##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062244_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1930264 Sequences flagged as poor quality 0 Sequence length 25 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.243197821645122 32.0 32.0 32.0 32.0 32.0 2 30.80885567984483 32.0 32.0 32.0 32.0 32.0 3 30.839095584852643 32.0 32.0 32.0 32.0 32.0 4 30.83455579133217 32.0 32.0 32.0 32.0 32.0 5 30.76831977387549 32.0 32.0 32.0 32.0 32.0 6 34.42167962517044 36.0 36.0 36.0 32.0 36.0 7 34.355754964087815 36.0 36.0 36.0 32.0 36.0 8 34.29711220848547 36.0 36.0 36.0 32.0 36.0 9 34.421322679177564 36.0 36.0 36.0 32.0 36.0 10 34.13583116091892 36.0 36.0 36.0 32.0 36.0 11 34.422353626239726 36.0 36.0 36.0 32.0 36.0 12 34.266930844692745 36.0 36.0 36.0 32.0 36.0 13 34.34380737557142 36.0 36.0 36.0 32.0 36.0 14 34.247348031150146 36.0 36.0 36.0 32.0 36.0 15 34.20688361799215 36.0 36.0 36.0 32.0 36.0 16 34.20855230165407 36.0 36.0 36.0 32.0 36.0 17 34.14389223443011 36.0 36.0 36.0 32.0 36.0 18 34.150850350003935 36.0 36.0 36.0 32.0 36.0 19 34.15610507163787 36.0 36.0 36.0 32.0 36.0 20 34.13272744039158 36.0 36.0 36.0 32.0 36.0 21 34.106382339410565 36.0 36.0 36.0 32.0 36.0 22 34.08628767878383 36.0 36.0 36.0 32.0 36.0 23 34.05398484352399 36.0 36.0 36.0 32.0 36.0 24 34.03004148655314 36.0 36.0 36.0 32.0 36.0 25 33.682550158941986 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 3 2.0 4 34.0 5 121.0 6 426.0 7 108.0 8 312.0 9 257.0 10 150.0 11 31.0 12 66.0 13 85.0 14 393.0 15 490.0 16 743.0 17 1008.0 18 1378.0 19 1876.0 20 2739.0 21 3828.0 22 5600.0 23 8082.0 24 11509.0 25 15851.0 26 21877.0 27 27909.0 28 37316.0 29 49322.0 30 64575.0 31 87689.0 32 125252.0 33 180187.0 34 398352.0 35 882696.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.23250133273099 17.105945508528183 11.860243792633792 25.801309366107034 2 16.699123484592985 19.021508534873853 37.698399746769475 26.58096823376369 3 19.069345760016162 22.93386107016949 28.0246910382307 29.97210213158365 4 13.06219324728239 15.256072622256807 34.60955589278674 37.072178237674066 5 15.068500959780431 36.069398551415624 33.27432307494579 15.58777741385815 6 35.248377979924065 34.4598139212763 16.254258515475804 14.03754958332383 7 30.979518470922702 29.96897743785375 20.070280468439652 18.9812236227839 8 28.224161510300544 33.29801540193725 18.733958476277603 19.7438646114846 9 27.112811203319502 14.672302904564315 18.376192946058094 39.83869294605809 10 16.50969480229119 26.99174263669158 30.840250781487487 25.658311779529747 11 36.938603572102984 21.549083732965897 21.607342586962883 19.904970107968232 12 24.495236237688577 23.589532639306395 28.56047594568476 23.354755177320268 13 29.561917526981723 19.920959769778083 24.835583561001496 25.681539142238698 14 23.626270463829513 19.123449977075115 25.199373870612373 32.05090568848299 15 25.348860009368295 26.946034789257485 22.098176191358036 25.606929010016188 16 25.71222880533528 26.03282059048847 23.26570010223045 24.9892505019458 17 24.174175186638873 26.092614790751277 24.938262511793795 24.794947510816055 18 24.5740990836803 25.38466964154204 25.75367658499244 24.287554689785225 19 25.412984857913294 24.97744243932794 25.414799834059327 24.19477286869944 20 25.900928346270096 24.489456220251878 25.04014813716273 24.56946729631529 21 26.25062548775081 24.350957612023887 24.899416384278933 24.499000515946374 22 25.876227444452223 24.202313442704565 25.116592637537305 24.804866475305907 23 24.826641474763335 24.570764602610513 25.343787558421333 25.258806364204823 24 24.554949958283444 24.859281168540583 25.34256058234132 25.243208290834644 25 24.917840850286275 24.670248587816697 25.297914417595592 25.11399614430144 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 243.0 1 243.0 2 545.5 3 848.0 4 848.0 5 848.0 6 1712.5 7 2577.0 8 2577.0 9 2577.0 10 3103.5 11 3630.0 12 3630.0 13 3630.0 14 4733.0 15 5836.0 16 