##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062227_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 179450 Sequences flagged as poor quality 0 Sequence length 50 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.138222346057397 32.0 32.0 32.0 32.0 32.0 2 31.449646140986346 32.0 32.0 32.0 32.0 32.0 3 31.5871886319309 32.0 32.0 32.0 32.0 32.0 4 31.694973530231263 32.0 32.0 32.0 32.0 32.0 5 31.680724435775982 32.0 32.0 32.0 32.0 32.0 6 35.33141822234606 36.0 36.0 36.0 36.0 36.0 7 35.32766787405963 36.0 36.0 36.0 36.0 36.0 8 35.296734466425185 36.0 36.0 36.0 36.0 36.0 9 35.32480356645305 36.0 36.0 36.0 36.0 36.0 10 35.25949846753971 36.0 36.0 36.0 36.0 36.0 11 35.35989412092505 36.0 36.0 36.0 36.0 36.0 12 35.292343271106155 36.0 36.0 36.0 36.0 36.0 13 35.30264140429089 36.0 36.0 36.0 36.0 36.0 14 35.27721928113681 36.0 36.0 36.0 36.0 36.0 15 35.26478127612148 36.0 36.0 36.0 36.0 36.0 16 35.26701588186124 36.0 36.0 36.0 36.0 36.0 17 35.27215380328782 36.0 36.0 36.0 36.0 36.0 18 35.26097520200613 36.0 36.0 36.0 36.0 36.0 19 35.20063527444971 36.0 36.0 36.0 36.0 36.0 20 35.16382279186403 36.0 36.0 36.0 36.0 36.0 21 35.12439676790192 36.0 36.0 36.0 36.0 36.0 22 35.11122875452772 36.0 36.0 36.0 36.0 36.0 23 35.108002229033154 36.0 36.0 36.0 36.0 36.0 24 35.088966285873504 36.0 36.0 36.0 36.0 36.0 25 35.065299526330456 36.0 36.0 36.0 36.0 36.0 26 35.04211758149903 36.0 36.0 36.0 36.0 36.0 27 35.02554471997771 36.0 36.0 36.0 36.0 36.0 28 34.94528838116467 36.0 36.0 36.0 36.0 36.0 29 34.914276957369744 36.0 36.0 36.0 36.0 36.0 30 34.83504040122597 36.0 36.0 36.0 32.0 36.0 31 34.85465589300641 36.0 36.0 36.0 32.0 36.0 32 34.81306213429925 36.0 36.0 36.0 32.0 36.0 33 34.77958762886598 36.0 36.0 36.0 32.0 36.0 34 34.73830593480078 36.0 36.0 36.0 32.0 36.0 35 34.72305377542491 36.0 36.0 36.0 32.0 36.0 36 34.66030649205907 36.0 36.0 36.0 32.0 36.0 37 34.566352744497074 36.0 36.0 36.0 32.0 36.0 38 34.53431039286709 36.0 36.0 36.0 32.0 36.0 39 34.373491223181944 36.0 36.0 36.0 32.0 36.0 40 34.433591529674004 36.0 36.0 36.0 32.0 36.0 41 34.37826135413764 36.0 36.0 36.0 32.0 36.0 42 34.38473112287545 36.0 36.0 36.0 32.0 36.0 43 34.392098077458904 36.0 36.0 36.0 32.0 36.0 44 34.233390916689885 36.0 36.0 36.0 32.0 36.0 45 34.17364725550293 36.0 36.0 36.0 32.0 36.0 46 33.9605015324603 36.0 36.0 36.0 32.0 36.0 47 33.95310671496239 36.0 36.0 36.0 32.0 36.0 48 33.820234048481474 36.0 36.0 36.0 32.0 36.0 49 33.7629200334355 36.0 36.0 36.0 32.0 36.0 50 33.46027862914461 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 2.0 20 1.0 21 10.0 22 17.0 23 44.0 24 105.0 25 251.0 26 553.0 27 1086.0 28 1980.0 29 2914.0 30 4283.0 31 6222.0 32 8902.0 33 14150.0 34 29434.0 35 109496.