##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062232_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1109682 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.310628630544606 32.0 32.0 32.0 32.0 32.0 2 31.502886412503763 32.0 32.0 32.0 32.0 32.0 3 31.604208232628807 32.0 32.0 32.0 32.0 32.0 4 31.674515762173307 32.0 32.0 32.0 32.0 32.0 5 31.657641558572635 32.0 32.0 32.0 32.0 32.0 6 35.309290409324475 36.0 36.0 36.0 36.0 36.0 7 35.31455858525235 36.0 36.0 36.0 36.0 36.0 8 35.267841597863175 36.0 36.0 36.0 36.0 36.0 9 35.34368945337493 36.0 36.0 36.0 36.0 36.0 10 35.23773297214878 36.0 36.0 36.0 36.0 36.0 11 35.345104273116085 36.0 36.0 36.0 36.0 36.0 12 35.27260872934769 36.0 36.0 36.0 36.0 36.0 13 35.29962007133575 36.0 36.0 36.0 36.0 36.0 14 35.26918973183308 36.0 36.0 36.0 36.0 36.0 15 35.25155765345387 36.0 36.0 36.0 36.0 36.0 16 35.2609315101083 36.0 36.0 36.0 36.0 36.0 17 35.23642629149612 36.0 36.0 36.0 36.0 36.0 18 35.236260478227095 36.0 36.0 36.0 36.0 36.0 19 35.22704702788727 36.0 36.0 36.0 36.0 36.0 20 35.220569496486384 36.0 36.0 36.0 36.0 36.0 21 35.214768735547665 36.0 36.0 36.0 36.0 36.0 22 35.202844598722876 36.0 36.0 36.0 36.0 36.0 23 35.17684706068946 36.0 36.0 36.0 36.0 36.0 24 35.16034503578503 36.0 36.0 36.0 36.0 36.0 25 35.14602832162728 36.0 36.0 36.0 36.0 36.0 26 35.10186792252195 36.0 36.0 36.0 36.0 36.0 27 35.0862057778715 36.0 36.0 36.0 36.0 36.0 28 35.07082209137393 36.0 36.0 36.0 36.0 36.0 29 35.05708572365777 36.0 36.0 36.0 36.0 36.0 30 35.03410977198873 36.0 36.0 36.0 36.0 36.0 31 35.04121270778475 36.0 36.0 36.0 36.0 36.0 32 35.00926121177058 36.0 36.0 36.0 36.0 36.0 33 34.997520911396236 36.0 36.0 36.0 36.0 36.0 34 34.982556263866584 36.0 36.0 36.0 36.0 36.0 35 34.96845312440861 36.0 36.0 36.0 36.0 36.0 36 34.95223947040684 36.0 36.0 36.0 36.0 36.0 37 34.93283571329444 36.0 36.0 36.0 36.0 36.0 38 34.91385369862717 36.0 36.0 36.0 36.0 36.0 39 34.90033360908801 36.0 36.0 36.0 36.0 36.0 40 34.892277246995086 36.0 36.0 36.0 36.0 36.0 41 34.86216862128069 36.0 36.0 36.0 32.0 36.0 42 34.83012881167758 36.0 36.0 36.0 32.0 36.0 43 34.82819131967537 36.0 36.0 36.0 32.0 36.0 44 34.77774894068751 36.0 36.0 36.0 32.0 36.0 45 34.762572520776224 36.0 36.0 36.0 32.0 36.0 46 34.745608201268475 36.0 36.0 36.0 32.0 36.0 47 34.72189329916138 36.0 36.0 36.0 32.0 36.0 48 34.69952202522885 36.0 36.0 36.0 32.0 36.0 49 34.679555043697206 36.0 36.0 36.0 32.0 36.0 50 34.279423294241056 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 1.0 20 15.0 21 19.0 22 72.0 23 213.0 24 501.0 25 1176.0 26 2466.0 27 4609.0 28 8017.0 29 12874.0 30 19430.0 31 28836.0 32 43460.0 33 73865.0 34 171675.0 35 742452.