##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062232_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1109682 Sequences flagged as poor quality 0 Sequence length 25 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.33628372813112 32.0 32.0 32.0 32.0 32.0 2 30.952544062172766 32.0 32.0 32.0 32.0 32.0 3 30.974131327713707 32.0 32.0 32.0 32.0 32.0 4 30.973468074637598 32.0 32.0 32.0 32.0 32.0 5 30.92065654845262 32.0 32.0 32.0 32.0 32.0 6 34.5851505205996 36.0 36.0 36.0 32.0 36.0 7 34.52912275769094 36.0 36.0 36.0 32.0 36.0 8 34.481955190766364 36.0 36.0 36.0 32.0 36.0 9 34.59476408556686 36.0 36.0 36.0 32.0 36.0 10 34.34377506348665 36.0 36.0 36.0 32.0 36.0 11 34.57634619647791 36.0 36.0 36.0 32.0 36.0 12 34.43353501273338 36.0 36.0 36.0 32.0 36.0 13 34.504016465978545 36.0 36.0 36.0 32.0 36.0 14 34.4132481197316 36.0 36.0 36.0 32.0 36.0 15 34.383228708765216 36.0 36.0 36.0 32.0 36.0 16 34.377725330319855 36.0 36.0 36.0 32.0 36.0 17 34.323973895224036 36.0 36.0 36.0 32.0 36.0 18 34.32692879581718 36.0 36.0 36.0 32.0 36.0 19 34.32986387091076 36.0 36.0 36.0 32.0 36.0 20 34.31120807582713 36.0 36.0 36.0 32.0 36.0 21 34.29916228252779 36.0 36.0 36.0 32.0 36.0 22 34.269451067963615 36.0 36.0 36.0 32.0 36.0 23 34.243847336444134 36.0 36.0 36.0 32.0 36.0 24 34.216325037262926 36.0 36.0 36.0 32.0 36.0 25 33.89159777305571 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 3 1.0 4 16.0 5 90.0 6 233.0 7 49.0 8 188.0 9 153.0 10 85.0 11 23.0 12 46.0 13 43.0 14 146.0 15 244.0 16 348.0 17 527.0 18 684.0 19 875.0 20 1241.0 21 1806.0 22 2613.0 23 3933.0 24 5402.0 25 7793.0 26 10786.0 27 14121.0 28 18819.0 29 25455.0 30 33520.0 31 46196.0 32 66744.0 33 97439.0 34 224291.0 35 545772.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.43762796666378 17.25792672376503 11.74833102632869 25.556114283242493 2 17.229232263773817 19.06246676963948 36.91088766290762 26.797413303679086 3 19.89324783066723 22.069474520872365 27.746822712636966 30.290454935823437 4 13.395465958639535 14.93382073286576 34.43385768438357 37.236855624111136 5 15.673820113909468 35.56263307917952 32.65278526496842 16.11076154194259 6 35.601158529547554 34.11088628231764 16.103001644736842 14.184953543397969 7 31.58475417230492 29.623184483536306 19.262877762742445 19.52918358141633 8 28.533203424540133 32.65311645782024 18.58967766380687 20.22400245383276 9 26.72795842506045 14.891461258074996 18.669114728066695 39.711465588797864 10 17.04922500241383 26.212667964269894 30.04204126161684 26.696065771699434 11 37.52895599591029 21.343467969502242 21.25097121591269 19.876604818674778 12 25.063030480222775 23.44282679747409 27.7057988041805 23.78834391812264 13 29.40465781877799 19.301318160368208 24.88091983394193 26.413104186911873 14 23.707708144810667 19.583922396176828 24.40502021383996 32.30334924517254 15 25.47512871923236 27.045115346508748 21.646848206051832 25.83290772820706 16 26.143534332645835 25.863932541895156 23.034351592710685 24.958181532748323 17 24.28445626616188 26.129684801654403 24.538986103266392 25.046872828917333 18 25.033403071548882 24.966551819644163 25.56108589528802 24.438959213518928 19 25.605580341437808 24.993730865609603 25.019709436896427 24.380979356056166 20 26.06833636551414 24.1209456796159 24.652396625484933 25.158321329385036 21 26.74589666366307 24.01956937630731 24.436013930192093 24.798520029837526 22 26.212566653165386 24.092023991982224 24.80918543990864 24.88622391494375 23 24.658407724539988 24.252104569174353 25.321029096897668 25.768458609387995 24 24.788073293536755 24.86104571555368 25.243136172492736 25.107744818416833 25 24.972016599725983 24.28039141583829 25.05544817185641 25.692143812579317 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 110.0 1 110.0 2 225.0 3 340.0 4 340.0 5 340.0 6 708.5 7 1077.0 8 1077.0 9 1077.0 10 1333.5 11 1590.0 12 1590.0 13 1590.0 14 2170.5 15 2751.0 16 2751.0 17 2751.0 18 4481.0 19 6211.0 20 6211.0 21 6211.0 22 9920.0 23 13629.0 24 13629.0 25 13629.0 