##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062246_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1719399 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.283122183972424 32.0 32.0 32.0 32.0 32.0 2 31.4577646026315 32.0 32.0 32.0 32.0 32.0 3 31.583036863462176 32.0 32.0 32.0 32.0 32.0 4 31.659712492562807 32.0 32.0 32.0 32.0 32.0 5 31.637405861001433 32.0 32.0 32.0 32.0 32.0 6 35.28677462299326 36.0 36.0 36.0 36.0 36.0 7 35.28710846057256 36.0 36.0 36.0 36.0 36.0 8 35.23871538834209 36.0 36.0 36.0 36.0 36.0 9 35.32366309390665 36.0 36.0 36.0 36.0 36.0 10 35.20991869833587 36.0 36.0 36.0 36.0 36.0 11 35.32148558885983 36.0 36.0 36.0 36.0 36.0 12 35.24769527026595 36.0 36.0 36.0 36.0 36.0 13 35.28279299918169 36.0 36.0 36.0 36.0 36.0 14 35.24711599809003 36.0 36.0 36.0 36.0 36.0 15 35.2250757386738 36.0 36.0 36.0 36.0 36.0 16 35.2314320294475 36.0 36.0 36.0 36.0 36.0 17 35.218047701551534 36.0 36.0 36.0 36.0 36.0 18 35.215763763966365 36.0 36.0 36.0 36.0 36.0 19 35.20194265554417 36.0 36.0 36.0 36.0 36.0 20 35.20589345463153 36.0 36.0 36.0 36.0 36.0 21 35.193453642813566 36.0 36.0 36.0 36.0 36.0 22 35.1725655301649 36.0 36.0 36.0 36.0 36.0 23 35.14510768006728 36.0 36.0 36.0 36.0 36.0 24 35.12911953537253 36.0 36.0 36.0 36.0 36.0 25 35.11377929148499 36.0 36.0 36.0 36.0 36.0 26 35.07254976884365 36.0 36.0 36.0 36.0 36.0 27 35.0599651389817 36.0 36.0 36.0 36.0 36.0 28 35.038601860301185 36.0 36.0 36.0 36.0 36.0 29 35.01286496037278 36.0 36.0 36.0 36.0 36.0 30 34.991663947693354 36.0 36.0 36.0 36.0 36.0 31 34.99247527769878 36.0 36.0 36.0 36.0 36.0 32 34.96991274276651 36.0 36.0 36.0 36.0 36.0 33 34.950330900506515 36.0 36.0 36.0 36.0 36.0 34 34.94811733634834 36.0 36.0 36.0 36.0 36.0 35 34.92585723267258 36.0 36.0 36.0 36.0 36.0 36 34.90211696063567 36.0 36.0 36.0 36.0 36.0 37 34.88127479427405 36.0 36.0 36.0 32.0 36.0 38 34.86832608370715 36.0 36.0 36.0 32.0 36.0 39 34.82763570294039 36.0 36.0 36.0 32.0 36.0 40 34.830539043002815 36.0 36.0 36.0 32.0 36.0 41 34.803752357655206 36.0 36.0 36.0 32.0 36.0 42 34.77560298685762 36.0 36.0 36.0 32.0 36.0 43 34.77230474136602 36.0 36.0 36.0 32.0 36.0 44 34.728941915169194 36.0 36.0 36.0 32.0 36.0 45 34.71182663244541 36.0 36.0 36.0 32.0 36.0 46 34.67798631963843 36.0 36.0 36.0 32.0 36.0 47 34.65945717079049 36.0 36.0 36.0 32.0 36.0 48 34.635519155239706 36.0 36.0 36.0 32.0 36.0 49 34.61224939644608 36.0 36.0 36.0 32.0 36.0 50 34.21623369561108 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 1.0 18 0.0 19 3.0 20 17.0 21 49.0 22 118.0 23 323.0 24 822.0 25 1895.0 26 4133.0 27 7693.0 28 13359.0 29 21154.0 30 31788.0 31 46806.0 32 70219.0 33 119062.0 34 272029.0 35 1129928.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.201388404056765 17.65840047288586 11.71375744120344 26.426453681853936 2 16.140353326144435 19.797791915166364 37.48887640331806 26.57297835537114 3 18.9965045742967 23.098308120903344 28.384194394523636 29.520992910276316 4 12.566891105554905 15.754923668095655 35.47117335766742 36.207011868682024 5 14.554795018491925 36.72265716101963 33.28581673014815 15.436731090340288 6 35.02334540734072 35.05166930712878 16.385928547001388 