987636 32.48683758727252 22.06564037999313 31 21.00602297600824 24.45671611897166 32.5126253594472 22.0246355455729 32 20.815748437030575 25.02181719337902 32.302321921629776 21.860112447960628 33 21.19629751498591 24.92739524170589 32.11920056080917 21.757106682499032 34 21.399447774646273 24.778609136039144 31.98901271835076 21.83293037096382 35 21.505314811370692 25.017525286484787 31.81876707821285 21.658392823931674 36 21.106167470207012 25.709952932087727 31.293723801485 21.890155796220263 37 21.894447703114494 25.938854633113493 30.747220990285985 21.41947667348603 38 21.183421794303207 26.05759739052061 31.715761312751255 21.04321950242493 39 21.04465013805634 26.24501065823545 30.83592039943347 21.87441880427474 40 21.04894204495057 26.310819897280364 31.52834804503641 21.111890012732655 41 21.217757049457074 26.485357444312505 30.838781670696292 21.45810383553413 42 21.01889869669094 27.018984534828828 30.325183479019728 21.636933289460508 43 21.05496580731924 27.05370682995222 29.764800137342984 22.126527225385562 44 21.083578929296976 27.32410083264185 29.945062805802742 21.647257432258435 45 21.482731980886435 27.123808978797676 29.719019142178603 21.674439898137283 46 22.103636727803373 27.321239520444074 28.28120976279722 22.293913988955335 47 22.027496816835722 27.627004678178512 28.056195367601827 22.28930313738394 48 22.17262543456801 28.202927164255975 27.24151251126658 22.38293488990944 49 22.421563157217047 28.285906405138988 27.48186617451393 21.810664263130032 50 21.978855205367744 28.49253923518219 27.51112319203422 22.01748236741584 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1201.0 1 628.5 2 56.0 3 183.5 4 311.0 5 282.5 6 254.0 7 169.5 8 85.0 9 139.5 10 194.0 11 310.0 12 426.0 13 824.5 14 1223.0 15 1512.5 16 1802.0 17 1724.0 18 1646.0 19 1489.0 20 1332.0 21 1300.0 22 1268.0 23 1084.5 24 901.0 25 729.0 26 557.0 27 617.0 28 677.0 29 783.5 30 890.0 31 1039.5 32 1189.0 33 1365.5 34 1542.0 35 1529.0 36 1516.0 37 1693.5 38 1871.0 39 1932.0 40 1993.0 41 2309.0 42 2625.0 43 2788.0 44 2951.0 45 3347.5 46 3744.0 47 3999.5 48 4255.0 49 4715.5 50 5176.0 51 5237.0 52 5298.0 53 5200.0 54 5102.0 55 4975.0 56 4848.0 57 4603.0 58 4358.0 59 3785.0 60 3212.0 61 2861.0 62 2510.0 63 2032.0 64 1554.0 65 1369.0 66 1184.0 67 952.5 68 721.0 69 660.5 70 600.0 71 466.5 72 333.0 73 293.5 74 254.0 75 179.0 76 104.0 77 82.0 78 60.0 79 48.5 80 37.0 81 29.5 82 22.0 83 13.5 84 5.0 85 5.5 86 6.0 87 3.0 88 0.0 89 0.5 90 1.0 91 1.0 92 1.0 93 1.5 94 2.0 95 1.5 96 1.0 97 1.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.03862716204809797 2 0.010014449419877251 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0014306356314110358 25 0.0 26 0.0 27 0.0 28 0.0028612712628220717 29 0.0 30 0.0042919068942331075 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0014306356314110358 44 0.0014306356314110358 45 0.0014306356314110358 46 0.0014306356314110358 47 0.0 48 0.0028612712628220717 49 0.0028612712628220717 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 69899.