##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062224_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 945878 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.265472925683863 32.0 32.0 32.0 32.0 32.0 2 31.451060284730165 32.0 32.0 32.0 32.0 32.0 3 31.57083577374672 32.0 32.0 32.0 32.0 32.0 4 31.65235474342357 32.0 32.0 32.0 32.0 32.0 5 31.620737558120602 32.0 32.0 32.0 32.0 32.0 6 35.26525090973677 36.0 36.0 36.0 36.0 36.0 7 35.26736429010929 36.0 36.0 36.0 36.0 36.0 8 35.221399588530446 36.0 36.0 36.0 36.0 36.0 9 35.29186850735507 36.0 36.0 36.0 36.0 36.0 10 35.18141874533502 36.0 36.0 36.0 36.0 36.0 11 35.29843489329491 36.0 36.0 36.0 36.0 36.0 12 35.231283527051055 36.0 36.0 36.0 36.0 36.0 13 35.25575179885778 36.0 36.0 36.0 36.0 36.0 14 35.22896716066977 36.0 36.0 36.0 36.0 36.0 15 35.200063856015255 36.0 36.0 36.0 36.0 36.0 16 35.21730920901004 36.0 36.0 36.0 36.0 36.0 17 35.19631707260344 36.0 36.0 36.0 36.0 36.0 18 35.19826869850023 36.0 36.0 36.0 36.0 36.0 19 35.18407130729333 36.0 36.0 36.0 36.0 36.0 20 35.16816756495024 36.0 36.0 36.0 36.0 36.0 21 35.160210936294106 36.0 36.0 36.0 36.0 36.0 22 35.14902027534206 36.0 36.0 36.0 36.0 36.0 23 35.122421707662085 36.0 36.0 36.0 36.0 36.0 24 35.117647307580896 36.0 36.0 36.0 36.0 36.0 25 35.08857379070028 36.0 36.0 36.0 36.0 36.0 26 35.053683456005956 36.0 36.0 36.0 36.0 36.0 27 35.04888368267366 36.0 36.0 36.0 36.0 36.0 28 35.02827531668989 36.0 36.0 36.0 36.0 36.0 29 35.00344441883625 36.0 36.0 36.0 36.0 36.0 30 34.98141197913473 36.0 36.0 36.0 36.0 36.0 31 34.979537530210024 36.0 36.0 36.0 36.0 36.0 32 34.947927745438626 36.0 36.0 36.0 36.0 36.0 33 34.92747056174264 36.0 36.0 36.0 36.0 36.0 34 34.91043876694457 36.0 36.0 36.0 36.0 36.0 35 34.89225671809684 36.0 36.0 36.0 32.0 36.0 36 34.871728700741535 36.0 36.0 36.0 32.0 36.0 37 34.86266199234996 36.0 36.0 36.0 32.0 36.0 38 34.83775814639943 36.0 36.0 36.0 32.0 36.0 39 34.81292090523302 36.0 36.0 36.0 32.0 36.0 40 34.79661541974758 36.0 36.0 36.0 32.0 36.0 41 34.77212177468976 36.0 36.0 36.0 32.0 36.0 42 34.749429630459744 36.0 36.0 36.0 32.0 36.0 43 34.72755577357756 36.0 36.0 36.0 32.0 36.0 44 34.67905903298311 36.0 36.0 36.0 32.0 36.0 45 34.66142673790912 36.0 36.0 36.0 32.0 36.0 46 34.615871180004184 36.0 36.0 36.0 32.0 36.0 47 34.584797405162185 36.0 36.0 36.0 32.0 36.0 48 34.55316964767126 36.0 36.0 36.0 32.0 36.0 49 34.51622936573216 36.0 36.0 36.0 32.0 36.0 50 34.11639978940202 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 1.0 18 0.0 19 5.0 20 2.0 21 18.0 22 63.0 23 179.0 24 423.0 25 1029.0 26 2232.0 27 4285.0 28 7620.0 29 12317.0 30 18179.0 31 27129.0 32 40365.0 33 67686.0 34 152671.0 35 611674.