##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062238_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2614906 Sequences flagged as poor quality 0 Sequence length 25 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.168625946783557 32.0 32.0 32.0 32.0 32.0 2 30.58773623220108 32.0 32.0 32.0 32.0 32.0 3 30.629151105240496 32.0 32.0 32.0 32.0 32.0 4 30.640246723974016 32.0 32.0 32.0 32.0 32.0 5 30.515470536990623 32.0 32.0 32.0 32.0 32.0 6 34.175759664018514 36.0 36.0 36.0 32.0 36.0 7 34.09871635921138 36.0 36.0 36.0 32.0 36.0 8 34.03814898126357 36.0 36.0 36.0 32.0 36.0 9 34.223935009518506 36.0 36.0 36.0 32.0 36.0 10 33.81229229654909 36.0 36.0 36.0 32.0 36.0 11 34.216029180398834 36.0 36.0 36.0 32.0 36.0 12 33.983435733445106 36.0 36.0 36.0 32.0 36.0 13 34.100117556807014 36.0 36.0 36.0 32.0 36.0 14 33.98508665321048 36.0 36.0 36.0 32.0 36.0 15 33.913251183790166 36.0 36.0 36.0 32.0 36.0 16 33.92586196215084 36.0 36.0 36.0 32.0 36.0 17 33.848829365185594 36.0 36.0 36.0 32.0 36.0 18 33.85932152054414 36.0 36.0 36.0 32.0 36.0 19 33.870439702230215 36.0 36.0 36.0 32.0 36.0 20 33.85361538808661 36.0 36.0 36.0 32.0 36.0 21 33.83828864211562 36.0 36.0 36.0 32.0 36.0 22 33.804235792797144 36.0 36.0 36.0 32.0 36.0 23 33.759807044689175 36.0 36.0 36.0 32.0 36.0 24 33.73873668881405 36.0 36.0 36.0 32.0 36.0 25 33.35280847571576 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 3 1.0 4 48.0 5 200.0 6 558.0 7 130.0 8 455.0 9 343.0 10 194.0 11 50.0 12 117.0 13 119.0 14 368.0 15 564.0 16 869.0 17 1269.0 18 1828.0 19 2501.0 20 3954.0 21 5753.0 22 9031.0 23 13245.0 24 18929.0 25 26477.0 26 36314.0 27 46165.0 28 60897.0 29 79953.0 30 103906.0 31 138567.0 32 194651.0 33 269743.0 34 553792.0 35 1043915.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.41479739597894 17.2062263684094 11.719165590453708 25.65981064515796 2 16.659489846648054 19.151439825614748 37.64170713985238 26.547363187884816 3 19.28155240300923 22.892223299812457 28.019708683507666 29.80651561367064 4 12.689080001254476 15.21126857525757 35.67803371332278 36.42161771016517 5 14.8563003700418 36.46084263028451 33.54821235724623 15.134644642427455 6 35.03439640686987 35.02911554337981 16.398573554583656 13.53791449516667 7 30.83618004188997 30.077474626552547 20.08498205070976 19.001363280847723 8 28.119894993106865 33.45075208105301 18.916324881250866 19.513028044589262 9 26.854634854584315 14.629440598157405 18.35735678015617 40.15856776710211 10 15.623325852041987 27.102940450018632 31.6198610478735 25.653872650065885 11 37.24260663665013 21.55281788982727 21.85256203309785 19.352013440424752 12 24.26923213896623 23.60751735565293 28.838970099146167 23.28428040623467 13 29.13858621566399 19.74138670457017 25.301277711575988 25.818749368189852 14 23.247473637540786 19.520701355127272 25.33545085529152 31.896374152040423 15 24.97666957570986 27.46300160412224 22.113297978055424 25.44703084211248 16 25.520049621521036 26.391527584741382 23.51447485804646 24.57394793569112 17 23.966018443498598 26.368137868291797 25.08404641966081 24.581797268548797 18 24.508799495246496 25.852154390865433 25.707014787317455 23.932031326570616 19 25.275882080029156 25.33678514501131 25.359638149281793 24.027694625677743 20 25.31937062150093 25.029378192844966 25.062297079941604 24.5889541057125 21 26.09705515113145 24.707310332578754 24.830487648966848 24.36514686732295 22 25.462087077027913 24.667804928469433 25.20008268987087 24.670025304631782 23 24.35688204719949 24.767983036965024 25.517158232353776 25.35797668348171 24 24.437841193821438 25.183060939675823 25.428724318837233 24.950373547665507 25 24.645332520856712 24.929380369197133 25.43611928095819 24.989167828987963 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 217.0 1 217.0 2 482.0 3 747.0 4 747.0 5 747.0 6 1743.5 7 2740.0 8 2740.0 9 2740.0 10 