##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062235_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3115090 Sequences flagged as poor quality 0 Sequence length 50 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.24244211242693 32.0 32.0 32.0 32.0 32.0 2 31.475043417686166 32.0 32.0 32.0 32.0 32.0 3 31.581239386341966 32.0 32.0 32.0 32.0 32.0 4 31.628472050566756 32.0 32.0 32.0 32.0 32.0 5 31.63856646196418 32.0 32.0 32.0 32.0 32.0 6 35.245393552032205 36.0 36.0 36.0 36.0 36.0 7 35.25428928217162 36.0 36.0 36.0 36.0 36.0 8 35.20013482756517 36.0 36.0 36.0 36.0 36.0 9 35.31388980735709 36.0 36.0 36.0 36.0 36.0 10 35.187413846790946 36.0 36.0 36.0 36.0 36.0 11 35.308052736839066 36.0 36.0 36.0 36.0 36.0 12 35.233166938996945 36.0 36.0 36.0 36.0 36.0 13 35.26004256698843 36.0 36.0 36.0 36.0 36.0 14 35.20147154656848 36.0 36.0 36.0 36.0 36.0 15 35.17705234840727 36.0 36.0 36.0 36.0 36.0 16 35.21507500585858 36.0 36.0 36.0 36.0 36.0 17 35.19938589254243 36.0 36.0 36.0 36.0 36.0 18 35.183309952521434 36.0 36.0 36.0 36.0 36.0 19 35.186339720521715 36.0 36.0 36.0 36.0 36.0 20 35.18068627230674 36.0 36.0 36.0 36.0 36.0 21 35.17684753891541 36.0 36.0 36.0 36.0 36.0 22 35.16295066916204 36.0 36.0 36.0 36.0 36.0 23 35.107744559547235 36.0 36.0 36.0 36.0 36.0 24 35.11821456201908 36.0 36.0 36.0 36.0 36.0 25 35.09491186450472 36.0 36.0 36.0 36.0 36.0 26 35.06060210138391 36.0 36.0 36.0 36.0 36.0 27 35.04791450648296 36.0 36.0 36.0 36.0 36.0 28 35.02152522078014 36.0 36.0 36.0 36.0 36.0 29 34.98291863156442 36.0 36.0 36.0 36.0 36.0 30 34.98866934823713 36.0 36.0 36.0 36.0 36.0 31 34.98143938056364 36.0 36.0 36.0 36.0 36.0 32 34.92328311541561 36.0 36.0 36.0 32.0 36.0 33 34.88936531528784 36.0 36.0 36.0 32.0 36.0 34 34.87266050098071 36.0 36.0 36.0 32.0 36.0 35 34.85718390158872 36.0 36.0 36.0 32.0 36.0 36 34.84070187378214 36.0 36.0 36.0 32.0 36.0 37 34.84578712011531 36.0 36.0 36.0 32.0 36.0 38 34.83678609606785 36.0 36.0 36.0 32.0 36.0 39 34.83564905026821 36.0 36.0 36.0 32.0 36.0 40 34.83530042470683 36.0 36.0 36.0 32.0 36.0 41 34.82296659165546 36.0 36.0 36.0 32.0 36.0 42 34.79129559659592 36.0 36.0 36.0 32.0 36.0 43 34.80267793225878 36.0 36.0 36.0 32.0 36.0 44 34.748814319971494 36.0 36.0 36.0 32.0 36.0 45 34.734599963403944 36.0 36.0 36.0 32.0 36.0 46 34.71555300167893 36.0 36.0 36.0 32.0 36.0 47 34.699592949160376 36.0 36.0 36.0 32.0 36.0 48 34.670258644212524 36.0 36.0 36.0 32.0 36.0 49 34.6581058653201 36.0 36.0 36.0 32.0 36.0 50 34.248035530273604 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 1.0 18 3.0 19 16.0 20 28.0 21 97.0 22 314.0 23 734.0 24 1772.0 25 3966.0 26 8078.0 27 14717.0 28 25618.0 29 39465.0 30 58401.0 31 84335.0 32 126694.0 33 213844.0 34 496310.0 35 2040697.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.331609445471145 17.428136996902783 11.764643546980896 26.475610010645184 2 16.57385612857743 19.61509469821005 36.28596689254523 27.525082280667284 3 18.766381997771486 23.175191913147682 27.96094226763285 30.09748382144798 4 12.610903697806483 15.608184675242128 34.72387635670238 37.05703527024901 5 15.070200264005381 36.320579065503125 32.544152845762305 16.06506782472919 6 35.82360165979367 34.45734724498778 16.0837935132449 13.635257581973658 7 31.38586686098957 29.70880456102392 