##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062248_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2092615 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.30432783861341 32.0 32.0 32.0 32.0 32.0 2 31.480319600117557 32.0 32.0 32.0 32.0 32.0 3 31.59648764822961 32.0 32.0 32.0 32.0 32.0 4 31.669380655304487 32.0 32.0 32.0 32.0 32.0 5 31.648162227643404 32.0 32.0 32.0 32.0 32.0 6 35.30773744812113 36.0 36.0 36.0 36.0 36.0 7 35.31064816031616 36.0 36.0 36.0 36.0 36.0 8 35.27149714591552 36.0 36.0 36.0 36.0 36.0 9 35.34783894791923 36.0 36.0 36.0 36.0 36.0 10 35.24341362362403 36.0 36.0 36.0 36.0 36.0 11 35.349424045990304 36.0 36.0 36.0 36.0 36.0 12 35.281314049646014 36.0 36.0 36.0 36.0 36.0 13 35.30872759681069 36.0 36.0 36.0 36.0 36.0 14 35.27683114189662 36.0 36.0 36.0 36.0 36.0 15 35.253921050933876 36.0 36.0 36.0 36.0 36.0 16 35.26872788353328 36.0 36.0 36.0 36.0 36.0 17 35.24748269509681 36.0 36.0 36.0 36.0 36.0 18 35.245577901333974 36.0 36.0 36.0 36.0 36.0 19 35.239045404912034 36.0 36.0 36.0 36.0 36.0 20 35.24175397767865 36.0 36.0 36.0 36.0 36.0 21 35.23603147258335 36.0 36.0 36.0 36.0 36.0 22 35.21072055777102 36.0 36.0 36.0 36.0 36.0 23 35.193027384397034 36.0 36.0 36.0 36.0 36.0 24 35.177403392406156 36.0 36.0 36.0 36.0 36.0 25 35.163324357323255 36.0 36.0 36.0 36.0 36.0 26 35.12543253297907 36.0 36.0 36.0 36.0 36.0 27 35.11182133359457 36.0 36.0 36.0 36.0 36.0 28 35.09105927272814 36.0 36.0 36.0 36.0 36.0 29 35.08003431113702 36.0 36.0 36.0 36.0 36.0 30 35.063804856602864 36.0 36.0 36.0 36.0 36.0 31 35.06111492080483 36.0 36.0 36.0 36.0 36.0 32 35.03430492469948 36.0 36.0 36.0 36.0 36.0 33 35.017843224864585 36.0 36.0 36.0 36.0 36.0 34 35.01340093614927 36.0 36.0 36.0 36.0 36.0 35 34.99848992767423 36.0 36.0 36.0 36.0 36.0 36 34.97726576556127 36.0 36.0 36.0 36.0 36.0 37 34.962845530592105 36.0 36.0 36.0 36.0 36.0 38 34.95030762944928 36.0 36.0 36.0 36.0 36.0 39 34.93705578904863 36.0 36.0 36.0 36.0 36.0 40 34.92721738112362 36.0 36.0 36.0 36.0 36.0 41 34.89795399535987 36.0 36.0 36.0 36.0 36.0 42 34.87348269987552 36.0 36.0 36.0 36.0 36.0 43 34.86045498096879 36.0 36.0 36.0 32.0 36.0 44 34.82760087259243 36.0 36.0 36.0 32.0 36.0 45 34.809825983279296 36.0 36.0 36.0 32.0 36.0 46 34.79306131323727 36.0 36.0 36.0 32.0 36.0 47 34.7646681305448 36.0 36.0 36.0 32.0 36.0 48 34.737828984309104 36.0 36.0 36.0 32.0 36.0 49 34.72619569294878 36.0 36.0 36.0 32.0 36.0 50 34.32433820841388 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 3.0 20 20.0 21 50.0 22 126.0 23 396.0 24 969.0 25 2295.0 26 4584.0 27 8664.0 28 14686.0 29 23625.0 30 35276.0 31 52213.0 32 79640.0 33 136258.0 34 320231.0 35 1413579.