##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062231_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1909775 Sequences flagged as poor quality 0 Sequence length 50 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.292925082797712 32.0 32.0 32.0 32.0 32.0 2 31.43309447447998 32.0 32.0 32.0 32.0 32.0 3 31.55915016166826 32.0 32.0 32.0 32.0 32.0 4 31.641927452186774 32.0 32.0 32.0 32.0 32.0 5 31.614201149350055 32.0 32.0 32.0 32.0 32.0 6 35.24894503279182 36.0 36.0 36.0 36.0 36.0 7 35.257052794177326 36.0 36.0 36.0 36.0 36.0 8 35.20732704114359 36.0 36.0 36.0 36.0 36.0 9 35.293309421266905 36.0 36.0 36.0 36.0 36.0 10 35.173193700828634 36.0 36.0 36.0 36.0 36.0 11 35.29444515715202 36.0 36.0 36.0 36.0 36.0 12 35.21059287088793 36.0 36.0 36.0 36.0 36.0 13 35.250211674150094 36.0 36.0 36.0 36.0 36.0 14 35.21561440483826 36.0 36.0 36.0 36.0 36.0 15 35.18946839287351 36.0 36.0 36.0 36.0 36.0 16 35.20233430639735 36.0 36.0 36.0 36.0 36.0 17 35.181228678771056 36.0 36.0 36.0 36.0 36.0 18 35.180414446728015 36.0 36.0 36.0 36.0 36.0 19 35.16506394732364 36.0 36.0 36.0 36.0 36.0 20 35.1720234058986 36.0 36.0 36.0 36.0 36.0 21 35.167548533204176 36.0 36.0 36.0 36.0 36.0 22 35.148974617428756 36.0 36.0 36.0 36.0 36.0 23 35.11986647641738 36.0 36.0 36.0 36.0 36.0 24 35.105951748242596 36.0 36.0 36.0 36.0 36.0 25 35.08884083203519 36.0 36.0 36.0 36.0 36.0 26 35.04617245487034 36.0 36.0 36.0 36.0 36.0 27 35.03411658441439 36.0 36.0 36.0 36.0 36.0 28 35.0171538532026 36.0 36.0 36.0 36.0 36.0 29 34.99787461873781 36.0 36.0 36.0 36.0 36.0 30 34.97608618816353 36.0 36.0 36.0 36.0 36.0 31 34.98365566624341 36.0 36.0 36.0 36.0 36.0 32 34.960136665313975 36.0 36.0 36.0 36.0 36.0 33 34.94100771033237 36.0 36.0 36.0 36.0 36.0 34 34.93111701640245 36.0 36.0 36.0 36.0 36.0 35 34.92227356625781 36.0 36.0 36.0 36.0 36.0 36 34.89509287743321 36.0 36.0 36.0 32.0 36.0 37 34.8889324658664 36.0 36.0 36.0 32.0 36.0 38 34.87149009700096 36.0 36.0 36.0 32.0 36.0 39 34.85792200651909 36.0 36.0 36.0 32.0 36.0 40 34.84792397010119 36.0 36.0 36.0 32.0 36.0 41 34.81671296356901 36.0 36.0 36.0 32.0 36.0 42 34.788561479755465 36.0 36.0 36.0 32.0 36.0 43 34.790298333573325 36.0 36.0 36.0 32.0 36.0 44 34.74377138668168 36.0 36.0 36.0 32.0 36.0 45 34.73044835124556 36.0 36.0 36.0 32.0 36.0 46 34.71783848882722 36.0 36.0 36.0 32.0 36.0 47 34.69295545286749 36.0 36.0 36.0 32.0 36.0 48 34.666803157440015 36.0 36.0 36.0 32.0 36.0 49 34.65804505766386 36.0 36.0 36.0 32.0 36.0 50 34.2456776321818 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 3.0 19 5.0 20 16.0 21 43.0 22 138.0 23 364.0 24 921.0 25 2182.0 26 4543.0 27 8711.0 28 14873.0 29 23381.0 30 35214.0 31 51712.0 32 79132.0 33 134703.0 34 313160.0 35 1240674.