SRR4062240_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR4062240_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	135814
Sequences flagged as poor quality	0
Sequence length	50
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	714	0.525718998041439	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	451	0.3320718040849986	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	334	0.2459245733135023	No Hit
ATACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA	198	0.14578762130560916	No Hit
TATCAACGCAGAGTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAA	194	0.14284241683478874	No Hit
GTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA	178	0.1310615989515072	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGG	165	0.12148968442134095	No Hit
GTATCAACGCAGAGTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAA	137	0.10087325312559824	No Hit
ACGCAGAGTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAA	136	0.10013695200789316	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AACCGCG	25	0.002345566	35.199707	41
AATAGAA	25	0.002345566	35.199707	36
CGCGGTC	30	0.005727539	29.333088	44
TCCGAAA	30	0.005727539	29.333088	21
TTCCGAA	30	0.005727539	29.333088	20
ACTGTTC	30	0.005727539	29.333088	8
AACTGCC	30	0.005727539	29.333088	7
ATACATG	135	0.0	27.713675	1
ATAGAAC	50	8.2885E-5	26.39978	37
TCCTGCA	45	0.0013919082	24.44424	2
TCAGTTC	45	0.0013919082	24.44424	16
AAATTTA	65	1.798182E-5	23.692108	44
TTAGGAC	85	2.3210669E-7	23.293922	3
GATTTCG	50	0.002568895	21.999817	41
ATTTCGT	50	0.002568895	21.999817	42
GACGTGA	80	3.5768317E-6	21.999815	7
GTCCTAC	105	7.590643E-8	20.959923	1
CTTTAGG	95	6.750997E-7	20.849607	1
ATAACGC	65	4.9015076E-4	20.307522	3
GGACGTG	120	1.4037141E-8	20.166498	6