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.1020782363027 17.737396173823996 12.147144250549442 26.013381339323864 2 16.660944012616874 19.439179903120422 36.66463895460178 27.235237129660923 3 19.317821353903827 22.423401340927114 27.911019392978154 30.347757912190904 4 13.048603113324358 15.370709806953704 34.52070052501527 37.05998655470666 5 15.194200129767141 35.826814937639675 32.675365871242164 16.30361906135102 6 35.86964553809109 34.07733026218322 15.925012751400851 14.128011448324834 7 31.467303245434273 29.657865947181268 19.369242719986445 19.505588087398014 8 28.65721891496843 32.68485926598792 18.485836482884284 20.172085336159366 9 26.799659722334866 14.68096265416579 18.66165261759675 39.857725005902594 10 17.042014777219762 26.20428753849079 30.067109376478466 26.686588307810982 11 37.69034732472907 21.26978720029702 21.2299559693678 19.80990950560611 12 25.082050533396057 23.443382879059047 27.618452854060894 23.85611373348401 13 29.436361047579396 19.2044207259377 24.932908707179173 26.426309519303732 14 23.84358762239993 19.43764069345993 24.464846685807284 32.253924998332856 15 25.526502187113064 26.945737607711038 21.70387552469987 25.823884680476027 16 26.344384957343216 25.735736087543064 22.982127134979645 24.93775182013408 17 24.293446230541722 26.127845635055806 24.602543791825045 24.976164342577423 18 25.206839094909427 24.90368836393227 25.535672928837975 24.35379961232032 19 25.76305644319724 24.843874190984444 25.09791093304208 24.295158432776237 20 26.18822757592743 23.961635717748752 24.758984137740857 25.09115256858296 21 26.980792695565036 23.906398409634473 24.42546603441346 24.68734286038703 22 26.367193484259456 23.98957539186902 24.921373871072973 24.72185725279855 23 24.706807896316242 24.08753138286464 25.404124785298855 25.801535935520263 24 24.88498822621881 24.742603424985287 25.28609882766843 25.08630952112747 25 25.209947723715192 24.066285716345508 25.195258817624165 25.52850774231513 26 24.771420177745256 25.27111468371906 25.37889369709051 24.578571441445177 27 25.391059388399157 24.416181991532678 25.090071173799966 25.102687446268195 28 25.086309832246666 24.366272703924157 25.3573826334975 25.190034830331676 29 24.704283584967893 24.667786511041943 25.4971261933642 25.130803710625965 30 24.8260069876567 24.79816089633774 25.52513312504337 24.850698990962186 31 25.328721781203 24.583730220595722 24.77531750230022 25.312230495901062 32 25.170026953789254 24.545701136456824 24.69024770270989 25.59402420704403 33 24.756055799870232 24.307908586259103 25.193659433350156 25.74237618052051 34 25.540474049135153 24.54099131817092 25.16360660878781 24.75492802390612 35 25.726762916549887 24.188122532511596 25.519315911509704 24.56579863942881 36 24.615452548975785 24.897335360342296 24.97303279050466 25.514179300177258 37 25.712488521331174 24.54195718174912 24.89882099765065 24.84673329926906 38 24.98238234016592 24.3055217620904 25.2406545298563 25.471441367887376 39 25.803681258026 24.273052920900266 24.54169013449884 25.381575686574898 40 25.662036511360913 24.62444195724541 24.95471675669246 24.758804774701222 41 24.736835939365704 25.02061425524188 25.54121994937229 24.70132985602013 42 25.822844814378897 24.902174246097335 25.024738064897544 24.250242874626228 43 25.535331761050216 24.04430630141875 25.086356914275726 25.334005023255312 44 24.91341809933465 24.880704875351803 24.764180912239343 25.4416961130742 45 25.048731274619097 24.95410744040726 24.916798614346593 25.08036267062705 46 24.958365475426618 