##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062228_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 522713 Sequences flagged as poor quality 0 Sequence length 25 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.268558463248475 32.0 32.0 32.0 32.0 32.0 2 30.916745900714158 32.0 32.0 32.0 32.0 32.0 3 30.95162163558205 32.0 32.0 32.0 32.0 32.0 4 30.94003592793751 32.0 32.0 32.0 32.0 32.0 5 30.932226671232588 32.0 32.0 32.0 32.0 32.0 6 34.5677781115067 36.0 36.0 36.0 32.0 36.0 7 34.48994572547459 36.0 36.0 36.0 32.0 36.0 8 34.44474118684632 36.0 36.0 36.0 32.0 36.0 9 34.536064723854196 36.0 36.0 36.0 32.0 36.0 10 34.299870100801016 36.0 36.0 36.0 32.0 36.0 11 34.54572203101893 36.0 36.0 36.0 32.0 36.0 12 34.40581351525598 36.0 36.0 36.0 32.0 36.0 13 34.45188277314703 36.0 36.0 36.0 32.0 36.0 14 34.38631715683368 36.0 36.0 36.0 32.0 36.0 15 34.36784047842698 36.0 36.0 36.0 32.0 36.0 16 34.360666369499135 36.0 36.0 36.0 32.0 36.0 17 34.311260672682714 36.0 36.0 36.0 32.0 36.0 18 34.32131016446884 36.0 36.0 36.0 32.0 36.0 19 34.30052437953523 36.0 36.0 36.0 32.0 36.0 20 34.26307361783618 36.0 36.0 36.0 32.0 36.0 21 34.24344908200102 36.0 36.0 36.0 32.0 36.0 22 34.236634635067425 36.0 36.0 36.0 32.0 36.0 23 34.22096829426473 36.0 36.0 36.0 32.0 36.0 24 34.18720406800673 36.0 36.0 36.0 32.0 36.0 25 33.85152846782077 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 3 1.0 4 6.0 5 40.0 6 110.0 7 28.0 8 82.0 9 75.0 10 39.0 11 6.0 12 25.0 13 25.0 14 95.0 15 137.0 16 225.0 17 291.0 18 366.0 19 486.0 20 656.0 21 978.0 22 1391.0 23 1992.0 24 2700.0 25 3775.0 26 5187.0 27 6566.0 28 8854.0 29 11999.0 30 15755.0 31 21978.0 32 31811.0 33 46183.0 34 105962.0 35 254889.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.11819286213065 18.77751312882027 12.124047024612352 24.980246984436725 2 15.546993373023769 20.260678920705857 39.94015825158022 24.252169454690154 3 19.07711733083354 24.41985039505653 28.967496317269614 27.535535956840313 4 11.873830506139724 16.603847228227803 38.125978165621376 33.3963441000111 5 13.275066215533476 37.9656138524427 34.91740282009278 13.841917111931043 6 31.999777932204232 37.484086736618025 17.664727402208808 12.851407928968936 7 28.735416459196728 31.5854788916892 21.06005009920255 18.619054549911525 8 25.940381687429976 35.434305905334625 19.8749413488332 18.750371058402198 9 26.12716143020218 15.6142024255518 19.95219379898412 38.3064423452619 10 14.935443086471784 28.418834527412745 33.33531282326347 23.310409562851998 11 34.96660778806769 22.892535700738346 23.60999888884206 18.530857622351903 12 23.447625870890747 25.327811226708402 30.272229384529037 20.952333517871818 13 28.256488842064936 21.443539890815057 26.191169428215687 24.10880183890432 14 21.585324277839703 21.588197213635336 27.361840517588114 29.464637990936843 15 23.651977686849644 29.48925719890273 23.515777052396057 23.342988061851564 16 23.24093244897138 28.140101013389923 25.989209149813547 22.629757387825148 17 21.7820777051617 28.021782269248156 26.941671327546178 23.25446869804396 18 22.04991189764805 27.64441124645675 28.21975791005899 22.085918945836205 19 23.525063719698437 26.923894456051123 27.409523773048722 22.14151805120172 20 23.670131282648324 26.98340967232954 27.222958378651636 22.123500666370504 21 24.133170183390494 26.294523944934976 26.77286732194731 22.79943854972722 22 23.316723034437324 27.121451798853236 27.109769690098553 22.452055476610884 23 22.721224154535726 27.125507623203333 27.2892107213084 22.86405750095254 24 22.801474460242233 26.960984250083776 27.74034180669252 22.497199482981472 25 22.81942678574164 27.16085078353579 27.605467134388263 