##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062249_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 18537 Sequences flagged as poor quality 0 Sequence length 25 %GC 53 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.40055025084965 32.0 32.0 32.0 32.0 32.0 2 31.152290014565462 32.0 32.0 32.0 32.0 32.0 3 31.065976155796516 32.0 32.0 32.0 32.0 32.0 4 31.15736095376814 32.0 32.0 32.0 32.0 32.0 5 31.1102120084156 32.0 32.0 32.0 32.0 32.0 6 34.72519825214436 36.0 36.0 36.0 32.0 36.0 7 34.5623347898797 36.0 36.0 36.0 32.0 36.0 8 34.4048659437881 36.0 36.0 36.0 32.0 36.0 9 34.77342612073151 36.0 36.0 36.0 32.0 36.0 10 34.367157576738414 36.0 36.0 36.0 32.0 36.0 11 34.48130765496035 36.0 36.0 36.0 32.0 36.0 12 34.48432864001726 36.0 36.0 36.0 32.0 36.0 13 34.53962345579112 36.0 36.0 36.0 32.0 36.0 14 34.49026271780763 36.0 36.0 36.0 32.0 36.0 15 34.633921346496194 36.0 36.0 36.0 32.0 36.0 16 34.63451475427523 36.0 36.0 36.0 32.0 36.0 17 34.45449641258025 36.0 36.0 36.0 32.0 36.0 18 34.60301019582457 36.0 36.0 36.0 32.0 36.0 19 34.554890219560875 36.0 36.0 36.0 32.0 36.0 20 34.404542266817714 36.0 36.0 36.0 32.0 36.0 21 34.34681987376598 36.0 36.0 36.0 32.0 36.0 22 34.51130172088256 36.0 36.0 36.0 32.0 36.0 23 34.355667044289795 36.0 36.0 36.0 32.0 36.0 24 34.326158493823165 36.0 36.0 36.0 32.0 36.0 25 34.12618007228786 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 5 1.0 6 3.0 7 1.0 8 4.0 9 4.0 10 1.0 11 0.0 12 1.0 13 0.0 14 4.0 15 6.0 16 10.0 17 7.0 18 18.0 19 24.0 20 13.0 21 26.0 22 39.0 23 53.0 24 74.0 25 96.0 26 127.0 27 191.0 28 291.0 29 368.0 30 495.0 31 688.0 32 1069.0 33 1634.0 34 4203.0 35 9086.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.61687435938933 16.156875438312564 11.026595457733182 27.19965474456492 2 17.742892593191996 19.113125101149052 35.636834439229645 27.507147866429303 3 21.098343852834873 20.13270755785726 27.884770998543452 30.884177590764416 4 15.736944324557617 14.71191195511437 33.0114372032801 36.539706517047904 5 17.047110247693055 32.99875883654417 33.37650423614484 16.57762667961794 6 35.03184713375796 33.396307891611784 16.468746626362947 15.103098348267299 7 32.27496085101787 28.98644635239484 18.494519142502295 20.244073654084993 8 28.911693221712127 32.17391304347826 17.99081825546854 20.923575479341075 9 27.978826833747434 14.329696445932807 18.61294155774009 39.07853516257967 10 18.706435402820553 24.89328362241314 29.767115145620576 26.633165829145728 11 39.259859535386276 20.232306861156133 21.210156672069154 19.297676931388438 12 24.819055849627308 22.350653559468512 26.43945122609917 26.390839364805014 13 31.246624176299015 18.86140218213244 23.571351409743976 26.320622231824565 14 24.545012691040665 18.420910514662204 24.350596748933413 