24.812194049327 24.85103491532511 25.378405559921273 47 25.072206086308462 24.593325409062686 25.309934205724037 25.02453429890481 48 25.792288268023512 25.112424457073235 24.2838629674289 24.811424307474354 49 25.002861296081512 25.1544423987304 24.456556513526493 25.3861397916616 50 25.246675768594745 25.29344706237524 24.509599830577972 24.950277338452043 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 31.0 1 34.0 2 37.0 3 97.5 4 158.0 5 166.0 6 174.0 7 134.0 8 94.0 9 154.5 10 215.0 11 400.0 12 585.0 13 994.0 14 1403.0 15 1832.0 16 2261.0 17 2323.0 18 2385.0 19 2287.0 20 2189.0 21 2501.5 22 2814.0 23 3322.5 24 3831.0 25 4784.5 26 5738.0 27 7187.5 28 8637.0 29 10249.5 30 11862.0 31 13809.0 32 15756.0 33 18238.0 34 20720.0 35 23896.5 36 27073.0 37 31934.5 38 36796.0 39 40846.0 40 44896.0 41 49093.5 42 53291.0 43 56544.5 44 59798.0 45 65604.5 46 71411.0 47 76638.5 48 81866.0 49 84826.5 50 87787.0 51 85756.0 52 83725.0 53 84243.0 54 84761.0 55 84954.5 56 85148.0 57 82190.5 58 79233.0 59 72834.5 60 66436.0 61 58743.5 62 51051.0 63 44135.5 64 37220.0 65 31679.0 66 26138.0 67 22338.5 68 18539.0 69 16205.0 70 13871.0 71 10786.5 72 7702.0 73 6752.5 74 5803.0 75 4290.0 76 2777.0 77 2441.5 78 2106.0 79 1763.0 80 1420.0 81 1157.5 82 895.0 83 707.5 84 520.0 85 424.5 86 329.0 87 218.5 88 108.0 89 73.0 90 38.0 91 28.0 92 18.0 93 14.5 94 11.0 95 11.5 96 12.0 97 10.5 98 9.0 99 6.5 100 4.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0338835810619619 2 0.005136606703542096 3 1.802318141593718E-4 4 0.0 5 1.802318141593718E-4 6 0.0 7 0.0 8 0.0 9 0.0 10 9.01159070796859E-5 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 9.912749778765448E-4 17 0.0 18 2.7034772123905767E-4 19 0.0 20 3.604636283187436E-4 21 0.0 22 0.0 23 0.0 24 0.0011715067920359166 25 9.01159070796859E-5 26 3.604636283187436E-4 27 3.604636283187436E-4 28 0.00153197042035466 29 3.604636283187436E-4 30 9.912749778765448E-4 31 4.505795353984294E-4 32 4.505795353984294E-4 33 1.802318141593718E-4 34 7.209272566374872E-4 35 9.01159070796859E-5 36 9.01159070796859E-5 37 0.0013517386061952885 38 0.0 39 6.308113495578012E-4 40 0.0 41 0.0011715067920359166 42 0.00504649079646241 43 0.0038749840044264936 44 0.00351452037610775 45 0.002252897676992147 46 0.002343013584071833 47 9.912749778765448E-4 48 0.004325563539824923 49 0.004055215818585865 50 0.0024331294911515188 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1109682.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 56.32639747299181 #Duplication Level Percentage of deduplicated Percentage of total 1 76.38713218995417 43.02611969553327 2 14.220875283838124 16.020213473026228 3 4.297889337999526 7.262538694412848 4 1.7920917123534779 4.03768280392306 5 0.9211560775462058 2.594270167926483 6 0.5415479649667669 1.8302067555244776 7 0.35584956042322774 1.4030606646691701 8 0.25496431766227357 1.1488977198460293 9 0.19003397743827047 0.9633536411905422 >10 0.9019337662005864 9.072545890526726 >50 0.06948610077450337 2.715750553020475 >100 0.059965978536865035 6.863274451579052 >500 0.005626832516115458 2.127658158963591 >1k 