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.06091531607752 17.623668138434287 12.280781535044815 26.03463501044338 2 15.804141979302791 19.778331789712293 38.090857957260724 26.326668273724184 3 19.289270335446727 23.107964811343596 28.115508107325194 29.487256745884487 4 12.482265154702826 15.74611102066017 35.72944925244059 36.042174572196416 5 14.434102495247803 36.920934835147875 33.271309830654694 15.373652838949631 6 34.996410738394104 35.12909183752221 16.3618525453098 13.512644878773877 7 30.461222271794036 30.286992614269494 19.767559875586493 19.48422523834998 8 27.48398842133975 34.09636337878669 18.88531079060936 19.534337409264197 9 26.761802262025334 14.852126807051228 18.355855617743515 40.03021531317992 10 15.72096583382406 27.420584283157325 31.608020916038765 25.25042896697985 11 37.21145856019486 21.567580597074887 21.859055819037973 19.361905023692273 12 24.52240140906121 23.601986725560803 29.038100050957944 22.83751181442004 13 29.612909910157548 19.940097983037983 25.09900854021343 25.347983566591044 14 23.190517170290462 19.535183184300724 25.656162845525532 31.618136799883285 15 24.82550603777654 27.532726207819614 22.52647804473727 25.115289709666573 16 25.101150370717296 26.328698794441934 24.380754628812234 24.18939620602853 17 23.72853581540114 26.39156423978568 25.48838222265451 24.39151772215867 18 24.024582477425714 26.041758072138343 26.53389394181273 23.39976550862321 19 25.153878195708113 25.224183245619415 25.777531563267143 23.844406995405325 20 25.163340649302867 25.120206031234538 25.734240006089593 23.982213313373 21 25.687879409395293 24.703080101239273 25.42907224821806 24.179968241147378 22 25.020245739936865 25.00343596108589 25.84815377881714 24.128164520160105 23 24.29499364611504 25.00364740484502 25.971002602872673 24.730356346167266 24 24.442494436309623 25.14682327816337 26.022106748848937 24.38857553667807 25 24.6202185705692 24.830923390349444 26.19749162942594 24.35136640965542 26 23.95593916314435 25.835787853350446 26.23192941131694 23.97634357218826 27 24.28285826955627 25.296842176486695 26.16133455548472 24.258964998472308 28 24.22349019471025 25.592075841529514 25.829424221375735 24.3550097423845 29 24.20546944462946 25.230342762717616 25.87472102491561 24.68946676773732 30 24.17945478477373 25.59805046174666 25.89333572972887 24.329159023750748 31 24.603699858543525 25.261821341954636 25.712409898147108 24.422068901354727 32 24.380122912906913 25.518224962547826 25.56072538279452 24.54092674175074 33 24.114048775949488 25.13246979519514 26.065995965644547 24.687485463210823 34 24.622412710361 25.3576057699017 26.008855302080402 24.011126217656898 35 24.648976558262863 25.29842675104691 26.18374270650412 23.868853984186106 36 24.10638581296954 25.647916538919397 25.797724442264226 24.447973205846843 37 24.53212188618684 25.479824837767715 25.655113937915097 24.33293933813035 38 24.143705636456286 25.522636111633844 25.8188688181774 24.514789433732467 39 24.8326404952911 25.187552597191154 25.621334055068996 24.358472852448756 40 25.349146507266262 25.237187036806013 25.512381089315962 23.901285366611763 41 24.165371562688318 25.549599839301386 26.226648482349585 24.058380115660714 42 24.958898750839207 25.843936838877816 25.556360253109684 23.640804157173292 43 24.391097446611003 25.320534846766 25.936811789719417 