##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062228_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 522713 Sequences flagged as poor quality 0 Sequence length 50 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.238364073592965 32.0 32.0 32.0 32.0 32.0 2 31.456962042267936 32.0 32.0 32.0 32.0 32.0 3 31.585166238452075 32.0 32.0 32.0 32.0 32.0 4 31.664934677346842 32.0 32.0 32.0 32.0 32.0 5 31.652587557608094 32.0 32.0 32.0 32.0 32.0 6 35.28424010881688 36.0 36.0 36.0 36.0 36.0 7 35.28702366308089 36.0 36.0 36.0 36.0 36.0 8 35.24092188256271 36.0 36.0 36.0 36.0 36.0 9 35.310943098794176 36.0 36.0 36.0 36.0 36.0 10 35.21372148769975 36.0 36.0 36.0 36.0 36.0 11 35.33410494860468 36.0 36.0 36.0 36.0 36.0 12 35.255176358728406 36.0 36.0 36.0 36.0 36.0 13 35.28409662663833 36.0 36.0 36.0 36.0 36.0 14 35.25330917731145 36.0 36.0 36.0 36.0 36.0 15 35.23470432149191 36.0 36.0 36.0 36.0 36.0 16 35.24746849609633 36.0 36.0 36.0 36.0 36.0 17 35.231329620652254 36.0 36.0 36.0 36.0 36.0 18 35.22852310923968 36.0 36.0 36.0 36.0 36.0 19 35.21852144484641 36.0 36.0 36.0 36.0 36.0 20 35.203788694752184 36.0 36.0 36.0 36.0 36.0 21 35.187328419228145 36.0 36.0 36.0 36.0 36.0 22 35.175756103253605 36.0 36.0 36.0 36.0 36.0 23 35.15057785056044 36.0 36.0 36.0 36.0 36.0 24 35.14290442365122 36.0 36.0 36.0 36.0 36.0 25 35.13326816053934 36.0 36.0 36.0 36.0 36.0 26 35.09797537080578 36.0 36.0 36.0 36.0 36.0 27 35.07630382255655 36.0 36.0 36.0 36.0 36.0 28 35.0580509763484 36.0 36.0 36.0 36.0 36.0 29 35.03905010971604 36.0 36.0 36.0 36.0 36.0 30 35.00810196034918 36.0 36.0 36.0 36.0 36.0 31 35.00558815258086 36.0 36.0 36.0 36.0 36.0 32 34.98031998438914 36.0 36.0 36.0 36.0 36.0 33 34.96039509252687 36.0 36.0 36.0 36.0 36.0 34 34.9421250284573 36.0 36.0 36.0 36.0 36.0 35 34.936108342436484 36.0 36.0 36.0 36.0 36.0 36 34.89937116543878 36.0 36.0 36.0 36.0 36.0 37 34.8869379563929 36.0 36.0 36.0 36.0 36.0 38 34.86957661278751 36.0 36.0 36.0 36.0 36.0 39 34.820895979246735 36.0 36.0 36.0 32.0 36.0 40 34.82692031765041 36.0 36.0 36.0 32.0 36.0 41 34.796584358912064 36.0 36.0 36.0 32.0 36.0 42 34.7655137714195 36.0 36.0 36.0 32.0 36.0 43 34.75733720033747 36.0 36.0 36.0 32.0 36.0 44 34.69692355078217 36.0 36.0 36.0 32.0 36.0 45 34.65811831731753 36.0 36.0 36.0 32.0 36.0 46 34.61032727328381 36.0 36.0 36.0 32.0 36.0 47 34.56909814754942 36.0 36.0 36.0 32.0 36.0 48 34.55814758768196 36.0 36.0 36.0 32.0 36.0 49 34.51252982037944 36.0 36.0 36.0 32.0 36.0 50 34.118659761666535 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 1.0 20 10.0 21 14.0 22 32.0 23 127.0 24 262.0 25 551.0 26 1275.0 27 2380.0 28 4244.0 29 6566.0 30 9801.0 31 14575.0 32 21753.0 33 35974.0 34 80640.0 35 344508.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.66748577093405 19.358802117422808 12.595259146983285 25.378452964659857 2 14.938873902313036 20.922152710019322 39.7095792917408 24.429394095926842 3 18.40286811858155 24.73752276588255 29.412372396271753 27.447236719264147 4 11.672010590918134 16.970147997367572 38.163654172852354 33.194187238861936 5 12.858681532695762 38.42567527495968 34.72326113947807 13.992382052866487 6 32.01629195426927 37.756164006183134 17.583870276557644 12.643673762989946 7 28.73259322037141 31.539678561658118 21.08250607886163 18.645222139108842 8 25.90695085065801 35.67885244866686 19.77050503813756 18.643691662537567 9 26.093668992353358 15.336331792015887 19.933692102549582 38.63630711308117 10 14.907444252284241 28.415647622400098 33.2483279511471 23.428580174168566 11 35.14088993386429 22.786691740974494 23.585600511179177 18.48681781398205 12 23.42623963819534 25.223975680727285 30.338254453208545 21.01153022786883 