22.41425529633431 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 374.0 1 374.0 2 345.0 3 316.0 4 316.0 5 316.0 6 664.0 7 1012.0 8 1012.0 9 1012.0 10 1232.5 11 1453.0 12 1453.0 13 1453.0 14 1904.0 15 2355.0 16 2355.0 17 2355.0 18 4140.0 19 5925.0 20 5925.0 21 5925.0 22 9072.0 23 12219.0 24 12219.0 25 12219.0 26 17901.0 27 23583.0 28 23583.0 29 23583.0 30 29775.5 31 35968.0 32 35968.0 33 35968.0 34 40952.5 35 45937.0 36 45937.0 37 45937.0 38 50060.5 39 54184.0 40 54184.0 41 54184.0 42 56727.5 43 59271.0 44 59271.0 45 59271.0 46 63345.5 47 67420.0 48 67420.0 49 67420.0 50 65912.0 51 64404.0 52 64404.0 53 64404.0 54 58071.5 55 51739.0 56 51739.0 57 51739.0 58 45543.0 59 39347.0 60 39347.0 61 39347.0 62 32871.5 63 26396.0 64 26396.0 65 26396.0 66 20902.0 67 15408.0 68 15408.0 69 15408.0 70 11593.0 71 7778.0 72 7778.0 73 7778.0 74 5866.0 75 3954.0 76 3954.0 77 3954.0 78 3009.0 79 2064.0 80 2064.0 81 2064.0 82 1450.0 83 836.0 84 836.0 85 836.0 86 602.5 87 369.0 88 369.0 89 369.0 90 254.0 91 139.0 92 139.0 93 139.0 94 86.5 95 34.0 96 34.0 97 34.0 98 131.0 99 228.0 100 228.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0015304765712733375 2 1.9130957140916718E-4 3 5.739287142275015E-4 4 0.009756788141867525 5 0.03386179413942259 6 0.0669583499932085 7 0.10502895470363277 8 0.10675074084631528 9 0.11574229070254614 10 0.13257753298655284 11 0.1406125349857379 12 0.13200360427232535 13 0.12683824584427783 14 0.11459443327409113 15 0.13181229470091618 16 0.11555098113113697 17 0.12186419698763948 18 0.11344657584563614 19 0.09642002399022025 20 0.0920199038478094 21 0.09450692827612858 22 0.10464633556081443 23 0.08149787742030522 24 0.09335907084767359 25 0.08895895070526273 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 522713.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 61.39165269617094 #Duplication Level Percentage of deduplicated Percentage of total 1 76.57855523706755 47.01284067088593 2 14.672039106894697 18.014814583902343 3 4.371625561036996 8.051439544826602 4 1.6766144535685399 4.117205289554408 5 0.8235651814141219 2.5280013795017395 6 0.43669379602804986 1.608561231619593 7 0.2761194741898438 1.1866001603478558 8 0.16691104837110216 0.8197556090201995 9 0.12496387607293978 0.6904564991493539 >10 0.7669863124277719 8.930187576015863 >50 0.07301996358759036 3.0356168853666614 >100 0.03165242784207095 3.283999308450015 >500 6.267807493479255E-4 0.22375600185876812 >1k 6.267807493479255E-4 0.49676525950072165 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 1546 0.29576459739857247 No Hit TATCAACGCAGAGTACTTTTTTTTT 1036 0.19819671597989721 No Hit GGTATCAACGCAGAGTACTTTTTTT 603 0.1153596715597278 No Hit ACGCAGAGTACTTTTTTTTTTTTTT 560 0.1071333599891336 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 1.9130957140916718E-4 0.0 12 0.0 0.0 0.0 1.9130957140916718E-4 0.0 13 0.0 0.0 0.0 1.9130957140916718E-4 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTCAAT 25 0.006027883 18.999424 19 CCGTCGT 50 8.691419E-5 15.200996 9 GCACCGC 40 0.0052672443 14.2523 6 TAACGCC 40 0.0052705947 14.250935 4 CGCCGCA 40 0.0052705947 14.250935 10 TAGGGTC 55 1.9551412E-4 13.819088 4 ACCGTCG 55 1.9551412E-4 13.819088 8 ATACCGT 70 7.2283983E-6 13.573619 6 ACGCCGC 50 0.0014954014 13.302146 6 GGGTTCC 50 0.0014954014 13.302146 7 TTAGGAC 100 1.0029908E-8 13.298324 3 TACCGTC 60 4.0783818E-4 12.668711 7 CGTTCTT 60 4.0816807E-4 12.667497 10 CGTCGTA 60 4.0816807E-4 12.667497 10 GTATTAA 60 4.0948996E-4 12.662643 1 GTTTAGG 60 4.0948996E-4 12.662643 1 GTTTAGA 60 4.0948996E-4 12.662643 1 CCGTTCT 70 1.0875594E-4 12.215086 9 ATGGCCG 55 0.003060052 12.09286 5 TGGCCGT 55 0.003060052 12.09286 6 >>END_MODULE