SRR4062228_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR4062228_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	522713
Sequences flagged as poor quality	0
Sequence length	25
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTT	1546	0.29576459739857247	No Hit
TATCAACGCAGAGTACTTTTTTTTT	1036	0.19819671597989721	No Hit
GGTATCAACGCAGAGTACTTTTTTT	603	0.1153596715597278	No Hit
ACGCAGAGTACTTTTTTTTTTTTTT	560	0.1071333599891336	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGTCAAT	25	0.006027883	18.999424	19
CCGTCGT	50	8.691419E-5	15.200996	9
GCACCGC	40	0.0052672443	14.2523	6
TAACGCC	40	0.0052705947	14.250935	4
CGCCGCA	40	0.0052705947	14.250935	10
TAGGGTC	55	1.9551412E-4	13.819088	4
ACCGTCG	55	1.9551412E-4	13.819088	8
ATACCGT	70	7.2283983E-6	13.573619	6
ACGCCGC	50	0.0014954014	13.302146	6
GGGTTCC	50	0.0014954014	13.302146	7
TTAGGAC	100	1.0029908E-8	13.298324	3
TACCGTC	60	4.0783818E-4	12.668711	7
CGTTCTT	60	4.0816807E-4	12.667497	10
CGTCGTA	60	4.0816807E-4	12.667497	10
GTATTAA	60	4.0948996E-4	12.662643	1
GTTTAGG	60	4.0948996E-4	12.662643	1
GTTTAGA	60	4.0948996E-4	12.662643	1
CCGTTCT	70	1.0875594E-4	12.215086	9
ATGGCCG	55	0.003060052	12.09286	5
TGGCCGT	55	0.003060052	12.09286	6