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.96695578496734 20.170460879841244 12.879328413119579 23.983254922071843 2 13.15221934297417 21.360305386051436 44.230265540973555 21.257209730000838 3 20.36890498746169 24.991919754806354 30.360546113123434 24.278629144608527 4 10.928949568124825 17.06603510727222 39.09612705488994 32.90888826971301 5 11.244357759821677 40.38729451100585 35.09556979660072 13.272777932571747 6 29.5358038450822 40.14321538032878 17.79381443298969 12.52716634159933 7 26.191139593201452 33.01365282808582 20.356645305098915 20.43856227361382 8 24.123711340206185 39.952633045416555 19.320144887155198 16.60351072722207 9 26.266369462245752 14.20618556701031 20.24407913067707 39.28336584006687 10 15.316244079130678 29.067149623850653 32.72945110058512 22.887155196433547 11 35.74421844524937 21.511284480356647 25.08721092226247 17.657286152131512 12 23.546949010866534 25.05823349122318 33.223739203120644 18.171078294789638 13 31.121203677904706 21.597102256896072 26.49205906937866 20.789634995820563 14 20.0261911395932 23.774310392867093 27.196433546949013 29.003064920590692 15 23.705767623293397 33.174700473669546 23.081638339370297 20.03789356366676 16 20.421844524937306 27.761493452215102 31.164112566174424 20.65254945667317 17 19.278907773753133 28.615213151295627 29.553636110337138 22.5522429646141 18 19.129562552242966 27.84675397046531 33.80105879074951 19.22262468654221 19 24.69545834494288 24.51992198383951 27.66731680133742 23.11730286988019 20 23.3006408470326 28.229590415157425 28.87489551407077 19.594873223739203 21 23.623293396489274 24.738367233212593 27.760936193925883 23.877403176372248 22 22.832543884090274 28.818055168570634 28.27807188631931 20.07132906101978 23 22.985789913624966 28.005572582892167 28.425745332961828 20.582892170521035 24 23.359710225689607 27.583728057954858 28.92114795207579 20.135413764279743 25 22.954154105066063 27.919353130973146 29.696459718360092 19.4300330456007 26 18.59414095369715 29.0862584912705 32.73297705754838 19.586623497483966 27 20.410813100100864 28.312779675562417 31.264036021376544 20.01237120296017 28 19.67656188178125 29.652209287421915 28.446282189170063 22.224946641626776 29 20.634274919336413 26.82321996779029 27.661898366666854 24.880606746206443 30 19.998439668095113 28.4504232400292 29.440676738237602 22.110460353638082 31 22.685933372713794 26.33828561238478 28.984206948051224 21.991574066850195 32 20.345169631313805 28.996143729659845 29.712785876688514 20.945900762337835 33 21.266209340815497 28.016316613633958 30.761943504839817 19.955530540710733 34 20.63817574909863 28.61983070398832 31.48582605642829 19.256167490484764 35 20.166062970186683 29.65394260239621 30.140986347171918 20.039008080245193 36 19.19263969150009 29.16427508651483 30.156757630301644 21.486327591683434 37 21.1639091207989 27.291623710622076 27.846662245676995 23.697804922902026 38 21.41376427974366 29.67901922541098 27.932571747004737 20.974644747840625 39 22.667848067406716 25.9924880745397 29.918416477196736 21.42124738085685 40 24.157704095848427 28.207300083588745 28.73780997492338 18.897185845639452 41 22.821525893150703 26.221934923014338 31.803465051351637 19.153074132483326 42 21.40727489564699 30.821058967114173 28.87109268330742 18.90057345393142 43 19.743764071242282 29.766389514277435 30.12026035977798 20.369586054702303 44 19.387106841131498 30.225028421123024 