5836.0 17 5836.0 18 9455.5 19 13075.0 20 13075.0 21 13075.0 22 19659.5 23 26244.0 24 26244.0 25 26244.0 26 37094.5 27 47945.0 28 47945.0 29 47945.0 30 61008.5 31 74072.0 32 74072.0 33 74072.0 34 92357.5 35 110643.0 36 110643.0 37 110643.0 38 132885.5 39 155128.0 40 155128.0 41 155128.0 42 179448.5 43 203769.0 44 203769.0 45 203769.0 46 225432.0 47 247095.0 48 247095.0 49 247095.0 50 256817.0 51 266539.0 52 266539.0 53 266539.0 54 253939.0 55 241339.0 56 241339.0 57 241339.0 58 221702.5 59 202066.0 60 202066.0 61 202066.0 62 174954.5 63 147843.0 64 147843.0 65 147843.0 66 119733.0 67 91623.0 68 91623.0 69 91623.0 70 69268.5 71 46914.0 72 46914.0 73 46914.0 74 35076.5 75 23239.0 76 23239.0 77 23239.0 78 17473.5 79 11708.0 80 11708.0 81 11708.0 82 8121.5 83 4535.0 84 4535.0 85 4535.0 86 3211.0 87 1887.0 88 1887.0 89 1887.0 90 1217.0 91 547.0 92 547.0 93 547.0 94 372.5 95 198.0 96 198.0 97 198.0 98 459.5 99 721.0 100 721.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 8.807085455668239E-4 2 3.626446952333981E-4 3 4.6625746530008327E-4 4 0.008651666300568213 5 0.03398498858187274 6 0.061545985419610996 7 0.10309470621635175 8 0.10698018509385245 9 0.11728965571548762 10 0.13107015413435674 11 0.1378049841886913 12 0.12853164126772298 13 0.12355822830452208 14 0.1154246258542873 15 0.12873886680785634 16 0.11744507487058764 17 0.1213823601331217 18 0.10962231073055291 19 0.09656710170215058 20 0.09226717174438315 21 0.09164549512398304 22 0.10200677213065155 23 0.08299382882341483 24 0.09185272066411641 25 0.08755279070634897 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 1930264.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 47.66085045667338 #Duplication Level Percentage of deduplicated Percentage of total 1 67.8753186810201 32.349954133551485 2 16.14037151998883 15.385276666586753 3 6.478404868310508 9.262988568789957 4 3.183463906124849 6.06906388656135 5 1.7815393288784842 4.245483976817985 6 1.1270387299957405 3.222937462152365 7 0.707347608503392 2.3598952012836 8 0.4861036794733087 1.8534491819052843 9 0.3675886063629568 1.5767627037697678 >10 1.7112475522355286 14.147132531033375 >50 0.08779481320478043 2.8701878271363777 >100 0.04877371070150224 4.50803958252481 >500 0.004245061147745083 1.3699876188995157 >1k 7.619340521593735E-4 0.7788406589873682 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 4869 0.2522452887273451 No Hit TATCAACGCAGAGTACTTTTTTTTT 3201 0.16583223849172962 No Hit GGTATCAACGCAGAGTACTTTTTTT 2021 0.10470070415238537 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 5.180638503334259E-5 2 0.0 0.0 0.0 0.0 5.180638503334259E-5 3 0.0 0.0 0.0 0.0 5.180638503334259E-5 4 0.0 0.0 0.0 0.0 5.180638503334259E-5 5 0.0 0.0 0.0 0.0 5.180638503334259E-5 6 0.0 0.0 0.0 0.0 1.0361277006668518E-4 7 0.0 0.0 0.0 5.180638503334259E-5 1.0361277006668518E-4 8 0.0 0.0 0.0 5.180638503334259E-5 1.0361277006668518E-4 9 0.0 0.0 0.0 1.0361277006668518E-4 1.0361277006668518E-4 10 0.0 0.0 0.0 1.0361277006668518E-4 1.0361277006668518E-4 11 0.0 0.0 0.0 1.0361277006668518E-4 1.0361277006668518E-4 12 0.0 0.0 0.0 1.0361277006668518E-4 2.5903192516671294E-4 13 0.0 0.0 0.0 1.0361277006668518E-4 2.5903192516671294E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTCTTAC 75 9.7253E-7 13.927076 1 GGTATCA 960 0.0 13.056634 1 CGCGTAA 95 7.376002E-8 13.001918 10 TCGCGTA 95 7.376002E-8 13.001918 9 GCGTAAC 100 1.4418038E-7 12.350862 11 GTATCAA 2625 0.0 12.226888 1 CCGTCGT 195 0.0 12.181284 9 TACCGTC 245 0.0 12.0221815 7 AACCGCT 65 8.0150296E-4 11.694034 7 CGTCGTA 190 0.0 11.501697 10 GTATTAG 100 1.940638E-6 11.39488 1 ATACCGT 235 0.0 11.320819 6 AAGAGCG 85 5.3175754E-5 11.17783 5 TTGCGCG 85 5.3288313E-5 11.175509 18 GGGTATA 85 5.3485805E-5 11.171452 1 ACCGTCG 225 0.0 10.979398 8 GTCTTAG 225 0.0 10.972848 1 ATTATCC 115 8.831521E-7 10.737927 3 GTAAGAC 115 8.831521E-7 10.737927 3 GTGTAGG 190 9.094947E-12 10.495284 1 >>END_MODULE