##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062234_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1641125 Sequences flagged as poor quality 0 Sequence length 25 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.25628760758626 32.0 32.0 32.0 32.0 32.0 2 30.78198370020565 32.0 32.0 32.0 32.0 32.0 3 30.809041968162084 32.0 32.0 32.0 32.0 32.0 4 30.813948358595475 32.0 32.0 32.0 32.0 32.0 5 30.737974255465 32.0 32.0 32.0 32.0 32.0 6 34.403370858405054 36.0 36.0 36.0 32.0 36.0 7 34.32772945388072 36.0 36.0 36.0 32.0 36.0 8 34.29030695407114 36.0 36.0 36.0 32.0 36.0 9 34.42040977987661 36.0 36.0 36.0 32.0 36.0 10 34.10014654581461 36.0 36.0 36.0 32.0 36.0 11 34.40793845685125 36.0 36.0 36.0 32.0 36.0 12 34.22211348922233 36.0 36.0 36.0 32.0 36.0 13 34.31347155152715 36.0 36.0 36.0 32.0 36.0 14 34.216653819788256 36.0 36.0 36.0 32.0 36.0 15 34.17036118516262 36.0 36.0 36.0 32.0 36.0 16 34.16602452585879 36.0 36.0 36.0 32.0 36.0 17 34.100086830680176 36.0 36.0 36.0 32.0 36.0 18 34.10399451595704 36.0 36.0 36.0 32.0 36.0 19 34.11617518470561 36.0 36.0 36.0 32.0 36.0 20 34.10556234290502 36.0 36.0 36.0 32.0 36.0 21 34.090951024449694 36.0 36.0 36.0 32.0 36.0 22 34.04720420443294 36.0 36.0 36.0 32.0 36.0 23 34.02493228730292 36.0 36.0 36.0 32.0 36.0 24 33.99589549851474 36.0 36.0 36.0 32.0 36.0 25 33.6367851321502 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 3 2.0 4 20.0 5 129.0 6 309.0 7 90.0 8 274.0 9 219.0 10 126.0 11 42.0 12 73.0 13 77.0 14 287.0 15 412.0 16 623.0 17 839.0 18 1069.0 19 1499.0 20 2204.0 21 3158.0 22 4669.0 23 7182.0 24 9996.0 25 13970.0 26 19219.0 27 24381.0 28 32423.0 29 42616.0 30 56261.0 31 76504.0 32 108741.0 33 155139.0 34 341370.0 35 737202.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.662739229201804 17.722033460402265 12.06236777193889 25.55285953845704 2 16.69067466120698 19.443733547821 37.415179877157065 26.450411913814953 3 18.99531720811765 22.799864726116088 28.464854687209613 29.73996337855665 4 12.99387309120648 15.638974306472194 35.12631036260526 36.24084223971607 5 15.15319414018547 36.23703064370431 33.17302593322678 15.436749282883437 6 34.803323207946825 34.80801803790252 16.472877906374116 13.91578084777654 7 30.616956670786056 30.363571595008427 20.00894228505272 19.010529449152802 8 28.216848184798348 33.1276588736075 19.06245386812353 19.593039073470617 9 26.95106461637573 14.706176617361585 18.755879456948648 39.586879309314035 10 16.699360143407926 26.741758955826285 30.745148908363284 25.813731992402506 11 36.81364445982137 21.521778793143113 21.945742635397806 19.718834111637708 12 24.22932835456631 23.95366573924928 28.436447503294772 23.380558402889637 13 29.30075660004039 19.591676362365114 25.14638115046402 25.961185887130476 14 23.398384597552493 19.777455131098936 25.077841900416054 31.74631837093252 15 25.073048882500053 27.288158240749837 22.10624837169175 25.532544505058357 16 25.646179900583952 26.093356889941994 23.550853723709288 24.709609485764762 17 24.02135524415711 26.328190154649207 25.026035168678 24.624419432515683 18 24.58717185729048 25.518726872778778 25.81202243393835 24.082078835992395 19 25.378536283674862 25.30034357218706 25.287169137178196 24.03395100695988 20 25.602710359317776 24.72080676492024 24.92390074620266 24.752582129559322 21 26.440700294086433 24.44229087356235 24.637271034010837 24.47973779834038 22 25.775865802252042 24.431485137765318 25.094861758923958 24.697787301058682 23 24.459183468116937 24.552915039678886 25.51450217070611 25.473399321498068 24 24.514888779378687 25.116734080496506 25.35160500212244 25.01677213800237 25 24.79561623116635 24.75225424395539 25.316204026992988 25.135925497885264 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 423.0 1 423.0 2 514.0 3 605.0 4 605.0 5 605.0 6 1207.5 7 1810.0 8 1810.0 9 1810.0 10 2302.0 11 2794.0 