##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062240_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 135814 Sequences flagged as poor quality 0 Sequence length 50 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.86857761350082 32.0 32.0 32.0 32.0 32.0 2 31.28919699000103 32.0 32.0 32.0 32.0 32.0 3 31.4959577068638 32.0 32.0 32.0 32.0 32.0 4 31.66296552638167 32.0 32.0 32.0 32.0 32.0 5 31.62888951065428 32.0 32.0 32.0 32.0 32.0 6 35.25283107779757 36.0 36.0 36.0 36.0 36.0 7 35.23636002179451 36.0 36.0 36.0 36.0 36.0 8 35.20335164268779 36.0 36.0 36.0 36.0 36.0 9 35.22360728643586 36.0 36.0 36.0 36.0 36.0 10 35.1386675894974 36.0 36.0 36.0 36.0 36.0 11 35.25566583710074 36.0 36.0 36.0 36.0 36.0 12 35.173877508946056 36.0 36.0 36.0 36.0 36.0 13 35.20439719027493 36.0 36.0 36.0 36.0 36.0 14 35.172684701135374 36.0 36.0 36.0 36.0 36.0 15 35.179075794837054 36.0 36.0 36.0 36.0 36.0 16 35.17747065840046 36.0 36.0 36.0 36.0 36.0 17 35.16107323250917 36.0 36.0 36.0 36.0 36.0 18 35.15009498284418 36.0 36.0 36.0 36.0 36.0 19 35.111093112639345 36.0 36.0 36.0 36.0 36.0 20 35.03146214675954 36.0 36.0 36.0 36.0 36.0 21 35.00094246543066 36.0 36.0 36.0 36.0 36.0 22 35.03504057019158 36.0 36.0 36.0 36.0 36.0 23 35.04143902690444 36.0 36.0 36.0 36.0 36.0 24 35.04683611409722 36.0 36.0 36.0 36.0 36.0 25 35.01756078165727 36.0 36.0 36.0 36.0 36.0 26 34.98919109959209 36.0 36.0 36.0 36.0 36.0 27 34.974148467757374 36.0 36.0 36.0 36.0 36.0 28 34.96522449821079 36.0 36.0 36.0 36.0 36.0 29 34.90389061510595 36.0 36.0 36.0 32.0 36.0 30 34.86570603914177 36.0 36.0 36.0 32.0 36.0 31 34.85162059876007 36.0 36.0 36.0 32.0 36.0 32 34.793636885740796 36.0 36.0 36.0 32.0 36.0 33 34.69434668001826 36.0 36.0 36.0 32.0 36.0 34 34.63800491849147 36.0 36.0 36.0 32.0 36.0 35 34.566016758213436 36.0 36.0 36.0 32.0 36.0 36 34.49323339272829 36.0 36.0 36.0 32.0 36.0 37 34.490545893648665 36.0 36.0 36.0 32.0 36.0 38 34.43404214587598 36.0 36.0 36.0 32.0 36.0 39 34.358335664953536 36.0 36.0 36.0 32.0 36.0 40 34.31923071259222 36.0 36.0 36.0 32.0 36.0 41 34.25844905532566 36.0 36.0 36.0 32.0 36.0 42 34.171212098899964 36.0 36.0 36.0 32.0 36.0 43 34.12977307199552 36.0 36.0 36.0 32.0 36.0 44 34.00494794351098 36.0 36.0 36.0 32.0 36.0 45 33.89276510521743 36.0 36.0 36.0 32.0 36.0 46 33.73859837719234 36.0 36.0 36.0 32.0 36.0 47 33.609701503526885 36.0 36.0 36.0 27.0 36.0 48 33.48575257337241 36.0 36.0 36.0 21.0 36.0 49 33.41467006346916 36.0 36.0 36.0 21.0 36.0 50 33.02195649932997 36.0 36.0 36.0 14.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 2.0 19 2.0 20 4.0 21 10.0 22 25.0 23 58.0 24 154.0 25 290.0 26 645.0 27 1126.0 28 1997.0 29 2815.0 30 3763.0 31 5163.0 32 6969.0 33 10653.0 34 20458.0 35 81680.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.75273632573693 18.822090950606192 12.728518185701871 23.696654537955013 2 15.122931807638782 21.233073405641832 39.03259773060299 24.6113970561164 3 18.48571197160802 26.78315036115836 29.061282793252484 25.669854873981134 4 11.529739202144109 15.985833566495353 35.490450174503366 36.993977056857176 5 12.778505897771952 38.78171617064515 32.291221818074725 16.14855611350818 6 31.650639845671286 36.443223820813756 17.48347003990752 14.422666293607433 7 27.977969870558262 32.2735505912498 21.046431148482483 18.702048389709454 8 28.700281267026963 32.2021293828324 19.376500213527322 19.72108913661331 9 28.294579351171457 13.31379681034356 19.993520550164195 38.39810328832079 10 16.852459982034254 27.737935706186402 30.755297686541887 24.654306625237457 11 35.03541608376162 22.130266393744385 23.240608479243672 19.593709043250325 12 25.340539266938606 25.329494750173033 29.441736492555997 19.888229490332364 13 30.16331158790699 20.877081891410313 26.470025181498226 22.489581339184472 14 23.438673479906342 20.438246425258075 28.529459407719383 27.593620687116204 15 23.7508651538133 28.142901320924206 25.85079594150824 22.255437583754254 16 22.579576329217378 26.490100358581287 27.35746946168629 23.572853850515045 17 21.101653732310368 26.60035047933203 