19.832364393966145 19.072964184020368 8 28.927350413631707 32.294572548465695 18.666812194832254 20.111264843070344 9 27.410765018025163 13.906757108141338 18.14718033828878 40.535297535544714 10 16.56289756087226 26.169268357982713 30.21550909139354 27.052324989751497 11 38.13835234294996 20.81699084135611 21.54101486634415 19.503641949349777 12 25.151632858119672 23.112943767274782 27.839645082485575 23.89577829211997 13 29.470159770664733 18.8921026358789 25.016163256920347 26.621574336536025 14 24.226555252015192 19.055693414957513 24.336824939247343 32.38092639377996 15 25.637782535978094 26.576021880587717 21.60078842023826 26.18540716319593 16 26.643093092611082 25.23888708760959 22.842504341796495 25.27551547798284 17 24.704390563354508 25.49149462776356 24.3792314186749 25.424883390207025 18 25.56987227310724 24.44970986336163 25.281437033479676 24.698980830051454 19 26.181394438041917 24.561280733461956 24.606897393012723 24.650427435483405 20 26.350277023116238 23.833072826630943 24.083948967009867 25.732701183242952 21 27.42167963044406 23.783421987807735 23.89298543541278 24.90191294633542 22 26.709790086321743 23.59135691103628 24.44102738604663 25.257825616595348 23 24.907731368188838 23.602535914704205 25.259021491841803 26.230711225265154 24 25.371805687708903 24.348007812349522 24.76613672638928 25.514049773552294 25 25.505676085451224 23.75760291767132 24.789034784582263 25.947686212295196 26 25.15925775165678 24.948733193026428 25.081763655204558 24.81024540011223 27 25.902899319310347 24.19591046895806 24.388971569232982 25.512218642498606 28 25.310333890630982 23.92874294710295 25.202405625367575 25.558517536898496 29 25.011299899328172 24.382678795225278 25.181215715078174 25.424805590368376 30 25.151650564227417 24.41487408252051 25.25315756763281 25.18031778561926 31 25.66940538888593 24.320675116321326 24.165430207526104 25.844489287266644 32 25.798241770235936 24.12774693304955 23.99776569670296 26.076245600011553 33 25.15247597092981 23.998798105089403 24.729533517748013 26.119192406232777 34 25.934598265520194 24.127824388333433 24.89801945712034 25.03955788902604 35 26.467112733184145 23.683878525149105 25.07626607462214 24.77274266704461 36 24.950530965496874 24.633877781630005 24.538053597339392 25.87753765553373 37 26.19891147255536 24.33254340081039 24.406282563850027 25.062262562784227 38 25.33734177824718 23.997605205628087 24.822942515304533 25.842110500820205 39 26.189413764853626 24.003551772933076 24.142971059342603 25.664063402870696 40 26.348028161011232 24.137817017630645 24.6350101939368 24.879144627421322 41 24.88362171221907 24.8861898835238 24.97973552329861 25.25045288095852 42 26.52362416430572 24.534972752152942 24.471664646821353 24.469738436719986 43 25.883630645776947 23.61991049005108 24.712412129718476 25.784046734453497 44 25.204576871786085 24.491374865728872 24.391341671145046 25.91270659134 45 25.519804046201948 24.616567469871782 24.46257166888174 25.401056815044527 46 25.228089008966897 24.57155863283994 24.41014673458722 25.790205623605942 47 25.50847974523847 24.26073892400492 24.928878002741513 25.3019033280151 48 26.458435327523745 24.891836665901543 23.55169319719483 25.098034809379882 49 25.363284486624803 25.117568859926365 23.901189829928445 25.617956823520384 50 