13.539056738529112 7 30.79360869699238 30.048580928568647 20.01961150378708 19.138198870651895 8 27.971634274534303 33.682176155738134 18.966394653015385 19.379794916712175 9 27.021476690401702 14.271149395806326 18.56642931629017 40.14094459750181 10 16.23721353312442 26.73938987877138 31.30413238137113 25.71926420673306 11 37.470825561722435 21.084053206963596 22.17705139993684 19.268069831377126 12 24.536887598515527 23.492278406582763 28.869564307063104 23.1012696878386 13 29.547650080057043 19.431440869745767 25.18065905586778 25.84024999432941 14 23.32832576964393 19.61778505163723 25.068410531819545 31.985478646899296 15 25.029617907187333 27.670075415886597 21.872177429439006 25.428129247487057 16 25.686481720477637 25.93372157337836 23.86425828334932 24.515538422794688 17 23.988614626389804 26.235213583350927 25.20688915138371 24.56928263887556 18 24.585406253598652 25.324213065766195 26.261927167362455 23.8284535132727 19 25.597199951843642 24.899514307034025 25.239749470599904 24.263536270522433 20 25.770940226614726 24.55679152073347 25.113266650924686 24.55900160172712 21 26.1231547320632 24.425002239155795 24.679626241277468 24.772216787503535 22 25.723116042291522 24.67449382022439 25.122789998133065 24.479600139351017 23 24.373254111761273 24.635729851802697 25.61479402371878 25.376222012717246 24 24.666711644067462 24.90057474138964 25.69469728076716 24.73801633377574 25 24.79776340193684 24.48649148509623 25.672546828917348 25.043198284049584 26 24.338774817027495 25.472145838276965 25.89590225336516 24.293177091330385 27 24.858772505814567 25.050119548281398 25.331207772063213 24.759900173840823 28 24.52735485056701 24.86823631501379 25.633692884470204 24.970715949948993 29 24.414342054832204 24.96093093426684 25.569692990134296 25.055034020766655 30 24.45199500050309 25.046397727543702 25.849597498623044 24.65200977333016 31 25.105139093015016 24.717326910896837 25.047793140470247 25.1297408556179 32 24.885365655061708 25.026230385371473 25.056008561225557 25.03239539834126 33 24.41554785772612 24.86122969335601 25.601260448485156 25.121962000432713 34 25.01975997231568 24.957586578922115 25.725361102952508 24.297292345809694 35 25.41971182870244 24.762270893116995 25.668345940488337 24.149671337692233 36 24.29130677789946 25.39954414251043 25.416643160363776 24.89250591922633 37 25.28982915303526 25.02903671392221 25.175834242093785 24.505299890948745 38 24.685602352915176 24.972272288165804 25.40719169895993 24.934933659959093 39 25.33666087777846 24.758489367716148 24.957455742922182 24.947394011583203 40 25.614212424472065 24.819398893914553 25.329170633658194 24.237218047955185 41 24.564884990051606 25.11985473774451 25.881411421489116 24.433848850714767 42 25.49279857710609 25.4875057653842 25.20937141753712 23.810324239972594 43 24.88732522978441 24.66764650628239 25.6079551964749 24.83707306745829 44 24.46884555007471 25.335699383652035 25.232751766540396 24.962703299732862 45 24.625357833723204 25.422682906685807 25.257506511090668 24.694452748500325 46 24.656762217613277 25.04818647847283 25.196148338744255 25.09890296516964 47 24.970658130286044 25.0120682615771 25.501836120568623 