##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062230_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1186999 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.31394634704831 32.0 32.0 32.0 32.0 32.0 2 31.478444379481363 32.0 32.0 32.0 32.0 32.0 3 31.59094573794923 32.0 32.0 32.0 32.0 32.0 4 31.661586067048077 32.0 32.0 32.0 32.0 32.0 5 31.638785710855696 32.0 32.0 32.0 32.0 32.0 6 35.29394380281702 36.0 36.0 36.0 36.0 36.0 7 35.29702215418884 36.0 36.0 36.0 36.0 36.0 8 35.24722261771071 36.0 36.0 36.0 36.0 36.0 9 35.323010381643115 36.0 36.0 36.0 36.0 36.0 10 35.21768847320006 36.0 36.0 36.0 36.0 36.0 11 35.333671721711646 36.0 36.0 36.0 36.0 36.0 12 35.2546657579324 36.0 36.0 36.0 36.0 36.0 13 35.286894091738915 36.0 36.0 36.0 36.0 36.0 14 35.247913435478885 36.0 36.0 36.0 36.0 36.0 15 35.23189910016773 36.0 36.0 36.0 36.0 36.0 16 35.236939542493296 36.0 36.0 36.0 36.0 36.0 17 35.222810634212834 36.0 36.0 36.0 36.0 36.0 18 35.21629335829264 36.0 36.0 36.0 36.0 36.0 19 35.21293446751008 36.0 36.0 36.0 36.0 36.0 20 35.20994710189309 36.0 36.0 36.0 36.0 36.0 21 35.19949974684056 36.0 36.0 36.0 36.0 36.0 22 35.18121919226554 36.0 36.0 36.0 36.0 36.0 23 35.15633543077964 36.0 36.0 36.0 36.0 36.0 24 35.13718798415163 36.0 36.0 36.0 36.0 36.0 25 35.12416017199678 36.0 36.0 36.0 36.0 36.0 26 35.08329071886328 36.0 36.0 36.0 36.0 36.0 27 35.06664622295385 36.0 36.0 36.0 36.0 36.0 28 35.051329445096414 36.0 36.0 36.0 36.0 36.0 29 35.0327632963465 36.0 36.0 36.0 36.0 36.0 30 35.01553918748036 36.0 36.0 36.0 36.0 36.0 31 35.024337846956904 36.0 36.0 36.0 36.0 36.0 32 34.995899743807705 36.0 36.0 36.0 36.0 36.0 33 34.97338413932952 36.0 36.0 36.0 36.0 36.0 34 34.960764920610714 36.0 36.0 36.0 36.0 36.0 35 34.95378092146666 36.0 36.0 36.0 36.0 36.0 36 34.92449783024249 36.0 36.0 36.0 36.0 36.0 37 34.917571960886235 36.0 36.0 36.0 36.0 36.0 38 34.900000758214624 36.0 36.0 36.0 32.0 36.0 39 34.886968733756305 36.0 36.0 36.0 32.0 36.0 40 34.876202086101166 36.0 36.0 36.0 32.0 36.0 41 34.84677998886267 36.0 36.0 36.0 32.0 36.0 42 34.816924866828025 36.0 36.0 36.0 32.0 36.0 43 34.82068729628247 36.0 36.0 36.0 32.0 36.0 44 34.768218001868576 36.0 36.0 36.0 32.0 36.0 45 34.7626105834967 36.0 36.0 36.0 32.0 36.0 46 34.74261983371511 36.0 36.0 36.0 32.0 36.0 47 34.71252713776507 36.0 36.0 36.0 32.0 36.0 48 34.68685651799201 36.0 36.0 36.0 32.0 36.0 49 34.67903848276199 36.0 36.0 36.0 32.0 36.0 50 34.27526813417703 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 6.0 20 8.0 21 39.0 22 85.0 23 216.0 24 567.0 25 1246.0 26 2762.0 27 5056.0 28 8760.0 29 13924.0 30 21058.0 31 31227.0 32 47373.0 33 81144.0 34 187002.0 35 786525.