13 28.186213084426825 21.474690700250424 26.32955369390086 24.00954252142189 14 21.706749210369743 21.444272478396368 27.46382814278581 29.385150168448078 15 23.699429706167628 29.544893660574733 23.45531869304953 23.30035794020811 16 23.373145007470665 27.865302241582825 26.12476110125863 22.636791649687876 17 21.68876611065728 27.902883609169848 27.133436512962177 23.274913767210688 18 21.99007868562672 27.488507077497594 28.571319251673483 21.950094985202202 19 23.641271596459244 26.60331769058738 27.717504634474366 22.037906078479015 20 23.750026305166717 26.789373095266793 27.54390093187249 21.916699667694004 21 24.129493622695435 26.095390778496043 27.157732828531145 22.61738277027738 22 23.333071876919075 26.838245844277836 27.376017049509006 22.452665229294087 23 22.739673089578964 26.78166944703776 27.676043404398598 22.80261405898468 24 22.7359165572999 26.873806690567932 27.945537261864224 22.44473949026795 25 22.911469413367207 26.682762209400206 27.996487549549276 22.409280827683315 26 22.067069566165625 27.30744139687131 28.38145744015336 22.24403159680971 27 22.414680387441628 27.29634539927417 27.74420281953125 22.544771393752953 28 22.251662977538086 27.08056329836792 27.73312773695397 22.934645987140023 29 22.46862989300015 26.880054179077923 27.55423168825604 23.097084239665897 30 22.749264884533783 27.09108544557467 27.711700819005674 22.44794885088587 31 23.14399954085439 26.51336305025731 27.576285129421667 22.766352279466627 32 22.410705745059403 27.334659753974478 27.55868454783723 22.695949953128885 33 22.602651933278874 27.014633269117088 27.811820253179086 22.570894544424952 34 22.74243844579212 27.09590403856823 28.05590097759752 22.105756538042126 35 22.948922257529468 27.26390964066323 27.69148653276272 22.095681569044583 36 22.25944256217083 27.213021294668394 27.86921312460184 22.65832301855894 37 23.043399240489375 26.983671478176024 27.11414660276829 22.858782678566303 38 22.516031772754406 27.23813495768224 27.694026538514514 22.55180673104884 39 22.8997995071856 27.16352408209492 27.26759668804236 22.669079722677115 40 23.436761664622843 27.083122095681567 27.53595185120707 21.94416438848852 41 22.780109660114864 26.9482271104598 28.15349355086798 22.118169678557354 42 22.95811483266404 27.71714071985169 27.143187849035087 22.181556598449177 43 22.54459118450027 27.268013920217033 27.82245027195696 22.364944623325737 44 22.37521020702163 27.435483901824952 27.41290876776118 22.77639712339224 45 22.493547936583248 27.748942512067128 27.327860478552747 22.429649072796877 46 22.748908555926704 27.013097328879553 27.056334201897066 23.181659913296677 47 22.91806164029768 27.289893057335807 27.138948939182338 22.653096363184176 48 22.69296626139527 27.554883823262134 26.829221630204998 22.922928285137605 49 22.944961096454392 27.310155097636706 26.900170842715653 22.84471296319325 50 22.446355872539716 27.717407940249167 27.047812911322662 22.788423275888455 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 202.0 1 114.5 2 27.0 3 99.5 4 172.0 5 172.0 6 172.0 7 130.5 8 89.0 9 139.5 10 190.0 11 330.0 12 470.0 13 824.5 14 1179.0 15 1578.0 16 1977.0 17 2141.5 18 2306.0 19 2388.0 20 2470.0 21 2780.5 22 3091.0 23 3452.0 24 3813.0 25 4936.0 26 6059.0 27 7828.0 28 9597.0 29 11485.0 30 13373.0 31 15129.0 32 16885.0 33 19140.5 34 21396.0 35 23840.0 36 26284.0 37 28412.5 38 30541.0 39 31694.0 40 32847.0 41 33849.0 42 34851.0 43 34237.5 44 33624.0 45 34080.5 46 34537.0 47 35003.0 48 35469.0 49 35412.5 50 35356.0 51 33970.0 52 32584.0 53 31167.0 54 29750.0 55 28758.5 56 27767.0 57 25806.5 58 23846.0 59 21127.0 60 18408.0 61 16087.5 62 13767.0 63 11588.0 64 9409.0 65 7821.5 66 6234.0 67 5437.0 68 