##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062247_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 62379 Sequences flagged as poor quality 0 Sequence length 50 %GC 52 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 28.96067586848138 32.0 32.0 32.0 21.0 32.0 2 28.602782987864504 32.0 32.0 32.0 14.0 32.0 3 30.341877875567096 32.0 32.0 32.0 21.0 32.0 4 30.944580708251173 32.0 32.0 32.0 32.0 32.0 5 30.638965036310296 32.0 32.0 32.0 32.0 32.0 6 34.19971464755767 36.0 36.0 36.0 32.0 36.0 7 34.20086888215585 36.0 36.0 36.0 32.0 36.0 8 34.049888584299204 36.0 36.0 36.0 32.0 36.0 9 34.417512303820196 36.0 36.0 36.0 32.0 36.0 10 33.94336234950865 36.0 36.0 36.0 32.0 36.0 11 34.58928485548021 36.0 36.0 36.0 32.0 36.0 12 34.2363135029417 36.0 36.0 36.0 32.0 36.0 13 34.45117747960051 36.0 36.0 36.0 32.0 36.0 14 34.30603247887911 36.0 36.0 36.0 32.0 36.0 15 34.17752769361484 36.0 36.0 36.0 32.0 36.0 16 34.25303387357925 36.0 36.0 36.0 32.0 36.0 17 34.201045223552796 36.0 36.0 36.0 32.0 36.0 18 34.2212282979849 36.0 36.0 36.0 32.0 36.0 19 34.209541672678306 36.0 36.0 36.0 32.0 36.0 20 34.2547972875487 36.0 36.0 36.0 32.0 36.0 21 34.25058112505811 36.0 36.0 36.0 32.0 36.0 22 34.24306256913384 36.0 36.0 36.0 32.0 36.0 23 34.12898571634685 36.0 36.0 36.0 32.0 36.0 24 34.114349380400455 36.0 36.0 36.0 32.0 36.0 25 34.09969701341798 36.0 36.0 36.0 32.0 36.0 26 33.979448211737925 36.0 36.0 36.0 32.0 36.0 27 33.92814889626317 36.0 36.0 36.0 32.0 36.0 28 33.922265506019656 36.0 36.0 36.0 32.0 36.0 29 33.87494188749419 36.0 36.0 36.0 32.0 36.0 30 33.86170025168727 36.0 36.0 36.0 32.0 36.0 31 33.823418137514224 36.0 36.0 36.0 32.0 36.0 32 33.769505763157476 36.0 36.0 36.0 32.0 36.0 33 33.69270106927011 36.0 36.0 36.0 32.0 36.0 34 33.717388864842334 36.0 36.0 36.0 32.0 36.0 35 33.71647509578544 36.0 36.0 36.0 32.0 36.0 36 33.6411131951458 36.0 36.0 36.0 27.0 36.0 37 33.63938184324853 36.0 36.0 36.0 27.0 36.0 38 33.56958271213068 36.0 36.0 36.0 27.0 36.0 39 33.56291380111897 36.0 36.0 36.0 27.0 36.0 40 33.532054056653685 36.0 36.0 36.0 27.0 36.0 41 33.492345180269 36.0 36.0 36.0 21.0 36.0 42 33.454848586864166 36.0 36.0 36.0 21.0 36.0 43 33.451209541672675 36.0 36.0 36.0 21.0 36.0 44 33.34853075554273 36.0 36.0 36.0 21.0 36.0 45 33.33165007454432 36.0 36.0 36.0 21.0 36.0 46 33.31489764183459 36.0 36.0 36.0 21.0 36.0 47 33.29067474630885 36.0 36.0 36.0 21.0 36.0 48 33.28568909408615 36.0 36.0 36.0 21.0 36.0 49 33.19282130204075 36.0 36.0 36.0 21.0 36.0 50 32.52674778370926 36.0 32.0 36.0 14.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 20 1.0 21 0.0 22 10.0 23 33.0 24 51.0 25 151.0 26 272.0 27 583.0 28 1058.0 29 1772.0 30 2849.0 31 4750.0 32 7674.0 33 12016.0 34 17847.0 35 13312.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.33651857433743 18.362700614067435 13.985666415481553 26.315114396113575 2 18.81081774315074 20.83553760079514 34.417031372737625 25.9366132833165 3 22.675900543452123 21.920838743808012 27.820260023405314 27.583000689334554 4 17.510700716587312 16.830984786546754 33.41509161737123 32.2432228794947 5 22.02023116754036 30.965549303451485 29.432982253643054 17.58123727536511 6 36.00250084162939 33.96014684429055 14.80786803251094 15.229484281569118 7 30.81646066785296 29.415348113948603 18.488593917824907 21.279597300373524 8 28.985716346847497 31.33105692620914 17.523525545456003 22.15970118148736 9 26.5073181679732 13.685695506500586 17.40970518924638 42.39728113627984 10 17.632536590839866 25.35148046618253 29.03541255871367 27.980570384263935 11 37.71461549559948 20.2231520223152 20.30010099552734 21.762131486557976 12 