25.604711335970006 24.933484000205457 24.095356720940984 25.366447942883557 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 196.0 1 145.0 2 94.0 3 257.0 4 420.0 5 443.0 6 466.0 7 377.5 8 289.0 9 408.0 10 527.0 11 907.5 12 1288.0 13 2342.5 14 3397.0 15 4444.0 16 5491.0 17 5376.0 18 5261.0 19 5389.5 20 5518.0 21 6221.0 22 6924.0 23 8103.0 24 9282.0 25 12064.0 26 14846.0 27 18957.5 28 23069.0 29 26630.5 30 30192.0 31 33959.5 32 37727.0 33 43189.0 34 48651.0 35 57423.5 36 66196.0 37 81759.0 38 97322.0 39 109206.0 40 121090.0 41 133866.0 42 146642.0 43 152818.5 44 158995.0 45 176618.5 46 194242.0 47 209299.5 48 224357.0 49 237117.5 50 249878.0 51 242853.0 52 235828.0 53 237281.5 54 238735.0 55 244125.5 56 249516.0 57 244911.0 58 240306.0 59 220666.0 60 201026.0 61 176291.0 62 151556.0 63 130385.5 64 109215.0 65 91584.0 66 73953.0 67 63794.0 68 53635.0 69 47951.5 70 42268.0 71 32649.5 72 23031.0 73 20423.0 74 17815.0 75 12957.0 76 8099.0 77 7354.0 78 6609.0 79 5641.0 80 4673.0 81 3653.0 82 2633.0 83 2299.5 84 1966.0 85 1581.0 86 1196.0 87 778.5 88 361.0 89 243.5 90 126.0 91 87.5 92 49.0 93 44.5 94 40.0 95 43.5 96 47.0 97 38.0 98 29.0 99 23.5 100 18.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.03226231023822747 2 0.004558455774953533 3 2.889162110886042E-4 4 0.0 5 6.420360246413427E-5 6 1.2840720492826853E-4 7 0.0 8 0.0 9 0.0 10 3.210180123206713E-5 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 6.420360246413426E-4 17 0.0 18 1.926108073924028E-4 19 0.0 20 2.2471260862446993E-4 21 0.0 22 0.0 23 3.210180123206713E-5 24 7.062396271054769E-4 25 9.63054036962014E-5 26 4.4942521724893985E-4 27 4.4942521724893985E-4 28 0.0018619044714598936 29 5.778324221772084E-4 30 0.0010914612418902825 31 3.852216147848056E-4 32 8.025450308016784E-4 33 2.889162110886042E-4 34 0.0011235630431223496 35 2.889162110886042E-4 36 3.210180123206713E-4 37 0.0017977008689957594 38 0.0 39 8.346468320337454E-4 40 9.63054036962014E-5 41 0.0010593594406582154 42 0.005296797203291077 43 0.0041411323589366595 44 0.003980623352776324 45 0.002247126086244699 46 0.002503940496101236 47 6.420360246413426E-4 48 0.004012725154008391 49 0.003434892731831183 50 0.0016050900616033567 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 3115090.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 36.037441259008055 #Duplication Level Percentage of deduplicated Percentage of total 1 63.191965224814574 22.772767348305354 2 17.02587316902075 12.271378084238133 3 7.453959854723023 8.058649212347555 4 3.8716658259451266 5.5809971910802565 5 2.254116902172103 4.061630272648219 6 1.4118400291199216 3.0527461269915244 7 0.9335291605270808 2.3549401600246043 8 0.6740180772797149 1.943190949398182 9 0.4780133416049737 1.5503739947200252 >10 2.404276596044058 15.321099552263433 >50 0.15815934227077552 3.9493885029000664 >100 0.11664145280414785 8.474576816983777 >500 0.015259425690442918 3.7524285846984218 >1k 0.010681597983238407 6.855833203400459 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 4715 0.15135999280919654 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 4294 0.13784513449049626 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 4127 0.13248413368474105 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 3946 0.12667370766173688 No Hit TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCGGCGGCGTTATT 3872 0.12429817437056394 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC 3868 0.12416976716563566 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCG 3623 0.11630482586377923 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGA 3302 0.10600014766828567 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 3273 0.10506919543255572 No Hit GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTA 3264 0.10478027922146713 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGATTAATGAAAAC 3176 0.10195532071304522 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 9.63054036962014E-5 2 0.0 0.0 0.0 0.0 9.63054036962014E-5 3 0.0 0.0 0.0 0.0 9.63054036962014E-5 4 0.0 0.0 0.0 0.0 9.63054036962014E-5 5 0.0 0.0 0.0 0.0 9.63054036962014E-5 6 0.0 0.0 0.0 0.0 9.63054036962014E-5 7 0.0 0.0 0.0 0.0 9.63054036962014E-5 8 0.0 0.0 0.0 0.0 9.63054036962014E-5 9 0.0 0.0 0.0 3.210180123206713E-5 1.2840720492826853E-4 10 0.0 0.0 0.0 3.210180123206713E-5 1.2840720492826853E-4 11 0.0 0.0 0.0 3.210180123206713E-5 1.2840720492826853E-4 12 0.0 0.0 0.0 3.210180123206713E-5 2.2471260862446993E-4 13 0.0 0.0 0.0 3.210180123206713E-5 2.889162110886042E-4 14 0.0 0.0 0.0 3.210180123206713E-5 3.210180123206713E-4 15 0.0 0.0 0.0 3.210180123206713E-5 3.852216147848056E-4 16 0.0 0.0 0.0 1.6050900616033565E-4 4.173234160168727E-4 17 0.0 0.0 0.0 2.2471260862446993E-4 4.4942521724893985E-4 18 0.0 0.0 0.0 3.210180123206713E-4 5.457306209451412E-4 19 0.0 0.0 0.0 4.8152701848100697E-4 5.457306209451412E-4 20 0.0 0.0 0.0 8.988504344978797E-4 5.457306209451412E-4 21 0.0 0.0 0.0 0.0010914612418902825 5.457306209451412E-4 22 0.0 0.0 0.0 0.0013482756517468196 6.099342234092755E-4 23 0.0 0.0 0.0 0.0017655990677636923 6.741378258734098E-4 24 0.0 0.0 0.0 0.0023755332911729677 7.062396271054769E-4 25 0.0 0.0 0.0 0.003113874719510512 7.062396271054769E-4 26 0.0 0.0 0.0 0.0037880125453839215 7.062396271054769E-4 27 0.0 0.0 0.0 0.004397946768793197 7.062396271054769E-4 28 0.0 0.0 0.0 0.005361000805755211 7.062396271054769E-4 29 0.0 0.0 0.0 0.006580869252573762 7.38341428337544E-4 30 0.0 0.0 0.0 0.008218061115409186 7.38341428337544E-4 31 0.0 0.0 0.0 0.012230786269417577 7.38341428337544E-4 32 0.0 0.0 0.0 0.016853445646835243 9.309522357299468E-4 33 0.0 0.0 0.0 0.021989733843965985 9.309522357299468E-4 34 0.0 0.0 0.0 0.027543345457113597 9.951558381940812E-4 35 0.0 0.0 0.0 0.03277593905794054 9.951558381940812E-4 36 0.0 0.0 0.0 0.03993464073269151 0.0010272576394261483 37 0.0 0.0 0.0 0.05168389998362808 0.0010272576394261483 38 0.0 0.0 0.0 0.06648283035161102 0.0011235630431223496 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 4090 0.0 28.515516 1 GGTATCA 1900 0.0 21.657917 1 ACCGTCG 980 0.0 19.53005 8 TCAACGC 6055 0.0 19.111235 4 CGTCGTA 1080 0.0 18.943897 10 ATACCGT 1080 0.0 18.7402 6 ATCAACG 6225 0.0 18.660301 3 AACGCAG 6245 0.0 18.599945 6 CAACGCA 6240 0.0 18.579891 5 TACCGTC 1085 0.0 18.248322 7 TATCAAC 6590 0.0 17.894125 2 CGCAATA 1055 0.0 17.516928 36 GGCGTTA 1140 0.0 17.176598 42 CCGTCGT 1115 0.0 17.165424 9 AACGTAC 80 0.0019886147 16.500849 43 ATACGAA 1110 0.0 16.451824 40 CTAGCGG 1120 0.0 16.3031 29 TAATACT 635 0.0 16.283257 4 GTCGTAG 1180 0.0 16.219872 11 TACGAAT 1155 0.0 16.001337 41 >>END_MODULE