##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062239_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 202643 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.058536440933068 32.0 32.0 32.0 21.0 32.0 2 28.584880800225026 32.0 32.0 32.0 14.0 32.0 3 30.35375512600978 32.0 32.0 32.0 21.0 32.0 4 30.93304481279886 32.0 32.0 32.0 32.0 32.0 5 30.624635442625703 32.0 32.0 32.0 32.0 32.0 6 34.18800057243527 36.0 36.0 36.0 32.0 36.0 7 34.214934638748936 36.0 36.0 36.0 32.0 36.0 8 34.03656183534591 36.0 36.0 36.0 32.0 36.0 9 34.40952808633903 36.0 36.0 36.0 32.0 36.0 10 33.90236030852287 36.0 36.0 36.0 32.0 36.0 11 34.577577315772075 36.0 36.0 36.0 32.0 36.0 12 34.23469845985304 36.0 36.0 36.0 32.0 36.0 13 34.436728631139495 36.0 36.0 36.0 32.0 36.0 14 34.302206343174944 36.0 36.0 36.0 32.0 36.0 15 34.18387509067671 36.0 36.0 36.0 32.0 36.0 16 34.25077599522313 36.0 36.0 36.0 32.0 36.0 17 34.18158534960497 36.0 36.0 36.0 32.0 36.0 18 34.19938019077886 36.0 36.0 36.0 32.0 36.0 19 34.21695296654708 36.0 36.0 36.0 32.0 36.0 20 34.24185390070222 36.0 36.0 36.0 32.0 36.0 21 34.22416762483777 36.0 36.0 36.0 32.0 36.0 22 34.18650533203713 36.0 36.0 36.0 32.0 36.0 23 34.108950222805625 36.0 36.0 36.0 32.0 36.0 24 34.067275948342655 36.0 36.0 36.0 32.0 36.0 25 34.03770177109498 36.0 36.0 36.0 32.0 36.0 26 33.954150895910544 36.0 36.0 36.0 32.0 36.0 27 33.89183934308118 36.0 36.0 36.0 32.0 36.0 28 33.87510548106769 36.0 36.0 36.0 32.0 36.0 29 33.806151705215576 36.0 36.0 36.0 32.0 36.0 30 33.768252542648895 36.0 36.0 36.0 32.0 36.0 31 33.79772802416072 36.0 36.0 36.0 32.0 36.0 32 33.74739813366364 36.0 36.0 36.0 32.0 36.0 33 33.67896251042474 36.0 36.0 36.0 27.0 36.0 34 33.63924241153161 36.0 36.0 36.0 27.0 36.0 35 33.656573382747 36.0 36.0 36.0 27.0 36.0 36 33.5686946995455 36.0 36.0 36.0 27.0 36.0 37 33.60451631687253 36.0 36.0 36.0 27.0 36.0 38 33.53495062745814 36.0 36.0 36.0 27.0 36.0 39 33.50690623411616 36.0 36.0 36.0 21.0 36.0 40 33.481541430002515 36.0 36.0 36.0 21.0 36.0 41 33.41028804350508 36.0 36.0 36.0 21.0 36.0 42 33.358255651564576 36.0 36.0 36.0 21.0 36.0 43 33.373341294789356 36.0 36.0 36.0 21.0 36.0 44 33.28454967603125 36.0 36.0 36.0 21.0 36.0 45 33.24555499079662 36.0 36.0 36.0 21.0 36.0 46 33.231421761422794 36.0 36.0 36.0 21.0 36.0 47 33.20004638699585 36.0 36.0 36.0 21.0 36.0 48 33.12980956657768 36.0 36.0 36.0 21.0 36.0 49 33.06421144574448 36.0 36.0 36.0 14.0 36.0 50 32.440395177726344 36.0 32.0 36.0 14.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 2.0 20 5.0 21 6.0 22 31.0 23 83.0 24 184.0 25 491.0 26 1036.0 27 1937.0 28 3563.0 29 5984.0 30 9975.0 31 15995.0 32 25042.0 33 38936.0 34 55651.0 35 43721.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.6852557395819 19.218469313224233 13.823854551197268 25.272420395996605 2 18.267147658127588 21.12299333290564 35.61442382190814 24.995435187058632 3 21.55761610319626 23.213237072092298 28.915876689547627 26.31327013516381 4 16.12096149385866 17.207601545575223 35.61830411117088 31.053132849395244 5 20.113697487700044 32.67371683206427 30.636143365425895 16.57644231480979 6 34.87727124682938 36.012771291242686 15.108417800850763 14.00153966107717 7 29.857434009563615 30.635156408067388 19.30735332579956 20.200056256569436 8 28.003928090286863 33.39172831037835 17.619656242752033 20.98468735658276 9 26.094165601575188 14.127801108353113 17.962130446154074 41.81590284391763 10 16.607037992923516 26.25503965101188 30.209777786550735 26.928144569513872 11 37.725458071584015 