28.120812287393054 24.177183500964556 18 21.647989161647548 24.334751940153446 31.90466373127954 22.112595166919462 19 23.651464502923115 23.852474708056608 31.234629714167905 21.26143107485237 20 24.872251756078164 22.820916842151767 30.50274640316904 21.804084998601027 21 25.438467315593382 22.8260709499757 29.639801493218666 22.095660241212244 22 24.200745136731115 23.769272681755933 30.239150603030616 21.790831578482337 23 22.225985539046047 24.340642349095084 31.085896888391478 22.347475223467388 24 22.714320425879702 24.49029179828146 30.947700146525005 21.847687629313835 25 22.526396395069728 24.497474487166272 31.214013282872166 21.762115834891837 26 21.770375442704307 25.518175726918628 31.482258693939464 21.2291901364376 27 21.870352099194488 25.021720882972296 31.026992798975066 22.080934218858143 28 21.356149354617816 25.18573605967116 31.203658024754986 22.254456560956033 29 21.53344328925279 24.968338585691985 31.067210555768266 22.431007569286958 30 21.38029040143728 25.462403911289133 31.14378699967602 22.01351868759756 31 22.3923895916474 25.08062497238871 30.268602647738817 22.258382788225074 32 21.621800724530967 25.82540570789032 30.39422142373281 22.158572143845905 33 21.509722927849324 25.476942560726883 31.213506807153955 21.79982770426984 34 22.12102023385268 25.349011869348804 30.67843784054428 21.851530056254234 35 22.49031764030218 25.612970680489493 30.534407351230357 21.36230432797797 36 21.609860617172142 26.324431387275148 30.358654915214302 21.707053080338408 37 22.2522476088093 26.318928510945355 29.791401285610146 21.63742259463519 38 21.923365779669254 26.517148453031353 30.087472572783362 21.47201319451603 39 22.538913514070714 26.32055605460409 29.506530990914044 21.63399944041115 40 22.471173811241847 26.60918609274449 29.92180482129972 20.997835274713946 41 21.916900443992844 26.7743146826887 30.195194863525582 21.113590009792876 42 22.44221749342837 27.591284947463755 29.247999057513752 20.718498501594127 43 21.699176036581324 27.062669818197882 29.30703130177384 21.93112284344695 44 21.58494289522323 27.61721022363276 28.760778480593213 22.037068400550798 45 21.787055445107136 27.960385833149253 28.196745453206685 22.055813268536927 46 21.473223818394683 27.669334589981666 28.013931124872066 22.84351046675159 47 22.338232262244865 27.71920007068595 27.672812417164906 22.26975524990428 48 22.455876830642133 28.57532047742116 26.655033023348278 22.313769668588428 49 22.42323834769163 28.41690597157794 26.62616891245122 22.533686768279214 50 22.251183612761665 29.352860182751282 26.100594199377085 22.29536200510997 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 69.0 1 64.5 2 60.0 3 181.5 4 303.0 5 310.0 6 317.0 7 245.0 8 173.0 9 244.5 10 316.0 11 478.5 12 641.0 13 1125.0 14 1609.0 15 2084.0 16 2559.0 17 2476.0 18 2393.0 19 2278.5 20 2164.0 21 2139.5 22 2115.0 23 1856.0 24 1597.0 25 1446.0 26 1295.0 27 1553.0 28 1811.0 29 2110.5 30 2410.0 31 2905.0 32 3400.0 33 3977.0 34 4554.0 35 4888.5 36 5223.0 37 5545.0 38 5867.0 39 5928.0 40 5989.0 41 6281.5 42 6574.0 43 6686.0 44 6798.0 45 7220.5 46 7643.0 47 7977.5 48 8312.0 49 8541.0 50 8770.0 51 8453.5 52 8137.0 53 8135.5 54 8134.0 55 8036.0 56 7938.0 57 7673.5 58 7409.0 59 6732.0 60 6055.0 61 5335.5 62 4616.0 63 3925.0 64 3234.0 65 2793.5 66 2353.0 67 2003.0 68 1653.0 69 1457.0 70 1261.0 71 1029.5 72 798.0 73 646.5 74 495.0 75 372.5 76 250.0 77 219.0 78 188.0 79 165.5 80 143.0 81 110.0 82 77.0 83 65.0 84 53.0 85 45.5 86 38.0 87 24.0 88 10.0 89 7.0 90 4.0 91 3.5 92 3.0 93 2.0 94 1.0 95 1.0 96 1.0 97 1.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.03534245364984464 2 0.005154107823935676 3 7.363011177050966E-4 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 7.363011177050966E-4 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 7.363011177050966E-4 25 0.0 26 7.363011177050966E-4 27 0.0 28 0.00220890335311529 29 0.0014726022354101932 30 0.0014726022354101932 31 0.0 32 0.0014726022354101932 33 7.363011177050966E-4 34 0.0014726022354101932 35 0.0 36 7.363011177050966E-4 37 0.00220890335311529 38 0.0 39 0.0 40 0.0 41 7.363011177050966E-4 42 0.00220890335311529 43 0.005154107823935676 44 0.008099312294756064 45 0.0029452044708203865 46 0.00220890335311529 47 0.0014726022354101932 48 7.363011177050966E-4 49 0.0029452044708203865 50 7.363011177050966E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 135814.