3481.5 11 4223.0 12 4223.0 13 4223.0 14 5930.0 15 7637.0 16 7637.0 17 7637.0 18 12725.0 19 17813.0 20 17813.0 21 17813.0 22 27807.5 23 37802.0 24 37802.0 25 37802.0 26 55055.5 27 72309.0 28 72309.0 29 72309.0 30 91916.5 31 111524.0 32 111524.0 33 111524.0 34 137616.0 35 163708.0 36 163708.0 37 163708.0 38 190847.5 39 217987.0 40 217987.0 41 217987.0 42 249493.5 43 281000.0 44 281000.0 45 281000.0 46 310128.0 47 339256.0 48 339256.0 49 339256.0 50 347204.0 51 355152.0 52 355152.0 53 355152.0 54 333752.5 55 312353.0 56 312353.0 57 312353.0 58 285006.0 59 257659.0 60 257659.0 61 257659.0 62 223741.0 63 189823.0 64 189823.0 65 189823.0 66 154396.5 67 118970.0 68 118970.0 69 118970.0 70 90310.0 71 61650.0 72 61650.0 73 61650.0 74 46508.0 75 31366.0 76 31366.0 77 31366.0 78 24724.5 79 18083.0 80 18083.0 81 18083.0 82 12548.5 83 7014.0 84 7014.0 85 7014.0 86 5151.0 87 3288.0 88 3288.0 89 3288.0 90 2219.5 91 1151.0 92 1151.0 93 1151.0 94 734.0 95 317.0 96 317.0 97 317.0 98 717.0 99 1117.0 100 1117.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0010325418963435015 2 2.2945375474300032E-4 3 6.883612642290011E-4 4 0.010401903548349349 5 0.033538490484935214 6 0.06489717029981193 7 0.10803447619149599 8 0.11040549832384032 9 0.12053970582498952 10 0.133962750477455 11 0.14069339394991637 12 0.13419220423219802 13 0.12857058724099452 14 0.11656250740944417 15 0.13419220423219802 16 0.11992782914567483 17 0.12444041965562051 18 0.11235585523915582 19 0.09782378410543248 20 0.09269931691617213 21 0.09224040940668614 22 0.10463091216280816 23 0.08283280546222312 24 0.09132259438771413 25 0.08864563391571245 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 2614906.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 53.56913916759565 #Duplication Level Percentage of deduplicated Percentage of total 1 76.61458010938487 41.04177104146544 2 13.560401946816796 14.528381181151278 3 4.235273559994083 6.80639876244484 4 1.8393747088770978 3.94134879044772 5 0.9372719849519446 2.510442669988967 6 0.571322442113769 1.8363150846697862 7 0.38615316606894895 1.4480124885208638 8 0.28344377458579806 1.214707120558018 9 0.21237105982577428 1.0238881373079014 >10 1.20712882118033 11.90668309537111 >50 0.08837684093689091 3.269383968233376 >100 0.05476896478720846 5.860499698726843 >500 0.006809014626138466 2.451908411284407 >1k 0.002723605850445445 2.1602595498295885 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 4338 0.16589506467918924 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 3.824229245716672E-5 2 0.0 0.0 0.0 0.0 3.824229245716672E-5 3 0.0 0.0 0.0 0.0 3.824229245716672E-5 4 0.0 0.0 0.0 0.0 3.824229245716672E-5 5 0.0 3.824229245716672E-5 0.0 0.0 3.824229245716672E-5 6 0.0 3.824229245716672E-5 0.0 0.0 7.648458491433343E-5 7 0.0 3.824229245716672E-5 0.0 0.0 7.648458491433343E-5 8 0.0 3.824229245716672E-5 0.0 0.0 7.648458491433343E-5 9 0.0 3.824229245716672E-5 0.0 0.0 7.648458491433343E-5 10 0.0 3.824229245716672E-5 0.0 0.0 7.648458491433343E-5 11 0.0 3.824229245716672E-5 0.0 0.0 7.648458491433343E-5 12 0.0 3.824229245716672E-5 0.0 0.0 7.648458491433343E-5 13 0.0 3.824229245716672E-5 0.0 3.824229245716672E-5 7.648458491433343E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTCGTA 390 0.0 14.130883 10 GGTATCA 850 0.0 14.0753145 1 GTATCAA 2505 0.0 13.342629 1 CCGTCGT 415 0.0 13.279371 9 GTCGTAG 440 0.0 12.525341 11 ACCGTCG 465 0.0 12.260154 8 CGCGTAA 180 0.0 12.141191 10 TCGAACG 90 7.4835825E-6 11.608643 3 CGACCAT 355 0.0 11.509224 10 CGCATCG 325 0.0 11.401505 13 GCGTAAC 185 0.0 11.299656 11 CGCAAGA 405 0.0 11.255356 2 GTCCTAC 400 0.0 11.156921 1 AGCGACG 60 0.0058700214 11.085222 8 CGAGCCG 395 0.0 11.0641165 15 AAGACGG 430 0.0 11.046912 5 TACCGTC 500 0.0 11.021878 7 CTTATAC 185 5.456968E-12 10.781489 3 CCTATTC 370 0.0 10.781489 3 CAAGACG 450 0.0 10.765408 4 >>END_MODULE