20.67774361808698 21.150002714132736 20.446795596196267 12 23.99046599191682 23.192510967563646 27.915595406700454 24.901427633819083 13 29.3836944774801 19.126246650513465 24.512566434567194 26.97749243743924 14 23.458989454360623 18.768474608054557 24.407948954565416 33.3645869830194 15 25.299171449297532 26.323633187428136 21.694309697349524 26.682885665924804 16 25.55775427722645 26.140059118745775 23.08789348756187 25.214293116465903 17 24.005270352294428 26.331528846296198 24.401040253055868 25.262160548353506 18 24.859975424761775 25.28239317420291 25.3218714685432 24.535759932492116 19 25.37763455929887 25.611049974585846 24.89599936834729 24.115316097767998 20 25.86963280251477 24.43064897381109 24.473581618906152 25.22613660476799 21 26.00731335402654 24.50022946758585 24.49282728739705 24.999629890990562 22 25.48422595401766 24.641857848531654 24.654194815512994 25.219721381937692 23 24.50022946758585 24.372911968338407 25.42698242722423 25.699876136851508 24 24.445080486769772 25.105851699055474 25.145823669328177 25.303244144846577 25 24.75979925287328 24.287540156827525 25.438332436847066 25.51432815345213 26 24.62470761243967 25.035777380799633 25.208002289752372 25.13151271700832 27 24.8362884481576 24.949295065706686 25.16395829118203 25.05045819495369 28 24.71242529966493 24.819510173062973 25.46843463628154 24.999629890990562 29 24.839000991901937 25.14397382563252 25.123741000093762 24.89328418237178 30 24.510340947784506 25.35173040006711 25.521488741172817 24.61643991097557 31 24.995682061556533 24.97544943570713 24.959658117971014 25.069210384765327 32 25.301270220388666 25.150264999358473 24.496896003789935 25.051568776462922 33 24.60928825570091 25.053912545708464 25.18123004495591 25.155569153634715 34 24.873792827780875 24.859975424761775 25.463499849489 24.802731897968346 35 25.74342929896073 24.69576889292447 24.96323565697141 24.597566151143397 36 24.304811910601405 25.4358650434508 24.978410307782653 25.280912738165146 37 25.443886262472738 24.845787151725705 25.081177643331586 24.62914894246997 38 24.838755841553866 24.75437098740149 25.215773552503663 25.19109961854098 39 25.172595871516624 25.2446444697766 24.815313781515094 24.767445877191683 40 25.435497083526613 25.449314554731988 24.922276724469754 24.192911637271642 41 24.65826432822416 25.15964114053355 25.449808035846466 24.732286495395822 42 25.5044784958176 25.714215214548325 24.717348927875243 24.063957361758828 43 24.841713589190633 24.906360572249174 25.27400944536836 24.977916393191833 44 24.965949467035138 25.46535728385314 24.803099091985786 24.765594157125935 45 24.88242754427781 25.85903148918531 24.75264137069991 24.505899595836972 46 24.501579155151994 25.419463087248324 25.004934859849982 25.074022897749703 47 24.81506521449474 25.21627130019394 25.450678299833697 24.517985185477624 48 25.61847657117477 25.61206109507242 24.352160288202924 24.417302045549878 49 24.74277169970539 25.668053355441394 24.75560227199826 24.83357267285495 50 25.36394232192734 25.30225718261762 24.530452719574424 24.803347775880617 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 2.0 1 1.0 2 0.0 3 4.0 4 8.0 5 9.5 6 11.0 7 13.0 8 15.0 9 20.0 10 25.0 11 48.5 12 72.0 13 121.0 14 170.0 15 227.0 16 284.0 17 361.0 18 438.0 19 491.5 20 545.0 21 708.0 22 871.0 23 1109.5 24 1348.0 25 1664.0 26 1980.0 27 2276.0 28 2572.0 29 2927.0 30 3282.0 31 3575.0 32 3868.0 33 4428.0 34 4988.0 35 5535.0 36 6082.0 37 6660.5 38 7239.0 39 7972.5 40 8706.0 41 9360.0 42 10014.0 43 10272.5 44 10531.0 45 