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.379304394132994 17.361942690459355 12.132015681415439 26.12673723399221 2 16.51039605758405 18.95266195274224 37.1052375026523 27.431704487021413 3 19.30518314697108 22.236499986380636 27.9133368918895 30.544979974758785 4 13.05147533180988 15.158218381411956 34.173765443603074 37.61654084317509 5 15.031582508766547 36.03731983060421 32.988692611250805 15.942405049378433 6 36.339321383992825 33.86303815518596 15.688813788700436 14.108826672120776 7 31.662728213264263 29.671774311089234 19.172088511264615 19.493408964381885 8 28.736867507878898 33.19205873990199 18.1253121094898 19.945761642729313 9 26.90480570960258 14.753741132506457 18.177400047309227 40.16405311058174 10 16.644740331824377 26.810117303103826 30.480313368979356 26.064828996092444 11 37.50646917851588 21.34176616338887 21.18703153709593 19.964733120999323 12 24.84064197188685 23.296210721991383 27.982357003079876 23.880790303041888 13 29.68964668608416 19.347514951388572 24.805996325172096 26.156842037355176 14 23.66689524828982 18.94825373993783 24.694747958893537 32.69010305287882 15 25.384459157561235 26.835848925865484 21.816005333040238 25.96368658353304 16 26.021982223071777 25.95015769855682 22.96932046258243 25.058539615788973 17 24.42938619860796 26.036131825491072 24.56672632089515 24.967755655005817 18 25.069757284313916 25.199117084716573 25.397003650459975 24.334121980509536 19 25.779132807515953 24.879970754295464 25.102132977160156 24.238763461028427 20 26.046946158147005 24.338792225976174 24.882180626108067 24.732080989768757 21 26.356114239838668 24.122306300967928 24.76556843948839 24.75601101970501 22 26.135863500930657 23.953235544999917 25.02830190933354 24.882599044735894 23 25.02873199322379 24.098269390212725 25.370218602083995 25.50278001447949 24 24.946131323446696 24.608654637867254 25.172931712820816 25.27228232586523 25 25.24349974433841 24.27255914862301 25.17932151714844 25.304619589890137 26 24.919992067303674 24.879802925062304 25.35007801281178 24.850126994822244 27 25.220610090958356 24.608645870268937 24.969487806113523 25.20125623265918 28 25.16787856544827 24.360599144407104 25.28591444835667 25.185607841787956 29 24.967576251958086 24.752532970913723 25.269879317710682 25.01001145941751 30 25.134330754718064 24.715807542401876 25.1353820804398 25.014479622440263 31 25.267788235237898 24.524790870708994 24.886206426917646 25.321214467135462 32 25.31296055234742 24.636719175607713 24.691531475736358 25.358788796308506 33 24.99304696049431 24.514744744601238 25.01999894868131 25.47220934622314 34 25.480801625156086 24.503691342679605 25.065194048166894 24.95031298399741 35 25.5260553482911 24.4397049989893 25.278373394284536 24.75586625843507 36 24.998172138225534 24.742701574923935 25.03506388436636 25.224062402484172 37 25.68661914619903 24.370869915109253 24.98824413210155 24.954266806590166 38 25.0876176877341 24.45233569114992 25.086088499838 25.37395812127798 39 25.60698500475725 24.4751856186356 24.747335487912867 25.17049388869429 40 25.542958834143803 24.61813201516959 24.91317055081506 24.925738599871547 41 24.86941994259734 24.961220231808873 25.18534483170584 24.984014993887946 42 25.66729892382472 24.613871521331152 24.87021523983478 24.848614315009346 43 25.306355740639674 24.304492898931517 24.9952927165661 25.393858643862703 44 25.0535118031817 