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.93831244074581 17.909196249868323 12.4771515853787 25.675339724007163 2 16.427987699566117 19.557942626058384 36.86237836471629 27.15169130965921 3 18.87029295752815 22.803661000271273 28.248320553193857 30.077725489006724 4 12.982150785299734 15.700687195187191 34.687897799408425 36.62926422010465 5 15.001529066157596 36.31452090524087 32.666750351095494 16.017199677506046 6 35.58549678515104 34.33443527841805 16.154447544718078 13.925620391712833 7 31.432545436011317 29.90760733581073 19.366402162091124 19.29344506608683 8 28.770959368963243 32.88873874367207 18.432281745814443 19.908020141550246 9 27.07087369071078 14.639776444630535 18.55839811154011 39.730951753118575 10 17.065150910111054 26.424391616498088 30.097523331968546 26.412934141422312 11 37.48023376599306 21.332284188950453 21.406252237786216 19.781229807270268 12 24.888647757917234 23.44593382134273 27.823865058016057 23.84155336272398 13 29.61139815619053 19.17448961625073 24.942986472608656 26.271125754950088 14 23.917627563291965 19.374237046535 24.55991959555147 32.148215794621564 15 25.41762882698301 26.77306383577408 21.846522195890643 25.962785141352267 16 26.12071383980812 25.879178324314715 23.049666003644514 24.95044183223265 17 24.464216060839142 25.964133078460893 24.582918772467373 24.98873208823259 18 25.160067936201973 24.912046881371126 25.548611789761715 24.379273392665183 19 25.964133078460893 24.866154057417067 24.96379525172304 24.205917612399 20 26.152174187759847 24.094625503898502 24.68713010585554 25.066070202486113 21 26.856383198300925 24.077863587079687 24.402632184188867 24.663121030430524 22 26.339280825004906 23.883507905229912 24.784603862345293 24.99260740741989 23 24.797788031477754 24.014719498027375 25.28902768920225 25.898464781292624 24 24.991617424299864 24.56271598822564 25.14907505227526 25.296591535199237 25 25.14576676138733 24.18763621536328 25.24298672534686 25.423610297902528 26 24.874093719092095 25.069882408841153 25.379656510479414 24.67636736158734 27 25.444294953719186 24.54631156207324 24.814383909593403 25.195009574614176 28 25.04781065128638 24.479727441376138 25.328187475041574 25.144274432295905 29 24.839362724738436 24.77693596665855 25.292778125529175 25.090923183073837 30 25.03178215094184 24.73043091457615 25.370960254830088 24.866826679651926 31 25.469106336947796 24.51989947691263 24.61998448176945 25.391009704370127 32 25.510704404762308 24.484156537387065 24.519203226991344 25.485935830859287 33 24.89757784126187 24.33237096240182 24.953096000923335 25.816955195412973 34 25.530457609726753 24.531042279910427 25.103749471353687 24.834750639009126 35 25.84798238238778 24.13938065398814 25.34241959100046 24.67021737262362 36 24.909014015211508 24.74827210875184 24.88154972721054 25.46116414882611 37 25.801799008750727 24.552838405138388 24.801451068967058 24.843911517143827 38 25.08601545413801 24.370343286750757 25.055181314848575 25.488459944262658 39 25.736844632670785 24.32865734839556 24.67828207048603 25.256215948447625 40 25.85486592659303 24.515184932759 24.890332679303015 24.739616461344955 41 24.828241589840495 24.92765295660357 25.314936052374627 24.929169401181312 42 26.06634072858367 24.80418018540221 24.762391811500734 24.367087274513388 43 25.622264009786377 24.014032533640677 25.087703335254215 25.276000121318738 44 25.06002780235056 24.717890391339147 24.810312144572222 25.41176966173807 45 25.274393839828807 