24.607640391798522 22.656663300149088 26.539380240144922 26.19631606790747 13 29.89146988569871 17.93231696564549 23.405312685358854 28.770900463296943 14 23.895862389586238 17.866589717693454 23.358822680709853 34.87872521201045 15 25.832411548758394 25.282547011013325 20.87401208740121 28.011029352827073 16 26.60991679892272 24.56595969797528 22.505971560941983 26.31815194216002 17 25.056509402202664 25.05009698776832 23.612113050866476 26.28128055916254 18 25.765081197197777 24.24854518347521 23.998461020535757 25.987912598791258 19 26.319755045768606 24.279004152038347 23.987239295275653 25.414001506917394 20 26.563426794273713 23.37325061318713 23.697077542121548 26.366245050417607 21 27.220699273794065 23.33958543740682 23.39409096009875 26.045624328700363 22 26.587473348402508 23.67142788438417 23.546385802914443 26.194712964298883 23 25.56789945334167 23.507911316308373 23.867006524631687 27.05718270571827 24 25.40680058354842 23.848533914744216 24.353527742597432 26.391137759109927 25 25.94623190496802 23.358822680709853 24.47297968867728 26.221965725644846 26 26.002340531268537 23.55921063178313 23.915099632889273 26.52334920405906 27 25.951041215793776 23.822119623591274 23.988842398884238 26.23799676173071 28 25.755462575546257 23.684252713252857 24.15075586335145 26.409528847849433 29 25.89813879671043 23.786851344202375 24.020904471055964 26.29410538803123 30 25.71419410689666 23.756773221328032 24.55352848760781 25.975504184167498 31 26.226775036470606 23.39890027092451 24.309463120601485 26.0648615720034 32 26.24761538338223 23.60730374004072 23.50951441991696 26.635566456660094 33 25.45247599352346 23.91670273649786 24.442520720114143 26.18830054986454 34 26.061655364786223 23.573638564260406 24.21007069686914 26.15463537408423 35 26.403116433415093 23.89906859680341 23.697077542121548 26.00073742765995 36 25.381939434745664 23.935939979800892 23.820516519982686 26.86160406547075 37 26.130588819955435 24.04495102518476 23.706696163773064 26.117763991086747 38 26.229981243687778 23.487070969396754 24.064188268487793 26.218759518427674 39 26.114557783869575 23.855784799371584 23.60249442921496 26.427162987543884 40 26.409528847849433 24.028919989098895 23.799676173071067 25.761874989980605 41 26.18349123903878 23.80127927667965 24.105868962311032 25.909360521970537 42 26.503783506476854 23.608439143260227 23.781582659997436 26.10619469026549 43 26.09413575298984 23.57401648016929 24.072589695084805 26.25925807175607 44 25.59917918463536 24.342305657534027 23.733106754092052 26.32540840373856 45 26.234790554513538 24.205261386043382 23.519133041568477 26.040815017874607 46 25.4476666826977 24.381602782987866 24.19724586800045 25.973484666313983 47 25.761874989980605 24.07380689013931 24.335112778338864 25.829205341541222 48 26.46606175254096 24.404437461925678 23.277437558113437 25.852063227419926 49 26.04966574218061 24.223672186863748 23.6401237635667 26.086538307388942 50 26.363038843200435 24.056172750444862 23.92952756536655 25.651260840988154 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 5.0 1 3.5 2 2.0 3 3.5 4 5.0 5 3.5 6 2.0 7 2.0 8 2.0 9 5.0 10 8.0 11 10.5 12 13.0 13 15.0 14 17.0 15 17.5 16 18.0 17 23.0 18 28.0 19 46.5 20 65.0 21 80.0 22 95.0 23 111.0 24 127.0 25 177.5 26 228.0 27 290.0 28 352.0 29 417.5 30 483.0 31 596.5 32 710.0 33 855.0 34 1000.0 35 1185.5 36 1371.0 37 1573.0 38 1775.0 39 2000.5 40 2226.0 41 2426.5 42 2627.0 43 2888.0 44 3149.0 45 3430.0 46 3711.0 47 3961.0 48 4211.0 49 4313.5 50 4416.0 51 4502.5 52 4589.0 53 4620.0 54 4651.0 55 4737.5 56 4824.0 57 4785.5 58 4747.0 59 4354.0 60 3961.0 61 3679.5 62 3398.0 63 2979.5 64 2561.0 65 2270.5 66 1980.0 67 1776.5 68 1573.0 69 1418.5 70 1264.0 71 1004.0 72 744.0 73 643.0 74 542.0 75 421.5 76 301.0 77 268.0 78 235.0 79 196.5 80 158.0 81 123.5 82 89.0 83 72.5 84 56.0 85 39.0 86 22.0 87 16.0 88 10.0 89 7.0 90 4.0 91 5.5 92 7.0 93 4.0 94 1.0 95 2.5 96 4.0 97 4.0 98 4.0 99 6.0 100 8.