24.755212472563105 24.86536626254642 25.325909461708772 45 25.161333177862183 24.751405452832028 24.970801370949705 25.116459998356085 46 25.194988901128045 24.624920252992155 24.87122202283811 25.308868823041685 47 25.162920035496665 24.72016748614517 25.080725282675882 25.03618719568229 48 25.503196621110796 25.089103005846535 24.46072251570115 24.946977857341523 49 25.215898626210436 24.842188868706014 24.533137589705873 25.40877491537768 50 25.182442858624288 25.12156087266729 24.71521901505945 24.980777253648974 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 40.0 1 66.0 2 92.0 3 228.5 4 365.0 5 399.0 6 433.0 7 325.0 8 217.0 9 318.5 10 420.0 11 730.5 12 1041.0 13 1961.5 14 2882.0 15 3732.5 16 4583.0 17 4307.5 18 4032.0 19 3783.5 20 3535.0 21 4100.0 22 4665.0 23 5538.5 24 6412.0 25 8387.0 26 10362.0 27 12843.5 28 15325.0 29 18305.5 30 21286.0 31 24751.5 32 28217.0 33 32739.5 34 37262.0 35 43415.5 36 49569.0 37 57135.0 38 64701.0 39 73699.5 40 82698.0 41 91040.5 42 99383.0 43 106283.0 44 113183.0 45 123592.5 46 134002.0 47 143462.0 48 152922.0 49 159847.0 50 166772.0 51 168166.5 52 169561.0 53 169761.0 54 169961.0 55 167906.5 56 165852.0 57 158531.5 58 151211.0 59 139848.5 60 128486.0 61 112645.0 62 96804.0 63 84061.5 64 71319.0 65 59945.0 66 48571.0 67 40502.0 68 32433.0 69 27372.0 70 22311.0 71 17176.5 72 12042.0 73 10124.0 74 8206.0 75 6250.5 76 4295.0 77 3647.0 78 2999.0 79 2470.0 80 1941.0 81 1467.0 82 993.0 83 814.5 84 636.0 85 495.5 86 355.0 87 238.0 88 121.0 89 84.0 90 47.0 91 33.0 92 19.0 93 17.0 94 15.0 95 14.5 96 14.0 97 15.5 98 17.0 99 12.0 100 7.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.03402441442883665 2 0.0043486260014383915 3 2.867225935014324E-4 4 4.77870989169054E-5 5 4.77870989169054E-5 6 1.433612967507162E-4 7 0.0 8 0.0 9 0.0 10 9.55741978338108E-5 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 7.168064837535811E-4 17 0.0 18 9.55741978338108E-5 19 0.0 20 2.3893549458452702E-4 21 0.0 22 0.0 23 0.0 24 0.0012424645718395405 25 2.3893549458452702E-4 26 4.7787098916905404E-4 27 4.3008389025214863E-4 28 0.0014814000664240675 29 6.212322859197703E-4 30 9.079548794212026E-4 31 4.7787098916905404E-4 32 9.079548794212026E-4 33 2.3893549458452702E-4 34 7.645935826704864E-4 35 5.734451870028648E-4 36 2.867225935014324E-4 37 0.0020548452534269327 38 4.77870989169054E-5 39 8.601677805042973E-4 40 3.345096924183378E-4 41 0.0013858258685902566 42 0.005352155078693405 43 0.005399942177610311 44 0.004109690506853865 45 0.0024371420447621755 46 0.0028672259350143244 47 0.0011468903740057296 48 0.004444200199272203 49 0.003918542111186243 50 0.002007058154510027 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 2092615.