4640.0 69 4048.5 70 3457.0 71 2821.0 72 2185.0 73 1888.5 74 1592.0 75 1196.5 76 801.0 77 666.0 78 531.0 79 416.0 80 301.0 81 250.0 82 199.0 83 169.5 84 140.0 85 106.5 86 73.0 87 52.0 88 31.0 89 21.0 90 11.0 91 8.0 92 5.0 93 2.5 94 0.0 95 1.0 96 2.0 97 1.5 98 1.0 99 1.5 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.036540128139150925 2 0.004400120142410845 3 1.9130957140916718E-4 4 1.9130957140916718E-4 5 0.0 6 1.9130957140916718E-4 7 0.0 8 0.0 9 0.0 10 1.9130957140916718E-4 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 3.8261914281833437E-4 17 0.0 18 0.0 19 0.0 20 3.8261914281833437E-4 21 0.0 22 0.0 23 1.9130957140916718E-4 24 0.0013391669998641701 25 1.9130957140916718E-4 26 3.8261914281833437E-4 27 3.8261914281833437E-4 28 0.001147857428455003 29 3.8261914281833437E-4 30 0.001147857428455003 31 5.739287142275015E-4 32 5.739287142275015E-4 33 0.0 34 5.739287142275015E-4 35 0.0 36 0.0 37 0.0015304765712733375 38 1.9130957140916718E-4 39 1.9130957140916718E-4 40 0.0 41 0.0013391669998641701 42 0.004208810571001678 43 0.0038261914281833434 44 0.0026783339997283402 45 0.002295714856910006 46 0.002104405285500839 47 5.739287142275015E-4 48 0.003443572285365009 49 0.0019130957140916717 50 0.0017217861426825046 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 522713.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 63.70453455887601 #Duplication Level Percentage of deduplicated Percentage of total 1 76.76738272535802 48.904303858220324 2 14.55576617462309 18.545366186043903 3 4.4527179827484265 8.509749798387775 4 1.717915193072732 4.377559511452802 5 0.7875355913202471 2.5084794146802767 6 0.4292039089780361 1.6405341151377588 7 0.2490074574521437 1.1104032925074554 8 0.16858111500548306 0.8591505173472519 9 0.11436497176354776 0.6557010566432226 >10 0.6777577030730162 8.116348061322277 >50 0.05740819757727851 2.547694807906051 >100 0.02205683066273045 2.104023034834377 >500 3.0214836524285676E-4 0.12068634551651955 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 627 0.11995110127354781 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 14 0.0 0.0 0.0 0.0 0.0 15 0.0 0.0 0.0 0.0 0.0 16 0.0 0.0 0.0 0.0 0.0 17 0.0 0.0 0.0 0.0 0.0 18 0.0 0.0 0.0 0.0 0.0 19 0.0 0.0 0.0 0.0 0.0 20 0.0 0.0 0.0 0.0 0.0 21 0.0 0.0 0.0 0.0 0.0 22 0.0 0.0 0.0 0.0 0.0 23 0.0 0.0 0.0 0.0 0.0 24 0.0 0.0 0.0 3.8261914281833437E-4 0.0 25 0.0 0.0 0.0 0.001147857428455003 0.0 26 0.0 0.0 0.0 0.0017217861426825046 0.0 27 0.0 0.0 0.0 0.002104405285500839 0.0 28 0.0 0.0 0.0 0.003060953142546675 0.0 29 0.0 0.0 0.0 0.005739287142275016 0.0 30 0.0 0.0 0.0 0.00880024028482169 0.0 31 0.0 0.0 0.0 0.018365718855280048 0.0 32 0.0 0.0 0.0 0.03041822185405758 0.0 33 0.0 0.0 0.0 0.03826191428183343 0.0 34 0.0 0.0 0.0 0.04916655985215596 0.0 35 0.0 0.0 0.0 0.06160168199375183 0.0 36 0.0 0.0 0.0 0.07767168599212187 0.0 37 0.0 0.0 0.0 0.10292454941813194 0.0 38 0.0 0.0 0.0 0.13181229470091618 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TACACCG 25 0.0023523776 35.19755 5 TGCGTAG 30 0.0057440214 29.331293 13 GCGGCGT 60 9.715521E-6 25.674704 40 ATACCGT 80 1.307726E-7 24.748278 6 CGTCGTA 55 1.5926825E-4 23.998333 10 CCTATAC 50 0.0025795382 21.99847 3 GAGCCGC 75 5.4679484E-5 20.531906 6 TACCGTC 75 5.4679484E-5 20.531906 7 GTATCAA 1045 0.0 20.004349 1 TAATCGT 55 0.00447463 20.004349 38 AACCGTC 55 0.00448207 19.99861 34 TACACGG 55 0.00448207 19.99861 5 TAGACAG 90 1.00077905E-5 19.554193 5 GGTATCA 565 0.0 19.47326 1 CGGCGTT 80 8.954579E-5 19.256027 41 CGCAATA 80 8.974343E-5 19.250502 36 CGCCGGT 80 8.980939E-5 19.24866 7 GTATTAG 115 2.0113112E-7 19.134594 1 GCATAGA 70 8.103043E-4 18.861244 1 CGACCAT 70 8.118698E-4 18.855831 21 >>END_MODULE