SRR4062239_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR4062239_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	202643
Sequences flagged as poor quality	0
Sequence length	25
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTT	785	0.38738076321412535	No Hit
TATCAACGCAGAGTACTTTTTTTTT	644	0.31780026943935885	No Hit
GGTATCAACGCAGAGTACTTTTTTT	394	0.19443059962594317	No Hit
ACGCAGAGTACTTTTTTTTTTTTTT	258	0.12731749924744504	No Hit
CTCCTGGTGGTGCCCTTCCGTCAAT	228	0.11251313886983512	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	120	0.0	15.03619	1
AGGCCCG	40	0.00524497	14.255378	10
ATTTGCC	40	0.005262215	14.248332	16
TGCCAAG	60	2.5553152E-5	14.244811	19
TTGCCAA	60	4.0772694E-4	12.662055	18
AAAGCAT	55	0.003043989	12.095473	11
CGTCAAT	55	0.0030609563	12.086507	19
CACACAG	80	2.8338169E-5	11.876545	5
ATGTGGT	60	0.005829359	11.087517	7
GCAGGCC	60	0.005829359	11.087517	8
CCAGCCC	60	0.0058508706	11.082036	3
CGAGCCG	60	0.0058508706	11.082036	15
CAAAGCA	60	0.0058508706	11.082036	4
CCGTCAA	60	0.0058616516	11.079298	18
GTATCAA	275	0.0	11.050519	1
TCAAAGC	70	0.0014831607	10.855871	3
AGCCGCC	70	0.0014862244	10.8531885	17
GTTCAAA	80	3.7528336E-4	10.683609	1
TTCAAAG	85	6.562249E-4	10.0551605	2
CTGTGTG	95	1.621641E-4	10.003774	9