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.3552721036769 17.48652026386446 11.774747245126397 26.383460387332242 2 16.696907002719275 19.403351624154777 36.41229700356234 27.48744436956361 3 18.73651999478472 22.768465152664742 28.22246413578996 30.272550716760577 4 12.92539697084735 15.350342317812308 34.465787854590204 37.25847285675014 5 15.065125472896021 36.16410310115066 32.7918210260371 15.97895039991622 6 36.11499173723355 34.25712598153078 15.77879453673004 13.849087744505628 7 31.560471783325262 29.57782984906599 19.76583628961527 19.09586207799348 8 28.802398188268253 32.87313950596275 18.378814258224136 19.945648047544868 9 27.14283096176251 14.16711392703329 18.105221819324267 40.58483329187993 10 16.72885559113863 26.234754724647757 30.499347566096898 26.537042118116716 11 38.04736160018851 20.94178633608671 21.300833867864018 19.71001819586077 12 24.77549699597963 23.201750573628082 27.982682767699213 24.04006966269307 13 29.695592412718774 18.913903470304096 24.919532405649882 26.470971711327252 14 23.952140959013494 18.880286944797163 24.383657760730976 32.78391433545836 15 25.49855349452161 26.692830307235145 21.584427484913142 26.224188713330104 16 26.411427984969905 25.54325970484373 22.761246392231936 25.284065917954436 17 24.719561204853974 25.91776518176225 24.25521331046851 25.107460302915264 18 25.528925779951166 24.728671089195696 25.131861635476998 24.610541495376136 19 26.048042308648924 24.705580500320718 24.640494299066646 24.605882891963713 20 26.20862848262197 23.995270629730943 24.259229393308505 25.53687149433858 21 26.922490869343246 23.901192548860468 24.214318440654004 24.96199814114228 22 26.482281944208086 23.60890680839366 24.56975298137215 25.339058266026104 23 25.01912528962836 23.74766660994096 25.214907515283215 26.018300585147465 24 25.307748899727976 24.41517367411003 24.766056378959604 25.51102104720239 25 25.448862717048275 23.98313724525087 24.750087837756464 25.81791219994439 26 25.200509173127767 24.858163028606167 25.004463904683462 24.936863893582604 27 25.684364306603168 24.328961940343447 24.56679224930816 25.419881503745223 28 25.450126954521014 24.060984249680192 25.060178380396486 25.428710415402318 29 25.135592528089827 24.53986509341982 25.05495437660949 25.269588001880862 30 25.14370960867211 24.612279906207814 25.152558915965095 25.091451569154984 31 25.66906102632469 24.221239670200433 24.40021447653796 25.70948482693691 32 25.601306552976872 24.26412142271429 24.172120237223773 25.962451787085065 33 25.084473478757403 24.176197041425386 24.7800914350464 25.95923804477081 34 25.928125150542165 24.184558929794466 24.82243879348443 25.064877126178942 35 26.140122412454254 24.05762360238625 24.93615733388209 24.866096651277402 36 25.054626968364268 24.60802892074495 24.595776142794083 25.741567968096696 37 26.140100453254465 24.230368049330174 24.52794720130028 25.10158429611508 38 25.302980717623804 24.0093728318781 24.990849707426268 25.696796743071825 39 25.966743499975394 24.102951048350526 24.25742055816379 25.67288489351029 40 25.966816981294098 24.297507765324866 24.675196829778635 25.0604784236024 41 25.107539859783206 24.76969583041193 25.010930710032742 25.111833599772115 42 26.207083258713737 24.600012776969617 24.497482832256193 24.695421132060456 43 25.74469578039761 23.832464264132806 24.741714169615637 25.681125785853947 44 25.38608239217132 24.3670720365964 24.49143738060927 25.755408190623008 45 25.373414119072567 24.685939416979146 24.44077553890759 25.499870925040703 46 25.29192638951725 24.446832219038523 24.580306724308386 25.68093466713584 