32.68348004536372 15 27.2481771536592 25.617067242776127 20.399675938428302 26.735079665136375 16 28.079935187685663 24.22360248447205 22.111801242236027 25.584661085606264 17 25.557655954631382 24.283013772616798 24.542263029975693 25.617067242776127 18 25.664290343486712 23.071937783538562 23.552603154028947 27.71116871894578 19 26.44311247907554 24.531562179383336 23.311193908958366 25.714131432582754 20 26.85060201932941 24.09157172938826 23.49765131472383 25.5601749365585 21 27.334089313677843 24.28316863761542 23.267995032129164 25.11474701657757 22 27.4042874885253 22.053026621307843 23.203196716885362 27.339489173281496 23 27.35125796350286 24.068675089083253 21.725515603066622 26.85455134434726 24 26.86180266781876 22.47664308473295 23.821353350974782 26.840200896473508 25 27.18928841377821 24.009286254184214 23.048266925817945 25.75315840621963 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 3.0 1 3.0 2 3.5 3 4.0 4 4.0 5 4.0 6 6.5 7 9.0 8 9.0 9 9.0 10 18.0 11 27.0 12 27.0 13 27.0 14 31.5 15 36.0 16 36.0 17 36.0 18 77.0 19 118.0 20 118.0 21 118.0 22 167.0 23 216.0 24 216.0 25 216.0 26 282.5 27 349.0 28 349.0 29 349.0 30 492.5 31 636.0 32 636.0 33 636.0 34 716.0 35 796.0 36 796.0 37 796.0 38 906.5 39 1017.0 40 1017.0 41 1017.0 42 1300.0 43 1583.0 44 1583.0 45 1583.0 46 1862.0 47 2141.0 48 2141.0 49 2141.0 50 2308.0 51 2475.0 52 2475.0 53 2475.0 54 2403.0 55 2331.0 56 2331.0 57 2331.0 58 2429.0 59 2527.0 60 2527.0 61 2527.0 62 2108.5 63 1690.0 64 1690.0 65 1690.0 66 1427.5 67 1165.0 68 1165.0 69 1165.0 70 948.0 71 731.0 72 731.0 73 731.0 74 549.0 75 367.0 76 367.0 77 367.0 78 267.5 79 168.0 80 168.0 81 168.0 82 132.5 83 97.0 84 97.0 85 97.0 86 63.5 87 30.0 88 30.0 89 30.0 90 17.5 91 5.0 92 5.0 93 5.0 94 4.5 95 4.0 96 4.0 97 4.0 98 8.0 99 12.0 100 12.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.005394616173059287 5 0.03236769703835572 6 0.05934077790365216 7 0.09710309111506717 8 0.11868155580730431 9 0.1240761719803636 10 0.16183848519177862 11 0.14565463667260073 12 0.1240761719803636 13 0.1240761719803636 14 0.10789232346118574 15 0.11868155580730431 16 0.11868155580730431 17 0.11868155580730431 18 0.11328693963424503 19 0.09710309111506717 20 0.08631385876894859 21 0.09710309111506717 22 0.09710309111506717 23 0.08091924259588931 24 0.10789232346118574 25 0.08091924259588931 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 18537.