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 61.21689866807822 #Duplication Level Percentage of deduplicated Percentage of total 1 75.47090441691984 46.200947080788 2 14.81654592194438 18.140459806291936 3 4.984809534938069 9.15463740539922 4 1.9373685440523487 4.743987753758995 5 0.9675157747137182 2.9614157570208444 6 0.5118018228558074 1.8798552196741012 7 0.33419023136246784 1.4320662670424469 8 0.18695956999298902 0.915606804103063 9 0.1308716989950923 0.7210403582311622 >10 0.5912596401028277 6.462181147083649 >50 0.0373919139985978 1.5493783888181518 >100 0.023369946249123627 3.0071960972259975 >500 0.007010983874737088 2.83122791456244 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 809 1.1573842258115281 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 640 0.915606804103063 No Hit TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 530 0.7582368846478491 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 472 0.675260018026009 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 381 0.5450721755676047 No Hit GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 219 0.31330920327901685 No Hit GTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA 179 0.2560837780225754 No Hit ACGCAGAGTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAA 165 0.23605487918282095 No Hit GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 146 0.20887280218601123 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 146 0.20887280218601123 No Hit TATCAACGCAGAGTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAA 142 0.20315025966036712 No Hit GTATCAACGCAGAGTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAA 130 0.18598263208343466 No Hit ATACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA 122 0.17453754703214638 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTG 100 0.14306356314110358 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGG 99 0.14163292750969256 No Hit GGTATCAACGCAGAGTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAA 80 0.11445085051288288 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 78 0.11158957925006081 No Hit GTACATGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 73 0.10443640109300562 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 70 0.10014449419877253 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 14 0.0 0.0 0.0 0.0 0.0 15 0.0 0.0 0.0 0.0 0.0 16 0.0 0.0 0.0 0.0 0.0 17 0.0 0.0 0.0 0.0 0.0 18 0.0 0.0 0.0 0.0 0.0 19 0.0 0.0 0.0 0.0 0.0 20 0.0 0.0 0.0 0.0 0.0 21 0.0 0.0 0.0 0.0 0.0 22 0.0 0.0 0.0 0.0 0.0 23 0.0 0.0 0.0 0.0028612712628220717 0.0 24 0.0 0.0 0.0 0.008583813788466215 0.0 25 0.0 0.0 0.0 0.008583813788466215 0.0 26 0.0 0.0 0.0 0.010014449419877251 0.0 27 0.0 0.0 0.0 0.01716762757693243 0.0 28 0.0 0.0 0.0 0.025751441365398645 0.0 29 0.0 0.0 0.0 0.03862716204809797 0.0 30 0.0 0.0 0.0 0.07010114593914075 0.0 31 0.0 0.0 0.0 0.10300576546159458 0.0 32 0.0 0.0 0.0 0.14163292750969256 0.0 33 0.0 0.0 0.0 0.17310691140073534 0.0 34 0.0 0.0 0.0 0.20028898839754503 0.0 35 0.0 0.0 0.0 0.2432080573398761 0.0 36 0.0 0.0 0.0 0.2875577619136182 0.0 37 0.0 0.0 0.0 0.3447831871700597 0.0 38 0.0 0.0 0.0 0.42776005379189974 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GAGACTC 20 7.805748E-4 44.0 9 TAGGACC 30 1.2886219E-4 36.666664 4 ATACATG 35 3.1871602E-4 31.428572 1 ATCTCAT 30 0.0057085073 29.333332 18 TGTAGGA 30 0.0057085073 29.333332 2 TAGGACT 30 0.0057085073 29.333332 30 AGGATCG 40 6.965571E-4 27.5 5 ACCCCCC 55 0.004442181 20.0 43 GTATCAA 760 0.0 18.236841 1 AACGCAG 840 0.0 16.761904 6 GGTATCA 445 0.0 15.820225 1 TATCAAC 940 0.0 14.978723 2 ACATGGG 535 0.0 14.392523 3 CATGGGG 245 9.276846E-11 14.367347 4 ATCAACG 965 0.0 14.362695 3 CGCAGAG 1000 0.0 14.08 8 TACATGG 550 0.0 14.0 2 TCAACGC 995 0.0 13.929649 4 CAGAGTA 1030 0.0 13.669904 10 CAACGCA 1015 0.0 13.655173 5 >>END_MODULE