0.0014468997898582606 0.9344273298580736 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 1540 0.13877849690271626 No Hit TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCGGCGGCGTTATT 1184 0.1066972339823481 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC 1172 0.10561584309739186 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 1133 0.10210132272128411 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 1116 0.10056935230092945 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 9.011590707968589E-5 7 0.0 0.0 0.0 0.0 9.011590707968589E-5 8 0.0 0.0 0.0 0.0 1.8023181415937177E-4 9 0.0 0.0 0.0 0.0 1.8023181415937177E-4 10 0.0 0.0 0.0 0.0 2.7034772123905767E-4 11 0.0 0.0 0.0 0.0 2.7034772123905767E-4 12 0.0 0.0 0.0 0.0 6.308113495578012E-4 13 0.0 0.0 0.0 0.0 6.308113495578012E-4 14 0.0 0.0 0.0 0.0 6.308113495578012E-4 15 0.0 0.0 0.0 9.011590707968589E-5 8.110431637171731E-4 16 0.0 0.0 0.0 1.8023181415937177E-4 8.110431637171731E-4 17 0.0 0.0 0.0 1.8023181415937177E-4 8.110431637171731E-4 18 0.0 0.0 0.0 1.8023181415937177E-4 8.110431637171731E-4 19 0.0 0.0 0.0 2.7034772123905767E-4 8.110431637171731E-4 20 0.0 0.0 0.0 4.5057953539842947E-4 8.110431637171731E-4 21 0.0 0.0 0.0 7.209272566374871E-4 9.011590707968589E-4 22 0.0 0.0 0.0 8.110431637171731E-4 9.011590707968589E-4 23 0.0 0.0 0.0 0.0013517386061952883 9.011590707968589E-4 24 0.0 0.0 0.0 0.0019825499557530896 9.011590707968589E-4 25 0.0 0.0 0.0 0.002343013584071833 9.011590707968589E-4 26 0.0 0.0 0.0 0.002343013584071833 9.011590707968589E-4 27 0.0 0.0 9.011590707968589E-5 0.0028837090265499484 9.011590707968589E-4 28 0.0 0.0 9.011590707968589E-5 0.003874984004426493 9.011590707968589E-4 29 0.0 0.0 9.011590707968589E-5 0.005767418053099897 9.011590707968589E-4 30 0.0 0.0 9.011590707968589E-5 0.009732517964606077 9.011590707968589E-4 31 0.0 0.0 9.011590707968589E-5 0.015499936017705973 9.011590707968589E-4 32 0.0 0.0 9.011590707968589E-5 0.02279932449116053 9.011590707968589E-4 33 0.0 0.0 9.011590707968589E-5 0.03045917659293383 9.011590707968589E-4 34 0.0 0.0 9.011590707968589E-5 0.03983123092922117 9.912749778765448E-4 35 0.0 0.0 9.011590707968589E-5 0.05010444433630536 9.912749778765448E-4 36 0.0 0.0 9.011590707968589E-5 0.06740669849560504 9.912749778765448E-4 37 0.0 0.0 9.011590707968589E-5 0.0907467184292437 9.912749778765448E-4 38 0.0 0.0 9.011590707968589E-5 0.11868264962394633 9.912749778765448E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTAGCGC 40 7.033324E-4 27.498959 4 GTATCAA 1515 0.0 25.711266 1 GGTATCA 680 0.0 25.243439 1 TACCGTA 55 0.004484366 19.999243 7 CGAATTG 60 0.0074133477 18.33264 14 CCTATAT 75 0.0012907179 17.600126 2 GGCGTTA 340 0.0 17.472288 42 CGCAATA 280 0.0 17.285837 36 TAGCGGC 295 0.0 17.152666 30 ATCAACG 2280 0.0 17.0783 3 ATACGAA 285 0.0 16.984108 40 CTAGCGG 285 0.0 16.982578 29 AACGCAG 2310 0.0 16.856504 6 TCAACGC 2325 0.0 16.747751 4 CGCCCCT 250 0.0 16.719366 5 CAACGCA 2350 0.0 16.663198 5 GAGTATA 80 0.0019839287 16.505323 1 TACGAAT 295 0.0 16.408377 41 GCGCAAT 295 0.0 16.406158 35 GTATTAG 175 3.608875E-9 16.348131 1 >>END_MODULE