24.515437487568235 48 25.335159626133436 25.455322712917237 24.574921626447512 24.63459603450181 49 24.788216798530126 25.455860978323518 24.82456818910168 24.931354034044677 50 24.930526879031273 25.740067582893733 24.68718193291729 24.642223605157703 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 119.0 1 89.5 2 60.0 3 150.5 4 241.0 5 246.5 6 252.0 7 223.0 8 194.0 9 282.5 10 371.0 11 572.0 12 773.0 13 1444.5 14 2116.0 15 2680.5 16 3245.0 17 3254.0 18 3263.0 19 3208.0 20 3153.0 21 3877.0 22 4601.0 23 5509.0 24 6417.0 25 8376.0 26 10335.0 27 13582.5 28 16830.0 29 20089.0 30 23348.0 31 26720.0 32 30092.0 33 35139.0 34 40186.0 35 46725.5 36 53265.0 37 60591.0 38 67917.0 39 73073.5 40 78230.0 41 83340.0 42 88450.0 43 91621.5 44 94793.0 45 101989.5 46 109186.0 47 115903.5 48 122621.0 49 126935.0 50 131249.0 51 129216.0 52 127183.0 53 125277.0 54 123371.0 55 124187.0 56 125003.0 57 120326.5 58 115650.0 59 106313.0 60 96976.0 61 85155.5 62 73335.0 63 63248.5 64 53162.0 65 44351.5 66 35541.0 67 30732.0 68 25923.0 69 23360.5 70 20798.0 71 16267.0 72 11736.0 73 10061.0 74 8386.0 75 6073.5 76 3761.0 77 3289.5 78 2818.0 79 2387.0 80 1956.0 81 1528.0 82 1100.0 83 906.0 84 712.0 85 568.5 86 425.0 87 285.5 88 146.0 89 98.5 90 51.0 91 34.0 92 17.0 93 19.0 94 21.0 95 14.5 96 8.0 97 9.5 98 11.0 99 6.5 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.034372475498706236 2 0.004710948418604408 3 5.234387131782675E-4 4 0.0 5 0.0 6 1.744795710594225E-4 7 0.0 8 0.0 9 0.0 10 1.744795710594225E-4 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 9.3055771231692E-4 17 0.0 18 2.9079928509903754E-4 19 0.0 20 2.9079928509903754E-4 21 5.81598570198075E-5 22 0.0 23 1.16319714039615E-4 24 9.887175693367276E-4 25 1.16319714039615E-4 26 8.723978552971126E-4 27 5.815985701980751E-4 28 0.0019192752816536477 29 4.6527885615846E-4 30 0.001512156282514995 31 5.815985701980751E-4 32 0.0011050372833763425 33 6.397584272178825E-4 34 8.142379982773051E-4 35 2.9079928509903754E-4 36 1.16319714039615E-4 37 0.00139583656847538 38 0.0 39 7.560781412574975E-4 40 1.16319714039615E-4 41 0.001512156282514995 42 0.005001747703703445 43 0.004071189991386525 44 0.004536468847544985 45 0.0014539964254951874 46 0.0021519147097328775 47 7.560781412574975E-4 48 0.004013030134366718 49 0.004071189991386525 50 0.0016866358535744174 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1719399.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 54.662681213422715 #Duplication Level Percentage of deduplicated Percentage of total 1 76.75111430501278 41.954216940298814 2 13.927101158967254 15.22585381759434 3 4.157843838504217 6.818366768380496 4 1.6781423692476773 3.669270454436948 5 0.8852040136889844 2.419381240456161 6 0.5124977860932073 1.6808701862278737 7 0.35065404133893824 1.3417383054536112 8 0.25798453253592335 1.1281701008004048 9 0.19511744303307635 0.9599078328925698 >10 1.1250729017508245 11.265500515976743 >50 0.08946295249442929 3.357593283562441 >100 0.0623107075498859 6.802473078577602 >500 0.0056739905498405345 2.0792124936986203 >1k 0.0018199592329677186 1.2974449816434594 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 1957 0.11381884018776328 