11167.5 46 11804.0 47 12357.0 48 12910.0 49 13377.0 50 13844.0 51 13690.0 52 13536.0 53 13579.5 54 13623.0 55 13875.5 56 14128.0 57 13689.0 58 13250.0 59 12214.0 60 11178.0 61 10209.0 62 9240.0 63 8140.5 64 7041.0 65 6149.0 66 5257.0 67 4623.5 68 3990.0 69 3627.0 70 3264.0 71 2603.0 72 1942.0 73 1714.0 74 1486.0 75 1229.0 76 972.0 77 837.0 78 702.0 79 613.5 80 525.0 81 439.0 82 353.0 83 300.0 84 247.0 85 178.0 86 109.0 87 84.0 88 59.0 89 48.5 90 38.0 91 32.0 92 26.0 93 21.0 94 16.0 95 15.0 96 14.0 97 13.0 98 12.0 99 19.0 100 26.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0074021801888049426 2 0.002960872075521977 3 0.0 4 0.0 5 0.0 6 4.934786792536629E-4 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 4.934786792536629E-4 25 0.0 26 4.934786792536629E-4 27 0.0 28 0.0 29 9.869573585073257E-4 30 9.869573585073257E-4 31 0.0 32 4.934786792536629E-4 33 0.0 34 0.0 35 4.934786792536629E-4 36 0.0 37 4.934786792536629E-4 38 0.0 39 9.869573585073257E-4 40 4.934786792536629E-4 41 4.934786792536629E-4 42 0.003947829434029303 43 0.0019739147170146514 44 0.0014804360377609885 45 9.869573585073257E-4 46 0.0014804360377609885 47 0.0019739147170146514 48 0.003947829434029303 49 9.869573585073257E-4 50 4.934786792536629E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 202643.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 71.34846897656328 #Duplication Level Percentage of deduplicated Percentage of total 1 84.25816136247877 60.1169081199308 2 10.387455598143823 14.822581069791863 3 2.4361111067992374 5.214383931807799 4 1.0117331399887637 2.8874244220419705 5 0.516791002826321 1.8436123416260393 6 0.33694744317637926 1.4424410517721329 7 0.22401422584137248 1.1188150429926405 8 0.10599304189346252 0.6049953009013826 9 0.10496357449974808 0.6740091304978019 >10 0.5589900061939627 7.4062729662551545 >50 0.04216830701334483 2.1039518472606136 >100 0.016671191144810745 1.7646047751218048 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 268 0.13225228603998165 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATGGTCGGAACTACG 227 0.11201966019058146 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 14 0.0 0.0 0.0 0.0 0.0 15 0.0 0.0 0.0 0.0 0.0 16 0.0 0.0 0.0 0.0 0.0 17 0.0 0.0 0.0 0.0 0.0 18 0.0 0.0 0.0 0.0 0.0 19 0.0 0.0 0.0 0.0 0.0 20 0.0 0.0 0.0 0.0 0.0 21 0.0 0.0 0.0 0.0 0.0 22 0.0 0.0 0.0 0.0 0.0 23 0.0 0.0 0.0 0.0 0.0 24 0.0 0.0 0.0 0.0 0.0 25 0.0 0.0 0.0 0.0 0.0 26 0.0 0.0 0.0 0.0 0.0 27 0.0 0.0 0.0 0.0 0.0 28 0.0 0.0 0.0 0.0 0.0 29 0.0 0.0 0.0 0.0 0.0 30 0.0 0.0 0.0 0.0 0.0 31 0.0 0.0 0.0 0.0 0.0 32 0.0 0.0 0.0 0.0 0.0 33 0.0 0.0 0.0 0.0 0.0 34 0.0 0.0 0.0 9.869573585073257E-4 0.0 35 0.0 0.0 0.0 0.0014804360377609885 0.0 36 0.0 0.0 0.0 0.0014804360377609885 0.0 37 0.0 0.0 0.0 0.0014804360377609885 0.0 38 0.0 0.0 0.0 0.004441308113282965 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAACGCC 50 2.3486664E-6 30.8 4 GGTATCA 125 0.0 29.92 1 CGACCCG 30 0.0057338774 29.333332 5 GTATATG 30 0.0057338774 29.333332 1 TCGTTTA 50 8.307834E-5 26.4 30 CGTTTAT 50 8.307834E-5 26.4 31 ATAACGC 60 9.7007905E-6 25.666666 3 TAAACAC 45 0.001394205 24.444445 5 TCTACAC 45 0.001394205 24.444445 3 CAGGATA 45 0.001394205 24.444445 4 GGGTTAA 45 0.001394205 24.444445 1 GGTCGGA 55 1.587244E-4 24.0 38 AACGCCG 65 1.803746E-5 23.692307 5 CGGGTCA 60 2.8613643E-4 22.0 42 ACCATAC 50 0.0025731 22.0 1 CGGCATC 50 0.0025731 22.0 25 GTCTACA 60 2.8613643E-4 22.0 2 TCGGCAT 60 2.8613643E-4 22.0 24 GGCGGGT 90 4.0472332E-7 22.0 40 ACTCCCC 60 2.8613643E-4 22.0 6 >>END_MODULE