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.012824828868689785 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0032062072171724462 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0016031036085862231 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.004809310825758669 43 0.0016031036085862231 44 0.0032062072171724462 45 0.0 46 0.0 47 0.0 48 0.0016031036085862231 49 0.0032062072171724462 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 62379.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 87.09341284727232 #Duplication Level Percentage of deduplicated Percentage of total 1 93.01097040200264 81.00642844547043 2 4.820718598144603 8.397056701774636 3 1.0362980415255485 2.7076419949021306 4 0.3718156383448682 1.2953077157376682 5 0.20063319098807247 0.8736914666794915 6 0.14173170372551908 0.740633867166835 7 0.09203357384773965 0.561086263005178 8 0.05890148726255338 0.4103945237980731 9 0.042335443969960244 0.33184244697734816 >10 0.21719923428066557 3.312012055339136 >50 0.007362685907819172 0.3639045191490726 >100 0.0 0.0 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 64 0.10259863094951828 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.001603103608586223 6 0.0 0.0 0.0 0.0 0.001603103608586223 7 0.0 0.0 0.0 0.0 0.001603103608586223 8 0.0 0.0 0.0 0.0 0.001603103608586223 9 0.0 0.0 0.0 0.0 0.001603103608586223 10 0.0 0.0 0.0 0.0 0.001603103608586223 11 0.0 0.0 0.0 0.0 0.001603103608586223 12 0.0 0.0 0.0 0.0 0.003206207217172446 13 0.0 0.0 0.0 0.0 0.003206207217172446 14 0.0 0.0 0.0 0.0 0.003206207217172446 15 0.0 0.0 0.0 0.0 0.003206207217172446 16 0.0 0.0 0.0 0.0 0.003206207217172446 17 0.0 0.0 0.0 0.0 0.003206207217172446 18 0.0 0.0 0.0 0.0 0.003206207217172446 19 0.0 0.0 0.0 0.0 0.003206207217172446 20 0.0 0.0 0.0 0.0 0.003206207217172446 21 0.0 0.0 0.0 0.0 0.003206207217172446 22 0.0 0.0 0.0 0.0 0.003206207217172446 23 0.0 0.0 0.0 0.0 0.003206207217172446 24 0.0 0.0 0.0 0.0 0.003206207217172446 25 0.0 0.0 0.0 0.0 0.003206207217172446 26 0.0 0.0 0.0 0.0 0.003206207217172446 27 0.0 0.0 0.0 0.0 0.003206207217172446 28 0.0 0.0 0.0 0.0 0.003206207217172446 29 0.0 0.0 0.0 0.0 0.003206207217172446 30 0.0 0.0 0.0 0.0 0.003206207217172446 31 0.0 0.0 0.0 0.001603103608586223 0.003206207217172446 32 0.0 0.0 0.0 0.001603103608586223 0.003206207217172446 33 0.0 0.0 0.0 0.001603103608586223 0.003206207217172446 34 0.0 0.0 0.0 0.001603103608586223 0.003206207217172446 35 0.0 0.0 0.0 0.001603103608586223 0.003206207217172446 36 0.0 0.0 0.0 0.003206207217172446 0.003206207217172446 37 0.0 0.0 0.0 0.003206207217172446 0.003206207217172446 38 0.0 0.0 0.0 0.003206207217172446 0.003206207217172446 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 25 0.0023357742 35.2 1 GCATGGC 30 0.0057038576 29.333332 8 GATTAAG 45 0.0013834143 24.444445 1 TATCAAC 80 8.815678E-5 19.250002 1 ATCAACG 80 8.815678E-5 19.250002 2 TCAACGC 85 1.4034755E-4 18.117645 3 CAACGCA 95 3.283096E-4 16.210526 4 AACGCAG 100 4.8508577E-4 15.400001 5 ACGCAGA 115 0.0013976111 13.391303 6 CGCAGAG 115 0.0013976111 13.391303 7 AGAGTAC 125 0.0026166837 12.32 10 GCAGAGT 135 0.0046539116 11.407407 8 AGTACAT 135 0.0046539116 11.407407 12 GAGTACA 140 0.0061025824 11.0 11 CAGAGTA 140 0.0061025824 11.0 9 GTACATG 190 0.0054349257 9.263158 13 >>END_MODULE