47 25.440344672664644 24.443933616580985 24.911952010573092 25.203769700181276 48 26.187543789646323 24.83633537868291 23.908544701832437 25.067576129838333 49 25.41787648942381 24.934924844806687 24.116478113226318 25.53072055254318 50 25.51082816422323 25.002644336250658 24.16164068235395 25.324886817172164 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 69.0 1 59.0 2 49.0 3 165.5 4 282.0 5 297.5 6 313.0 7 256.0 8 199.0 9 248.5 10 298.0 11 520.0 12 742.0 13 1434.5 14 2127.0 15 2653.0 16 3179.0 17 3045.5 18 2912.0 19 2717.0 20 2522.0 21 3033.0 22 3544.0 23 4371.0 24 5198.0 25 6814.0 26 8430.0 27 10692.5 28 12955.0 29 15068.0 30 17181.0 31 20037.5 32 22894.0 33 26780.5 34 30667.0 35 36331.0 36 41995.0 37 50978.0 38 59961.0 39 67545.5 40 75130.0 41 83431.0 42 91732.0 43 96999.5 44 102267.0 45 112586.0 46 122905.0 47 131537.5 48 140170.0 49 147196.0 50 154222.0 51 151510.5 52 148799.0 53 149601.5 54 150404.0 55 150788.5 56 151173.0 57 146012.5 58 140852.0 59 130146.5 60 119441.0 61 104924.5 62 90408.0 63 78008.0 64 65608.0 65 55096.5 66 44585.0 67 38393.5 68 32202.0 69 28370.5 70 24539.0 71 19275.0 72 14011.0 73 12222.0 74 10433.0 75 7765.5 76 5098.0 77 4568.0 78 4038.0 79 3437.5 80 2837.0 81 2182.0 82 1527.0 83 1271.0 84 1015.0 85 781.0 86 547.0 87 367.0 88 187.0 89 118.5 90 50.0 91 36.5 92 23.0 93 19.0 94 15.0 95 16.5 96 18.0 97 17.0 98 16.0 99 11.0 100 6.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.03209802201830059 2 0.0038748020054718488 3 1.0472437852626618E-4 4 0.0 5 0.0 6 1.5708656778939928E-4 7 0.0 8 0.0 9 0.0 10 1.5708656778939928E-4 11 0.0 12 5.236218926313309E-5 13 0.0 14 0.0 15 0.0 16 3.6653532484193165E-4 17 0.0 18 4.188975141050647E-4 19 0.0 20 3.6653532484193165E-4 21 0.0 22 0.0 23 0.0 24 0.0010472437852626618 25 2.0944875705253236E-4 26 6.283462711575971E-4 27 5.236218926313309E-4 28 0.0018850388134727914 29 4.7125970336819785E-4 30 0.001099605974525795 31 4.7125970336819785E-4 32 8.901572174732625E-4 33 2.0944875705253236E-4 34 5.75984081894464E-4 35 1.0472437852626618E-4 36 2.0944875705253236E-4 37 0.001623227867157126 38 0.0 39 6.807084604207302E-4 40 1.5708656778939928E-4 41 9.425194067363957E-4 42 0.004660234844418845 43 0.0036129910591561837 44 0.004136612951787514 45 0.001675590056420259 46 0.0024610228953672554 47 0.001099605974525795 48 0.004031888573261248 49 0.003141731355787986 50 0.001727952245683392 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1909775.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 53.16914630541961 #Duplication Level Percentage of deduplicated Percentage of total 1 76.16124115360203 40.49428173698211 2 13.749942539427524 14.621454131398695 3 4.254825153580811 6.786762632841527 4 1.8292756167355022 3.890440915965865 5 1.0168797101476228 2.703331304192582 6 0.6262838891172415 1.9979387837521085 7 0.4377000136540111 1.6290495244698 8 0.30672336935419225 1.3046575760387444 9 0.2396982251589223 1.1470095002361735 >10 1.23672258943319 11.583102995179386 >50 0.07358003715971424 2.707267564596032 >100 0.05681678085925701 6.271491715582997 >500 0.007435760891758097 2.6953590133067546 >1k 0.0028751608781464643 2.1678526054572536 