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.3263942807923E-4 2 0.0 0.0 0.0 0.0 2.3263942807923E-4 3 0.0 5.81598570198075E-5 0.0 0.0 2.3263942807923E-4 4 0.0 5.81598570198075E-5 0.0 0.0 2.3263942807923E-4 5 0.0 5.81598570198075E-5 0.0 0.0 2.3263942807923E-4 6 0.0 5.81598570198075E-5 0.0 0.0 3.48959142118845E-4 7 0.0 5.81598570198075E-5 0.0 0.0 3.48959142118845E-4 8 0.0 5.81598570198075E-5 0.0 0.0 3.48959142118845E-4 9 0.0 5.81598570198075E-5 0.0 0.0 3.48959142118845E-4 10 0.0 5.81598570198075E-5 0.0 0.0 3.48959142118845E-4 11 0.0 5.81598570198075E-5 0.0 0.0 4.071189991386525E-4 12 0.0 5.81598570198075E-5 0.0 0.0 7.560781412574975E-4 13 0.0 5.81598570198075E-5 0.0 0.0 9.3055771231692E-4 14 0.0 5.81598570198075E-5 0.0 5.81598570198075E-5 9.3055771231692E-4 15 0.0 5.81598570198075E-5 0.0 5.81598570198075E-5 9.887175693367276E-4 16 0.0 5.81598570198075E-5 0.0 5.81598570198075E-5 0.0011050372833763425 17 0.0 5.81598570198075E-5 0.0 5.81598570198075E-5 0.0011050372833763425 18 0.0 5.81598570198075E-5 0.0 5.81598570198075E-5 0.0011631971403961501 19 0.0 5.81598570198075E-5 0.0 1.16319714039615E-4 0.0011631971403961501 20 0.0 5.81598570198075E-5 0.0 4.6527885615846E-4 0.001279516854435765 21 0.0 5.81598570198075E-5 0.0 7.560781412574975E-4 0.00139583656847538 22 0.0 5.81598570198075E-5 0.0 0.001046877426356535 0.001512156282514995 23 0.0 5.81598570198075E-5 0.0 0.001279516854435765 0.0015703161395348025 24 0.0 5.81598570198075E-5 0.0 0.00209375485271307 0.00162847599655461 25 0.0 5.81598570198075E-5 0.0 0.002442713994831915 0.00162847599655461 26 0.0 5.81598570198075E-5 0.0 0.002849832993970568 0.0017447957105942251 27 0.0 5.81598570198075E-5 0.0 0.00372223084926768 0.00186111542463384 28 0.0 5.81598570198075E-5 0.0 0.004071189991386525 0.00186111542463384 29 0.0 5.81598570198075E-5 0.0 0.005932305416020365 0.00186111542463384 30 0.0 5.81598570198075E-5 0.0 0.008491339124891896 0.00186111542463384 31 0.0 5.81598570198075E-5 0.0 0.013493086828595341 0.00186111542463384 32 0.0 5.81598570198075E-5 0.0 0.01890195353143744 0.00186111542463384 33 0.0 5.81598570198075E-5 0.0 0.02308946323686358 0.00209375485271307 34 0.0 5.81598570198075E-5 0.0 0.028963608795864137 0.002210074566752685 35 0.0 5.81598570198075E-5 0.0 0.03594279163824104 0.002210074566752685 36 0.0 5.81598570198075E-5 0.0 0.04513204904737062 0.002210074566752685 37 0.0 5.81598570198075E-5 0.0 0.06013729215848096 0.002210074566752685 38 0.0 5.81598570198075E-5 0.0 0.07758524926442321 0.0022682344237724924 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 1945 0.0 25.23436 1 GGTATCA 930 0.0 23.192636 1 TAGGACG 455 0.0 19.822786 4 CTAGCGG 350 0.0 18.227823 29 GGCGTTA 520 0.0 17.771603 42 AATACCG 75 0.0012917777 17.598768 5 GTCCTAC 740 0.0 17.547987 1 TCAACGC 2775 0.0 17.519493 4 ATACCGT 440 0.0 17.498775 6 CGCAATA 365 0.0 17.479753 36 CGGATCG 140 8.382085E-8 17.285006 26 ATCAACG 2815 0.0 17.114254 3 AACGCAG 2815 0.0 17.114254 6 CGTTATT 530 0.0 17.022131 44 GTATAGA 220 1.8189894E-12 17.007217 1 CAACGCA 2865 0.0 16.969143 5 ACCGTCG 445 0.0 16.807812 8 TAGCGGC 395 0.0 16.708176 30 TACCGTC 490 0.0 16.61108 7 GTAGGAC 765 0.0 16.391008 3 >>END_MODULE