24.779693002409473 24.750543395844918 25.195369761916798 46 25.07925622571027 24.800732619865826 24.807640948867412 25.31237020555649 47 25.32826840417663 24.605766201117792 25.114449538579226 24.951515856126356 48 26.049619446077944 25.04747445983585 24.117278344400876 24.78562774968533 49 25.252641839594865 25.09551736078055 24.38993156449644 25.26190923512815 50 25.356870859253366 25.24086255585585 24.306814582167917 25.09545200272287 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 106.0 1 70.5 2 35.0 3 112.5 4 190.0 5 188.0 6 186.0 7 153.0 8 120.0 9 164.0 10 208.0 11 362.0 12 516.0 13 991.5 14 1467.0 15 1881.5 16 2296.0 17 2202.0 18 2108.0 19 2034.0 20 1960.0 21 2262.5 22 2565.0 23 3157.5 24 3750.0 25 4721.5 26 5693.0 27 7319.5 28 8946.0 29 10487.0 30 12028.0 31 13954.5 32 15881.0 33 18298.0 34 20715.0 35 24165.0 36 27615.0 37 33214.5 38 38814.0 39 43766.0 40 48718.0 41 53549.5 42 58381.0 43 61734.5 44 65088.0 45 71604.5 46 78121.0 47 83216.5 48 88312.0 49 92174.0 50 96036.0 51 94492.5 52 92949.0 53 92690.5 54 92432.0 55 92704.5 56 92977.0 57 89447.5 58 85918.0 59 78420.0 60 70922.0 61 62166.5 62 53411.0 63 45545.0 64 37679.0 65 31883.0 66 26087.0 67 22283.5 68 18480.0 69 16176.0 70 13872.0 71 10825.0 72 7778.0 73 6897.0 74 6016.0 75 4377.5 76 2739.0 77 2466.5 78 2194.0 79 1893.0 80 1592.0 81 1249.5 82 907.0 83 765.0 84 623.0 85 478.0 86 333.0 87 228.5 88 124.0 89 80.5 90 37.0 91 24.5 92 12.0 93 14.0 94 16.0 95 21.5 96 27.0 97 21.0 98 15.0 99 9.5 100 4.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.031508029914094286 2 0.004128057395162085 3 8.424606928902214E-5 4 0.0 5 0.0 6 5.89722485023155E-4 7 0.0 8 0.0 9 0.0 10 8.424606928902214E-5 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 8.424606928902214E-4 17 0.0 18 2.527382078670664E-4 19 0.0 20 3.369842771560886E-4 21 0.0 22 0.0 23 1.684921385780443E-4 24 0.001095198900757288 25 0.0 26 4.212303464451107E-4 27 5.054764157341328E-4 28 0.0021061517322255537 29 6.739685543121772E-4 30 0.0010109528314682656 31 6.739685543121772E-4 32 9.267067621792436E-4 33 0.0 34 4.212303464451107E-4 35 4.212303464451107E-4 36 2.527382078670664E-4 37 0.0010109528314682656 38 2.527382078670664E-4 39 0.0010109528314682656 40 0.0 41 0.0010109528314682656 42 0.005560240573075461 43 0.0036225809794279526 44 0.004128057395162085 45 0.0016006753164914207 46 0.002190397801514576 47 0.001095198900757288 48 0.0037910731180059967 49 0.00353833491013893 50 0.0012636910393353322 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1186999.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 57.92519382694422 #Duplication Level Percentage of deduplicated Percentage of total 1 79.24476032491822 45.902681015906275 2 12.510547543324247 14.493517826565158 3 3.572535833572964 6.208194918402531 4 1.4781532290763053 3.424892492006739 5 0.8285462567651442 2.3996851258855036 6 0.5143954392915681 1.7877873314796122 7 0.33433289675081546 1.3556408492910301 8 0.2457849921358412 1.138971464737805 9 0.18971277961999083 0.989023457784269 >10 0.9433021132318297 9.834985763807593 >50 0.07595651166076929 