29.33004168431377 21.05782305343171 45 19.562988308460483 30.285434058156774 29.36315103150808 20.78842660187466 46 21.16215176964273 27.423192880190367 28.103074513912496 23.311580836254407 47 22.829454772413175 28.43776470063751 27.539454326601575 21.193326200347734 48 20.827226473030432 28.45861917154751 26.773404367960858 23.9407499874612 49 22.67628160474357 28.02338346995982 28.082455152889775 21.217879772406835 50 20.41015352893644 30.68015269302572 26.16233386274346 22.74735991529438 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 491.0 1 266.0 2 41.0 3 102.5 4 164.0 5 159.5 6 155.0 7 107.5 8 60.0 9 102.0 10 144.0 11 222.5 12 301.0 13 585.5 14 870.0 15 1107.5 16 1345.0 17 1449.5 18 1554.0 19 1452.0 20 1350.0 21 1460.5 22 1571.0 23 1569.5 24 1568.0 25 2116.0 26 2664.0 27 3910.5 28 5157.0 29 6114.0 30 7071.0 31 7506.0 32 7941.0 33 9371.5 34 10802.0 35 12582.0 36 14362.0 37 14720.5 38 15079.0 39 13786.0 40 12493.0 41 11579.5 42 10666.0 43 9373.0 44 8080.0 45 7770.5 46 7461.0 47 7805.0 48 8149.0 49 8212.5 50 8276.0 51 8894.0 52 9512.0 53 8783.5 54 8055.0 55 7375.0 56 6695.0 57 6192.5 58 5690.0 59 5316.5 60 4943.0 61 4644.5 62 4346.0 63 3697.0 64 3048.0 65 2841.5 66 2635.0 67 2481.5 68 2328.0 69 2290.0 70 2252.0 71 1682.5 72 1113.0 73 846.5 74 580.0 75 405.5 76 231.0 77 171.0 78 111.0 79 77.0 80 43.0 81 32.5 82 22.0 83 18.5 84 15.0 85 12.0 86 9.0 87 5.5 88 2.0 89 1.5 90 1.0 91 1.0 92 1.0 93 2.0 94 3.0 95 1.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.030091947617720816 2 0.0027862914460852605 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 5.572582892170521E-4 26 5.572582892170521E-4 27 5.572582892170521E-4 28 0.0016717748676511562 29 5.572582892170521E-4 30 5.572582892170521E-4 31 0.0022290331568682086 32 0.0011145165784341043 33 5.572582892170521E-4 34 5.572582892170521E-4 35 0.0 36 5.572582892170521E-4 37 0.0016717748676511562 38 0.0 39 0.0011145165784341043 40 0.0 41 5.572582892170521E-4 42 0.006129841181387573 43 0.0033435497353023124 44 0.0033435497353023124 45 0.0022290331568682086 46 0.0039008080245193644 47 0.0011145165784341043 48 0.0039008080245193644 49 0.0039008080245193644 50 0.0027862914460852605 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 179450.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 49.33296182780719 #Duplication Level Percentage of deduplicated Percentage of total 1 71.76938369781311 35.40596266369462 2 14.963627326947407 14.764001114516578 3 5.358756551599494 7.930899972137086 4 2.5099403578528827 4.952911674561159 5 1.408593891198265 3.4745054332683196 6 0.806524489427074 2.387294511005851 7 0.5806072654979215 2.0050153246029536 8 0.3637267305259353 1.435497353023126 9 0.35130128320983195 1.559765951518529 >10 1.6842129043918308 15.48230704931736 >50 0.13780950659678295 4.77514628030092 >100 0.06325682270016265 5.242685984954027 >500 0.0022591722392915235 0.5840066870994706 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 540 0.30091947617720816 No Hit GATATACACTGTTCTACAAATCCCGTTTCCAACGAATGTGTTTTTCAGTG 508 0.28308721092226247 