12 2794.0 13 2794.0 14 3825.5 15 4857.0 16 4857.0 17 4857.0 18 8119.0 19 11381.0 20 11381.0 21 11381.0 22 17704.5 23 24028.0 24 24028.0 25 24028.0 26 34652.5 27 45277.0 28 45277.0 29 45277.0 30 56894.5 31 68512.0 32 68512.0 33 68512.0 34 84579.0 35 100646.0 36 100646.0 37 100646.0 38 117816.5 39 134987.0 40 134987.0 41 134987.0 42 154182.5 43 173378.0 44 173378.0 45 173378.0 46 192085.5 47 210793.0 48 210793.0 49 210793.0 50 216717.0 51 222641.0 52 222641.0 53 222641.0 54 209055.0 55 195469.0 56 195469.0 57 195469.0 58 179549.0 59 163629.0 60 163629.0 61 163629.0 62 142929.5 63 122230.0 64 122230.0 65 122230.0 66 99762.0 67 77294.0 68 77294.0 69 77294.0 70 58690.0 71 40086.0 72 40086.0 73 40086.0 74 30082.5 75 20079.0 76 20079.0 77 20079.0 78 15913.5 79 11748.0 80 11748.0 81 11748.0 82 8172.5 83 4597.0 84 4597.0 85 4597.0 86 3424.5 87 2252.0 88 2252.0 89 2252.0 90 1503.5 91 755.0 92 755.0 93 755.0 94 486.0 95 217.0 96 217.0 97 217.0 98 427.0 99 637.0 100 637.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0012796100236118517 2 3.046690532409171E-4 3 6.093381064818342E-4 4 0.01017594637824663 5 0.032112118211592655 6 0.06233528829309163 7 0.10498895574682002 8 0.1098636605986747 9 0.11839439408942037 10 0.1318607662426689 11 0.14051336735471093 12 0.13192170005331708 13 0.12686419376951788 14 0.11607890928478941 15 0.13125142813618706 16 0.11900373219590221 17 0.12162388605377408 18 0.11108233681163837 19 0.09664102368801888 20 0.09079137786579328 21 0.0896336354634778 22 0.09956584659913169 23 0.08140757102597304 24 0.0914616497829233 25 0.08774468733338411 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 1641125.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 55.4092971038736 #Duplication Level Percentage of deduplicated Percentage of total 1 78.40335171307554 43.442746090092996 2 12.754110649678488 14.133926125674273 3 3.7772275632894305 6.278805728497337 4 1.6001294820182317 3.546481994952623 5 0.8404118722134842 2.3283315558549798 6 0.5561447122467824 1.848935255617815 7 0.35182656117959427 1.3646123720204009 8 0.2816300584123808 1.2483938863962307 9 0.2012834760936269 1.003767833607499 >10 1.08595694612904 10.801405345763717 >50 0.07640968510940489 2.9169791526639144 >100 0.06322728245525104 7.11125681135481 >500 0.006300398555031094 2.4023024750428648 >1k 0.00198959954369403 1.572055372460745 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 3127 0.19054002589686952 No Hit TATCAACGCAGAGTACTTTTTTTTT 2247 0.13691827252646813 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.2186762129636682E-4 2 0.0 0.0 0.0 0.0 1.2186762129636682E-4 3 0.0 0.0 0.0 0.0 1.2186762129636682E-4 4 0.0 0.0 0.0 0.0 1.2186762129636682E-4 5 0.0 0.0 0.0 0.0 1.2186762129636682E-4 6 0.0 0.0 0.0 0.0 1.2186762129636682E-4 7 0.0 0.0 0.0 0.0 1.2186762129636682E-4 8 0.0 0.0 0.0 0.0 1.2186762129636682E-4 9 0.0 0.0 0.0 1.2186762129636682E-4 1.2186762129636682E-4 10 0.0 0.0 0.0 1.2186762129636682E-4 1.2186762129636682E-4 11 0.0 0.0 0.0 1.8280143194455024E-4 1.2186762129636682E-4 12 0.0 0.0 0.0 1.8280143194455024E-4 3.046690532409171E-4 13 0.0 0.0 0.0 3.046690532409171E-4 3.656028638891005E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 710 0.0 14.311822 1 TCGCGTA 120 3.6379788E-12 14.251464 9 CGACTTA 40 0.005276736 14.25103 12 GTATCAA 2000 0.0 12.867933 1 CGCGTAA 135 3.7107384E-10 11.964193 10 GCGTAAC 135 3.7107384E-10 11.963827 11 CGCAATA 105 2.7250098E-7 11.760243 2 AAGACGG 285 0.0 11.666798 5 ATCGCCA 270 0.0 11.611242 16 CGCATCG 255 0.0 11.549501 13 CAAGACG 295 0.0 11.271314 4 TAGGACG 170 1.0913936E-11 11.176596 4 GCACCGT 60 0.0058740657 11.0837965 6 CGGTTCT 270 0.0 10.9081955 12 ACGGTAT 245 0.0 10.858258 9 CGGACAT 175 2.0008883E-11 10.857265 5 CGCCAGT 280 0.0 10.857265 18 CATCGCC 290 0.0 10.810797 15 GGGTAGG 440 0.0 10.791625 1 GCATCGC 265 0.0 10.755165 14 >>END_MODULE