3.064499968134179 >100 0.055818828463795114 6.6400920354407145 >500 0.00483469736239117 1.8888152275061207 >1k 0.0013185538261066827 0.8712125230524256 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 1351 0.11381643960946893 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 1210 0.10193774383971681 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 1198 0.10092679100824854 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 8.424606928902214E-5 2 0.0 0.0 0.0 0.0 8.424606928902214E-5 3 0.0 0.0 0.0 0.0 8.424606928902214E-5 4 0.0 0.0 0.0 0.0 8.424606928902214E-5 5 0.0 0.0 0.0 0.0 8.424606928902214E-5 6 0.0 0.0 0.0 0.0 8.424606928902214E-5 7 0.0 0.0 0.0 0.0 8.424606928902214E-5 8 0.0 0.0 0.0 0.0 8.424606928902214E-5 9 0.0 0.0 0.0 0.0 8.424606928902214E-5 10 0.0 0.0 0.0 0.0 8.424606928902214E-5 11 0.0 0.0 0.0 0.0 8.424606928902214E-5 12 0.0 0.0 0.0 0.0 4.2123034644511075E-4 13 0.0 0.0 0.0 0.0 6.739685543121772E-4 14 0.0 0.0 0.0 8.424606928902214E-5 6.739685543121772E-4 15 0.0 0.0 0.0 8.424606928902214E-5 0.0010109528314682658 16 0.0 0.0 0.0 8.424606928902214E-5 0.001095198900757288 17 0.0 0.0 0.0 8.424606928902214E-5 0.001095198900757288 18 0.0 0.0 0.0 2.5273820786706646E-4 0.00117944497004631 19 0.0 0.0 0.0 3.369842771560886E-4 0.0013479371086243543 20 0.0 0.0 0.0 3.369842771560886E-4 0.0015164292472023987 21 0.0 0.0 0.0 5.054764157341329E-4 0.001684921385780443 22 0.0 0.0 0.0 6.739685543121772E-4 0.001684921385780443 23 0.0 0.0 0.0 0.00117944497004631 0.001684921385780443 24 0.0 0.0 0.0 0.0016006753164914207 0.001684921385780443 25 0.0 0.0 0.0 0.0016006753164914207 0.001684921385780443 26 0.0 0.0 0.0 0.002274643870803598 0.0018534135243584873 27 0.0 0.0 0.0 0.0032013506329828414 0.0018534135243584873 28 0.0 0.0 0.0 0.003875319187295019 0.0018534135243584873 29 0.0 0.0 0.0 0.005139010226630351 0.0018534135243584873 30 0.0 0.0 0.0 0.006739685543121772 0.0018534135243584873 31 0.0 0.0 0.0 0.0110362350768619 0.0019376595936475094 32 0.0 0.0 0.0 0.015501276749180075 0.0019376595936475094 33 0.0 0.0 0.0 0.019713580213631184 0.0019376595936475094 34 0.0 0.0 0.0 0.025021082578839577 0.0020219056629365317 35 0.0 0.0 0.0 0.03125529170622722 0.0020219056629365317 36 0.0 0.0 0.0 0.040185375050863566 0.0020219056629365317 37 0.0 0.0 0.0 0.053496253998529066 0.0020219056629365317 38 0.0 0.0 0.0 0.06908177681699816 0.0020219056629365317 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATCGTTA 40 7.03434E-4 27.498474 29 GTATCAA 1710 0.0 25.863659 1 GGTATCA 820 0.0 25.223425 1 ATCGATT 90 1.5133992E-8 24.443089 29 CGGATCG 90 4.0821942E-7 21.999704 26 ATACGAA 270 0.0 20.373531 40 GTCTAGC 130 1.6207196E-9 20.310843 1 TACGCAG 65 4.933938E-4 20.306564 5 ACCGTAT 55 0.0044850064 19.99889 8 CGAGCCG 290 0.0 19.723043 15 CGAATGC 270 0.0 19.559414 43 CGCAATA 275 0.0 19.200552 36 GTCTTAG 200 0.0 18.702902 1 GGGTACG 60 0.0074053966 18.336178 1 ATACCGT 325 0.0 18.275908 6 GCGCAAT 290 0.0 18.206654 35 TAGGACG 85 1.4314137E-4 18.116642 4 CAATACG 305 0.0 18.035585 38 AATACGA 305 0.0 18.035585 39 TACGAAT 320 0.0 17.877773 41 >>END_MODULE