No Hit GTGTATATCAATGAGTTACAATGAGAAACATGGAAAATGATAAAAACCAC 488 0.2719420451379214 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 316 0.17609361939258847 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 310 0.17275006965728615 No Hit GTCCTACAGTGTGCATTTCTCATTTTTCACGTTTTTCAGTGATTTCGTCA 295 0.16439119531903038 No Hit TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 283 0.15770409584842576 No Hit ATGTAGGCAAGGGAAGTCGGCAAAATGGATCCGTAACTTCGGGAAAAGGA 282 0.1571468375592087 No Hit TTGTAGAACAGTGTATATCAATGAGTTACAATGAGAAACATGGAAAATGA 276 0.1538032878239064 No Hit GTGTATATCAATGAGTTACAATGAAAAACATGGAAAATGATAAAAACCAC 248 0.1382000557258289 No Hit CCATAGGGTCTTCTCGTCTTATTATTATATTTCAGCCTCTTCACTGAAAG 240 0.1337419894120925 No Hit GCGTTAGCATCCGCGAGGACCATCGCAATGCTTTGTTTTAATTAAACAGT 234 0.13039843967679018 No Hit GTCCTACAGTGGACATTTCTAAATTTTCCACCTTTTTCAGTTTTCCTCGC 218 0.12148230704931737 No Hit CTGTAGGACGTGGAATATGGCAAGAAAACTGAAAATCATGGAAAATGAGA 209 0.1164669824463639 No Hit TTGTAGAACAGTGTATATCAATGAGTTACAATGAAAAACATGGAAAATGA 203 0.11312343271106158 No Hit CCCCTTGTCCGTACCAGTTCTGAGTTGGCTGTTCGACGCCCGGGGAAAGC 202 0.11256617442184454 No Hit GTTCTACAAATCCCGTTTCCAACGAATGTGTTTTTCAGTGTAACTCACTC 189 0.10532181666202285 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 188 0.1047645583728058 No Hit TGCCTACATTGTTCCATCGACCAGAGGCTGTTCACCTTGGAGACCTGATG 188 0.1047645583728058 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 14 0.0 0.0 0.0 0.0 0.0 15 0.0 0.0 0.0 0.0 0.0 16 0.0 0.0 0.0 0.0 0.0 17 0.0 0.0 0.0 0.0 0.0 18 0.0 0.0 0.0 0.0 0.0 19 0.0 0.0 0.0 0.0 0.0 20 0.0 0.0 0.0 0.0 0.0 21 0.0 0.0 0.0 0.0 0.0 22 0.0 0.0 0.0 5.572582892170521E-4 0.0 23 0.0 0.0 0.0 5.572582892170521E-4 0.0 24 0.0 0.0 0.0 0.0011145165784341043 0.0 25 0.0 0.0 0.0 0.0033435497353023124 0.0 26 0.0 0.0 0.0 0.006129841181387573 0.0 27 0.0 0.0 0.0 0.006129841181387573 0.0 28 0.0 0.0 0.0 0.006129841181387573 0.0 29 0.0 0.0 0.0 0.008358874338255782 0.0 30 0.0 0.0 0.0 0.017275006965728614 0.0 31 0.0 0.0 0.0 0.0267483978824185 0.0 32 0.0 0.0 0.0 0.03677904708832544 0.0 33 0.0 0.0 0.0 0.042908888269713015 0.0 34 0.0 0.0 0.0 0.05684034550013931 0.0 35 0.0 0.0 0.0 0.07467261075508498 0.0 36 0.0 0.0 0.0 0.09640568403455001 0.0 37 0.0 0.0 0.0 0.1270548899414879 0.0 38 0.0 0.0 0.0 0.1476734466425188 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAACGTG 20 7.8392006E-4 43.999443 41 GCTAACG 30 1.2968195E-4 36.666206 39 CGGCGCA 25 0.0023476204 35.199554 33 CTTTTAG 25 0.0023476204 35.199554 16 TGCGCCG 25 0.0023476204 35.199554 5 TAGGACC 295 0.0 29.830132 4 TGGGTCT 30 0.0057325074 29.332964 24 TAACCGG 30 0.0057325074 29.332964 44 TAACAGT 30 0.0057325074 29.332964 6 CGGGAAA 60 2.9221337E-7 29.332964 40 ACCGTCA 30 0.0057325074 29.332964 8 CGCAATA 30 0.0057325074 29.332964 36 TCAAGGT 30 0.0057325074 29.332964 3 TGAGCGA 30 0.0057325074 29.332964 28 CAATACG 30 0.0057325074 29.332964 38 AGGACCT 355 0.0 28.506681 5 CTTCGGG 80 4.263711E-9 27.499653 37 TGCTAAC 40 7.009182E-4 27.499653 38 TCGGGAA 65 5.884649E-7 27.07658 39 GGACCTG 375 0.0 26.986324 6 >>END_MODULE