26 19930.0 27 26231.0 28 26231.0 29 26231.0 30 33662.5 31 41094.0 32 41094.0 33 41094.0 34 51745.0 35 62396.0 36 62396.0 37 62396.0 38 74108.0 39 85820.0 40 85820.0 41 85820.0 42 99767.0 43 113714.0 44 113714.0 45 113714.0 46 127465.0 47 141216.0 48 141216.0 49 141216.0 50 147716.5 51 154217.0 52 154217.0 53 154217.0 54 145068.5 55 135920.0 56 135920.0 57 135920.0 58 125866.0 59 115812.0 60 115812.0 61 115812.0 62 102920.0 63 90028.0 64 90028.0 65 90028.0 66 73780.5 67 57533.0 68 57533.0 69 57533.0 70 43339.5 71 29146.0 72 29146.0 73 29146.0 74 22318.0 75 15490.0 76 15490.0 77 15490.0 78 12332.5 79 9175.0 80 9175.0 81 9175.0 82 6346.0 83 3517.0 84 3517.0 85 3517.0 86 2560.0 87 1603.0 88 1603.0 89 1603.0 90 1066.5 91 530.0 92 530.0 93 530.0 94 316.0 95 102.0 96 102.0 97 102.0 98 266.0 99 430.0 100 430.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.001622086327434346 2 3.604636283187436E-4 3 8.11043163717173E-4 4 0.010813908849562308 5 0.03424404469028064 6 0.06217997588498326 7 0.10651700216818873 8 0.1092204793805793 9 0.11913322915934475 10 0.13382212201333354 11 0.13832791736731787 12 0.13409246973457262 13 0.1257116903761618 14 0.115618708783237 15 0.13120876070802265 16 0.11895299734518539 17 0.12291809725669155 18 0.11273499975668703 19 0.09696471601774202 20 0.09182810931419993 21 0.09110718205756244 22 0.10318271360624034 23 0.08146478000003606 24 0.09408100699119207 25 0.08912463210180935 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 1109682.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 54.33590502597782 #Duplication Level Percentage of deduplicated Percentage of total 1 76.36684384676794 41.494615743916626 2 13.915742102238982 15.122488824665167 3 4.302990635577995 7.014206715073139 4 1.8665725966643758 4.056876453457934 5 0.9484937014216768 2.5768631839093206 6 0.5918182135079978 1.929418694508866 7 0.37543452019709966 1.4279702103032217 8 0.2751331899622726 1.1959688703427487 9 0.1978522912952134 0.9675434978089934 >10 1.0028232963633739 9.754511520571317 >50 0.07674853469254822 2.935645478219791 >100 0.07072700041672088 7.698689647775294 >500 0.006656657278344472 2.387642403971705 >1k 0.0021634136154619534 1.4375587554759388 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 2126 0.1915864184514122 No Hit GCGCAAGACGGACCAGAGCGAAAGC 1572 0.1416622059292662 No Hit TATCAACGCAGAGTACTTTTTTTTT 1279 0.11525824515491824 No Hit GGGTAGGCACACGCTGAGCCAGTCA 1254 0.11300534747792611 No Hit GAATAGGACCGCGGTTCTATTTTGT 1172 0.10561584309739186 No Hit GTGTAGCGCGCGTGCAGCCCCGGAC 1156 0.10417398858411689 No Hit TCGTAGTTCCGACCATAAACGATGC 1127 0.10156062727880599 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.8023181415937177E-4 2 0.0 0.0 0.0 0.0 1.8023181415937177E-4 3 0.0 0.0 0.0 0.0 1.8023181415937177E-4 4 0.0 0.0 0.0 0.0 1.8023181415937177E-4 5 0.0 0.0 0.0 0.0 1.8023181415937177E-4 6 0.0 0.0 0.0 0.0 3.6046362831874355E-4 7 0.0 0.0 0.0 9.011590707968589E-5 3.6046362831874355E-4 8 0.0 0.0 0.0 9.011590707968589E-5 3.6046362831874355E-4 9 0.0 0.0 0.0 9.011590707968589E-5 3.6046362831874355E-4 10 0.0 0.0 0.0 9.011590707968589E-5 3.6046362831874355E-4 11 0.0 0.0 0.0 9.011590707968589E-5 3.6046362831874355E-4 12 0.0 0.0 0.0 9.011590707968589E-5 4.5057953539842947E-4 13 0.0 0.0 0.0 9.011590707968589E-5 9.011590707968589E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 505 0.0 14.290479 1 GTATTAA 55 1.9669865E-4 13.81185 1 GTGTTAG 70 7.2924886E-6 13.56521 1 CGCAAGA 260 0.0 13.153158 2 CAAGACG 275 0.0 13.127772 4 AAGACGG 290 0.0 12.776348 5 GTATCAA 1460 0.0 12.74758 1 ACTCTAA 195 0.0 12.668292 10 CGGCGTC 75 1.4764133E-5 12.66772 14 AACCGCG 75 1.4764133E-5 12.66772 7 TCGGCGT 75 1.4764133E-5 12.66772 13 ATCGCCA 170 0.0 12.294585 16 GCAAGAC 295 0.0 12.237202 3 TCTATAC 55 0.003067654 12.090822 3 GCGCAAG 300 0.0 12.027819 1 GTATATG 95 1.0446347E-6 11.994501 1 GCGGTCG 80 2.8608627E-5 11.876523 9 TCGCCAG 185 0.0 11.80966 17 CGGTTCT 290 0.0 11.794617 12 GGTTCTA 290 0.0 11.794085 13 >>END_MODULE