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 2305 0.12069484625152177 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 1959 0.10257752876647773 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 1946 0.101896820306057 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.5708656778939928E-4 2 0.0 0.0 0.0 0.0 1.5708656778939928E-4 3 0.0 0.0 0.0 0.0 1.5708656778939928E-4 4 0.0 0.0 0.0 0.0 1.5708656778939928E-4 5 0.0 0.0 0.0 0.0 1.5708656778939928E-4 6 0.0 0.0 0.0 0.0 1.5708656778939928E-4 7 0.0 0.0 0.0 0.0 1.5708656778939928E-4 8 0.0 0.0 0.0 0.0 1.5708656778939928E-4 9 0.0 0.0 0.0 0.0 1.5708656778939928E-4 10 0.0 0.0 0.0 0.0 1.5708656778939928E-4 11 0.0 0.0 0.0 0.0 1.5708656778939928E-4 12 0.0 0.0 0.0 0.0 6.807084604207302E-4 13 0.0 0.0 0.0 0.0 8.901572174732625E-4 14 0.0 0.0 0.0 0.0 8.901572174732625E-4 15 0.0 0.0 0.0 1.0472437852626618E-4 0.0010472437852626618 16 0.0 0.0 0.0 1.0472437852626618E-4 0.001099605974525795 17 0.0 0.0 0.0 1.5708656778939928E-4 0.001099605974525795 18 0.0 0.0 0.0 2.6181094631566544E-4 0.001099605974525795 19 0.0 0.0 0.0 2.6181094631566544E-4 0.001099605974525795 20 0.0 0.0 0.0 4.712597033681978E-4 0.001099605974525795 21 0.0 0.0 0.0 6.283462711575971E-4 0.001099605974525795 22 0.0 0.0 0.0 7.854328389469964E-4 0.001099605974525795 23 0.0 5.236218926313309E-5 0.0 0.001099605974525795 0.001204330353052061 24 0.0 5.236218926313309E-5 0.0 0.0013090547315783272 0.001204330353052061 25 0.0 5.236218926313309E-5 0.0 0.0014137791101045934 0.001204330353052061 26 0.0 5.236218926313309E-5 0.0 0.001623227867157126 0.0013090547315783272 27 0.0 5.236218926313309E-5 0.0 0.0019374010027359244 0.0013090547315783272 28 0.0 5.236218926313309E-5 0.0 0.002408660706104122 0.0013090547315783272 29 0.0 5.236218926313309E-5 0.0 0.0032988179235773846 0.0013090547315783272 30 0.0 5.236218926313309E-5 0.0 0.005131494547787043 0.0013090547315783272 31 0.0 5.236218926313309E-5 0.0 0.008377950282101294 0.0013090547315783272 32 0.0 5.236218926313309E-5 0.0 0.012671649801678208 0.0013090547315783272 33 0.0 5.236218926313309E-5 0.0 0.01665117618567632 0.0013614169208414604 34 0.0 5.236218926313309E-5 0.0 0.021416135408621435 0.0014661412993677266 35 0.0 5.236218926313309E-5 0.0 0.026338181199355944 0.0014661412993677266 36 0.0 5.236218926313309E-5 0.0 0.03246455734314252 0.0014661412993677266 37 0.0 5.236218926313309E-5 0.0 0.04236101111387467 0.0014661412993677266 38 0.0 5.236218926313309E-5 0.0 0.05618462907934181 0.0014661412993677266 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 905 0.0 27.721382 1 GTATCAA 2110 0.0 27.534683 1 TCAACGC 3105 0.0 18.563099 4 GTGTACG 120 3.153964E-7 18.339073 1 TCTAGCG 410 0.0 18.243402 28 ATCAACG 3215 0.0 18.064825 3 CAACGCA 3195 0.0 18.040195 5 TTAACGG 135 5.5322744E-8 17.925434 35 AACGCAG 3290 0.0 17.519278 6 TATCAAC 3365 0.0 17.19418 2 ACCGTCG 540 0.0 17.110641 8 CAATACG 465 0.0 17.032684 38 TAAACGC 350 0.0 16.970964 28 GGCGTTA 615 0.0 16.814308 42 ATACCGT 550 0.0 16.79954 6 TAACGGC 145 1.2503551E-7 16.689634 36 CTAGCGG 440 0.0 16.49955 29 TCATATA 135 1.0865624E-6 16.295849 2 TAGCGGC 460 0.0 16.260424 30 GGATAGT 150 1.8397805E-7 16.132893 6 >>END_MODULE