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 73.03738937075707 #Duplication Level Percentage of deduplicated Percentage of total 1 87.31186047683856 63.77030350332071 2 8.776652048994404 12.820475061481144 3 1.772266747315893 3.88325209477668 4 0.6099097736781088 1.7818487048463338 5 0.34074298099702605 1.2443488889216134 6 0.21775291093301075 0.9542462485458054 7 0.1421442613034931 0.7267292031749304 8 0.10282776349614395 0.6008217120473589 9 0.07863299561469832 0.5168833846289779 >10 0.5665608145571853 7.9491068667442235 >50 0.06250315036040123 3.1425331703653523 >100 0.01713796058269066 2.0837321631054238 >500 0.0010081153283935682 0.525718998041439 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 714 0.525718998041439 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 451 0.3320718040849986 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 334 0.2459245733135023 No Hit ATACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA 198 0.14578762130560916 No Hit TATCAACGCAGAGTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAA 194 0.14284241683478874 No Hit GTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA 178 0.1310615989515072 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGG 165 0.12148968442134095 No Hit GTATCAACGCAGAGTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAA 137 0.10087325312559824 No Hit ACGCAGAGTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAA 136 0.10013695200789316 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 7.363011177050967E-4 13 0.0 0.0 0.0 0.0 7.363011177050967E-4 14 0.0 0.0 0.0 0.0 7.363011177050967E-4 15 0.0 0.0 0.0 0.0 7.363011177050967E-4 16 0.0 0.0 0.0 0.0 7.363011177050967E-4 17 0.0 0.0 0.0 0.0 7.363011177050967E-4 18 0.0 0.0 0.0 0.0014726022354101934 7.363011177050967E-4 19 0.0 0.0 0.0 0.0014726022354101934 7.363011177050967E-4 20 0.0 0.0 0.0 0.0014726022354101934 7.363011177050967E-4 21 0.0 0.0 0.0 0.0014726022354101934 0.0014726022354101934 22 0.0 0.0 0.0 0.002945204470820387 0.0014726022354101934 23 0.0 0.0 0.0 0.005890408941640774 0.0014726022354101934 24 0.0 0.0 0.0 0.00883561341246116 0.0014726022354101934 25 0.0 0.0 0.0 0.01619862458951213 0.0014726022354101934 26 0.0 0.0 0.0 0.016934925707217222 0.0014726022354101934 27 0.0 0.0 0.0 0.019880130178037612 0.0014726022354101934 28 0.0 0.0 0.0 0.027979442472793672 0.0014726022354101934 29 0.0 0.0 0.0 0.03755135700295993 0.0014726022354101934 30 0.0 0.0 0.0 0.0662671005934587 0.0014726022354101934 31 0.0 0.0 0.0 0.09645544641936767 0.0014726022354101934 32 0.0 0.0 0.0 0.13842461012855817 0.0014726022354101934 33 0.0 0.0 0.0 0.16714035371905694 0.0014726022354101934 34 0.0 0.0 0.0 0.19364719395644042 0.0014726022354101934 35 0.0 0.0 0.0 0.22678074425316977 0.0014726022354101934 36 0.0 0.0 0.0 0.27758552137482145 0.0014726022354101934 37 0.0 0.0 0.0 0.3467978264391005 0.0014726022354101934 38 0.0 0.0 0.0 0.4182190348564949 0.0014726022354101934 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AACCGCG 25 0.002345566 35.199707 41 AATAGAA 25 0.002345566 35.199707 36 CGCGGTC 30 0.005727539 29.333088 44 TCCGAAA 30 0.005727539 29.333088 21 TTCCGAA 30 0.005727539 29.333088 20 ACTGTTC 30 0.005727539 29.333088 8 AACTGCC 30 0.005727539 29.333088 7 ATACATG 135 0.0 27.713675 1 ATAGAAC 50 8.2885E-5 26.39978 37 TCCTGCA 45 0.0013919082 24.44424 2 TCAGTTC 45 0.0013919082 24.44424 16 AAATTTA 65 1.798182E-5 23.692108 44 TTAGGAC 85 2.3210669E-7 23.293922 3 GATTTCG 50 0.002568895 21.999817 41 ATTTCGT 50 0.002568895 21.999817 42 GACGTGA 80 3.5768317E-6 21.999815 7 GTCCTAC 105 7.590643E-8 20.959923 1 CTTTAGG 95 6.750997E-7 20.849607 1 ATAACGC 65 4.9015076E-4 20.307522 3 GGACGTG 120 1.4037141E-8 20.166498 6 >>END_MODULE