24.351555916903582 44 24.010297724773746 25.66966928867462 25.69842679522964 24.621606191321998 45 24.24015917856418 25.91758153460992 25.617007240002703 24.225252046823194 46 24.283166342623282 25.49719250502981 25.382270756485358 24.837370395861548 47 24.444082637236235 25.585149740608898 25.706413890295593 24.264353731859277 48 24.64026761340689 25.588523241725365 25.258658422865555 24.512550722002192 49 24.304247938620094 25.774676031112854 25.35558076517661 24.56549526509044 50 24.62904404107554 25.93091840607612 25.156602355299423 24.283435197548915 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 178.0 1 117.0 2 56.0 3 137.0 4 218.0 5 224.5 6 231.0 7 178.5 8 126.0 9 203.5 10 281.0 11 442.5 12 604.0 13 1137.0 14 1670.0 15 2287.5 16 2905.0 17 2942.0 18 2979.0 19 2910.0 20 2841.0 21 3073.0 22 3305.0 23 3735.0 24 4165.0 25 5127.5 26 6090.0 27 8133.5 28 10177.0 29 12233.0 30 14289.0 31 16490.0 32 18691.0 33 21599.0 34 24507.0 35 28063.5 36 31620.0 37 35286.5 38 38953.0 39 41650.0 40 44347.0 41 46972.0 42 49597.0 43 51874.0 44 54151.0 45 57956.5 46 61762.0 47 64446.5 48 67131.0 49 69095.0 50 71059.0 51 70350.0 52 69641.0 53 68244.5 54 66848.0 55 66158.0 56 65468.0 57 62009.5 58 58551.0 59 54056.5 60 49562.0 61 43724.0 62 37886.0 63 32470.0 64 27054.0 65 22883.5 66 18713.0 67 16088.5 68 13464.0 69 11847.5 70 10231.0 71 8068.0 72 5905.0 73 5157.0 74 4409.0 75 3365.0 76 2321.0 77 1932.5 78 1544.0 79 1314.0 80 1084.0 81 841.0 82 598.0 83 475.5 84 353.0 85 263.0 86 173.0 87 123.5 88 74.0 89 47.0 90 20.0 91 16.5 92 13.0 93 10.5 94 8.0 95 8.0 96 8.0 97 8.5 98 9.0 99 8.5 100 8.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.03203372950845669 2 0.005286093978293184 3 5.286093978293184E-4 4 0.0 5 0.0 6 1.0572187956586368E-4 7 0.0 8 0.0 9 0.0 10 1.0572187956586368E-4 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 9.514969160927731E-4 17 0.0 18 1.0572187956586368E-4 19 0.0 20 2.1144375913172736E-4 21 0.0 22 0.0 23 0.0 24 0.0013743844343562278 25 5.286093978293184E-4 26 4.228875182634547E-4 27 5.286093978293184E-4 28 0.0011629406752245003 29 5.286093978293184E-4 30 0.0013743844343562278 31 4.228875182634547E-4 32 5.286093978293184E-4 33 2.1144375913172736E-4 34 4.228875182634547E-4 35 1.0572187956586368E-4 36 0.0 37 0.001268662554790364 38 0.0 39 0.0010572187956586368 40 0.0 41 8.457750365269094E-4 42 0.004546040821332138 43 0.003911709543936956 44 0.00401743142350282 45 0.0023258813504490007 46 0.0017972719526196824 47 9.514969160927731E-4 48 0.0038059876643710923 49 0.003277378266541774 50 0.0011629406752245003 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 945878.