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 52.43625677140881 #Duplication Level Percentage of deduplicated Percentage of total 1 72.95083841867589 38.25268895011243 2 14.933696458670884 15.661342841062895 3 5.12299683739751 8.058923328146731 4 2.231789144898523 4.681066746461673 5 1.2189756327473629 3.1959259638415625 6 0.7293109537410658 2.2945401861940544 7 0.5293154427898844 1.9428724329841625 8 0.3604343900683311 1.5119864181495304 9 0.2807460989846296 1.324914708053645 >10 1.5073219354503655 13.983134479836382 >50 0.08751095416784456 3.106113159516299 >100 0.0431129129911774 4.244849516639803 >500 0.0028482651606482104 1.0285560014356516 >1k 0.0011025542557347866 0.7130852675651803 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.911483956676216E-4 2 0.0 0.0 0.0 0.0 1.911483956676216E-4 3 0.0 0.0 0.0 0.0 1.911483956676216E-4 4 0.0 0.0 0.0 0.0 1.911483956676216E-4 5 0.0 0.0 0.0 0.0 1.911483956676216E-4 6 0.0 0.0 0.0 0.0 2.867225935014324E-4 7 0.0 0.0 0.0 0.0 2.867225935014324E-4 8 0.0 0.0 0.0 0.0 2.867225935014324E-4 9 0.0 0.0 0.0 0.0 2.867225935014324E-4 10 0.0 0.0 0.0 0.0 3.822967913352432E-4 11 0.0 0.0 0.0 0.0 4.3008389025214863E-4 12 0.0 0.0 0.0 0.0 0.0010035290772550136 13 0.0 0.0 0.0 0.0 0.001051316176171919 14 0.0 0.0 0.0 0.0 0.001051316176171919 15 0.0 0.0 0.0 1.911483956676216E-4 0.001194677472922635 16 0.0 0.0 0.0 2.867225935014324E-4 0.0013858258685902566 17 0.0 0.0 0.0 2.867225935014324E-4 0.0014336129675071622 18 0.0 0.0 0.0 3.822967913352432E-4 0.0014814000664240675 19 0.0 0.0 0.0 3.822967913352432E-4 0.0014814000664240675 20 0.0 0.0 0.0 3.822967913352432E-4 0.0017681226599254999 21 0.0 0.0 0.0 6.690193848366756E-4 0.002007058154510027 22 0.0 0.0 0.0 9.557419783381081E-4 0.0020548452534269322 23 0.0 0.0 0.0 0.001290251670756446 0.002102632352343838 24 0.0 0.0 0.0 0.0018636968577593108 0.002102632352343838 25 0.0 0.0 0.0 0.002150419451260743 0.002150419451260743 26 0.0 0.0 0.0 0.0027716517371805132 0.00238935494584527 27 0.0 0.0 0.0 0.003249522726349567 0.002484929143679081 28 0.0 0.0 0.0 0.0038229679133524323 0.002484929143679081 29 0.0 0.0 0.0 0.005830026067862459 0.002580503341512892 30 0.0 0.0 0.0 0.00874503910179369 0.002580503341512892 31 0.0 0.0 0.0 0.014575065169656148 0.0026282904404297974 32 0.0 0.0 0.0 0.020309517039684796 0.0026282904404297974 33 0.0 0.0 0.0 0.026665201195633214 0.0026282904404297974 34 0.0 0.0 0.0 0.033833266033169024 0.002723864638263608 35 0.0 0.0 0.0 0.04052345988153578 0.002723864638263608 36 0.0 0.0 0.0 0.05141891843459021 0.0027716517371805132 37 0.0 0.0 0.0 0.0681444030555071 0.0027716517371805132 38 0.0 0.0 0.0 0.08897957818327785 0.0028672259350143244 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 1075 0.0 28.86387 1 GTATCAA 2870 0.0 28.370287 1 TACCGTA 155 1.8189894E-12 21.289143 7 TCAACGC 4115 0.0 19.673273 4 CGCAATA 280 0.0 19.643177 36 TATCAAC 4210 0.0 19.439747 2 CAACGCA 4195 0.0 19.298096 5 ACCGTAT 160 5.2750693E-11 19.248934 8 ATCAACG 4270 0.0 19.010656 3 ATACGAA 290 0.0 18.966732 40 ATACGCG 70 8.1225345E-4 18.85835 39 AACGCAG 4355 0.0 18.589096 6 CGACGCT 60 0.007411127 18.334509 41 TTTTACG 85 1.4312871E-4 18.117943 24 TACGAAT 305 0.0 18.033943 41 CGAATGC 295 0.0 17.900734 43 CTAGCGG 300 0.0 17.600288 29 CCGTATG 185 4.2382453E-10 16.647728 9 ACGCGTA 80 0.0019881527 16.501059 41 GCGCAAT 320 0.0 16.500269 35 >>END_MODULE