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 63.51621082160004 #Duplication Level Percentage of deduplicated Percentage of total 1 83.83726855783931 53.25025624426822 2 7.159843723458467 9.095322867777957 3 2.5649736708000677 4.8875222527917135 4 1.690164769831833 4.294114473755192 5 1.0956344487854595 3.4795274316232403 6 0.8323424494649228 3.172034309758861 7 0.6369967725496858 2.8321734908561256 8 0.4841175471377612 2.459944974915035 9 0.32274503142517413 1.844958731186276 >10 1.3419398675046714 13.411015806225388 >50 0.033973161202649906 1.2731294168419918 >100 0.0 0.0 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source ATCCTGCACCTTGTCGTCATGAACC 71 0.38301774828720936 No Hit GCCGTACACTGTGGAGTTGGTCCGA 61 0.3290715865566165 No Hit GTGCAGGATCGTGCTGGCAAAGAGG 53 0.2859146571721422 No Hit GTTCTGATAAGAGTGTTAAAACGTT 51 0.27512542482602365 No Hit CCCTTAGGGCACAGCCACCCAGGGA 49 0.2643361924799051 No Hit CCTTTATATACTGCTGACCGGGGCG 45 0.24275772778766788 No Hit CCCTAAGGGTGGTCGTGCAGGCAAC 33 0.17802233371095647 No Hit GTCTTGAGGACCTCTGTGAACTTGC 31 0.16723310136483788 No Hit CTCTTATGTAGACCAGGCTAGCCTC 31 0.16723310136483788 No Hit CTCTTTGACGTCCCCTGGATCAGCA 30 0.16183848519177862 No Hit CGCTTAAACAGGTGAAGCATGATCA 29 0.15644386901871932 No Hit GTCTTTATTGGGTTCACACCAGGAG 29 0.15644386901871932 No Hit GCCTTAGCCTGCACAGAAGAGCAGC 28 0.15104925284566004 No Hit CTGTGGAGTTGGTCCGATAGAGCGA 28 0.15104925284566004 No Hit GTGTCTCATAGCCCTGGCTGTCCTG 27 0.14565463667260073 No Hit GTGTTTAGCTATCAAGTGGCATCCA 27 0.14565463667260073 No Hit ATATACTGCTGACCGGGGCGCTGCA 26 0.14026002049954148 No Hit CTACTGGAGGGAATGGCCGCCTCCT 25 0.13486540432648217 No Hit CTTCAGGGTTATAAATGCTGCTGTT 24 0.1294707881534229 No Hit GTACAATAAGTGATTCAGTAGAGGT 24 0.1294707881534229 No Hit CCTCACAACCAGTGAGACTCGTAGT 24 0.1294707881534229 No Hit GTGTTGGATGGGATCCCTCCACCCT 23 0.1240761719803636 No Hit TCTCTGGACGTGCCACCTCACAACC 23 0.1240761719803636 No Hit GACCAAGAGAGGCCAGGCTGCCCTG 23 0.1240761719803636 No Hit GTATCAACGCAGAGTACATGGGGTG 23 0.1240761719803636 No Hit GTACATGGGGTGTTCGTCATGTCGG 23 0.1240761719803636 No Hit GGTTTAAACCGCCACTCGTCGGCCT 22 0.11868155580730431 No Hit GGTGAAGCATGATCAGCAAGTCGCT 22 0.11868155580730431 No Hit CACCAGGAGTCCGTTGGTCTTGAGG 22 0.11868155580730431 No Hit GTTTAAGCGTGGATGCCACTTGATA 21 0.11328693963424503 No Hit GTATTTGCATTGAGAGCCCTAGGCT 21 0.11328693963424503 No Hit ACCCTGAAGTGCTCGACATCACAGA 21 0.11328693963424503 No Hit GTACATGGGGTGCGAGGCATGCTGC 21 0.11328693963424503 No Hit GGCATAGGGTCACTTGACGAAGGTT 21 0.11328693963424503 No Hit GTACATGGGGGCTTGATAACAGCAG 20 0.10789232346118574 No Hit TCTCTTGTGTGGGCAGCTTCATCCT 20 0.10789232346118574 No Hit GAGCTGGAGAGATGTTAGAAGATGG 20 0.10789232346118574 No Hit GGGCTACAGTGAGGGGAGGCAGATT 19 0.10249770728812645 No Hit GCTAAACACCGACTCACAGAGGAAT 19 0.10249770728812645 No Hit GTCAAAGAGTGAGCGCTCCGCCAAC 19 0.10249770728812645 No Hit GTACATGGGGGAGTGACATCGTCTT 19 0.10249770728812645 No Hit GTTCAGCAGTGTGGCCTCGCTGGCT 19 0.10249770728812645 No Hit GTACCAGGCAGTGACAGCCACTCTG 19 0.10249770728812645 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content pass >>END_MODULE