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 55.70681716927639 #Duplication Level Percentage of deduplicated Percentage of total 1 70.00648387761552 38.99838398034223 2 16.536690408372003 18.424127783282117 3 6.256407618034662 10.45573665942975 4 2.8526855329756398 6.356561257076549 5 1.4565562560222953 4.057005652549988 6 0.8626210150560145 2.8832322703260607 7 0.534311245744611 2.0835345214728345 8 0.31979532148438994 1.42518236044167 9 0.24154329540553393 1.211004737605854 >10 0.8412454758128001 7.83300913316841 >50 0.055954900884996155 2.211227880302528 >100 0.03398662774540365 3.4792867466265776 >500 0.0015274887521285045 0.4635361458624632 >1k 1.9093609401606306E-4 0.11817087151289507 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1111 0.11745700819767455 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 5.286093978293184E-4 2 0.0 0.0 0.0 0.0 5.286093978293184E-4 3 0.0 0.0 0.0 0.0 5.286093978293184E-4 4 0.0 0.0 0.0 0.0 5.286093978293184E-4 5 0.0 0.0 0.0 0.0 6.34331277395182E-4 6 0.0 0.0 0.0 0.0 7.400531569610457E-4 7 0.0 0.0 0.0 0.0 7.400531569610457E-4 8 0.0 0.0 0.0 0.0 7.400531569610457E-4 9 0.0 0.0 0.0 0.0 7.400531569610457E-4 10 0.0 0.0 0.0 0.0 7.400531569610457E-4 11 0.0 0.0 0.0 0.0 7.400531569610457E-4 12 0.0 0.0 0.0 0.0 0.0013743844343562278 13 0.0 0.0 0.0 0.0 0.0014801063139220914 14 0.0 0.0 0.0 0.0 0.0014801063139220914 15 0.0 0.0 0.0 0.0 0.0016915500730538189 16 0.0 0.0 0.0 1.0572187956586368E-4 0.00200871571175141 17 0.0 0.0 0.0 1.0572187956586368E-4 0.0021144375913172736 18 0.0 0.0 0.0 1.0572187956586368E-4 0.0022201594708831374 19 0.0 0.0 0.0 1.0572187956586368E-4 0.0023258813504490007 20 0.0 0.0 0.0 1.0572187956586368E-4 0.0029602126278441827 21 0.0 0.0 0.0 1.0572187956586368E-4 0.00317165638697591 22 0.0 0.0 0.0 3.17165638697591E-4 0.00317165638697591 23 0.0 0.0 0.0 7.400531569610457E-4 0.00317165638697591 24 0.0 0.0 0.0 9.514969160927731E-4 0.00317165638697591 25 0.0 0.0 0.0 0.0010572187956586368 0.00317165638697591 26 0.0 0.0 0.0 0.0011629406752245003 0.003277378266541774 27 0.0 0.0 0.0 0.0014801063139220914 0.003277378266541774 28 0.0 0.0 0.0 0.00200871571175141 0.003277378266541774 29 0.0 0.0 0.0 0.002537325109580728 0.0033831001461076377 30 0.0 0.0 0.0 0.005074650219161456 0.0033831001461076377 31 0.0 0.0 0.0 0.011312241113547413 0.0033831001461076377 32 0.0 0.0 0.0 0.018184163285328552 0.0034888220256735014 33 0.0 0.0 0.0 0.024844641697977964 0.0035945439052393648 34 0.0 0.0 0.0 0.031187954471929784 0.0038059876643710923 35 0.0 0.0 0.0 0.039857148596330605 0.0038059876643710923 36 0.0 0.0 0.0 0.051909442866839066 0.0038059876643710923 37 0.0 0.0 0.0 0.06882494359737726 0.0038059876643710923 38 0.0 0.0 0.0 0.09229520086099899 0.00401743142350282 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 1630 0.0 24.166302 1 GATATAC 365 0.0 23.51346 1 TAGGACG 230 0.0 21.04272 4 GTCCTAC 325 0.0 20.313402 1 CGATTAA 55 0.0044838376 19.99928 27 AACGACT 55 0.0044838376 19.99928 18 GTAGGAC 395 0.0 19.49297 3 AATCCCG 295 0.0 19.389132 19 GTCCTAA 140 4.0636223E-9 18.862448 1 GTACTAG 70 8.1061956E-4 18.862448 1 GGAATAT 490 0.0 18.856462 12 TACACCG 70 8.123505E-4 18.856462 5 AACGCAG 2130 0.0 18.69416 6 CAACGTA 95 1.5970068E-5 18.525648 20 TGTAGGA 505 0.0 18.296371 2 ATCAACG 2235 0.0 17.914345 3 ATACACT 505 0.0 17.860743 4 GGACGTG 285 0.0 17.753746 6 ATCCCGT 315 0.0 17.459688 20 TCCCGTT 290 0.0 17.447647 21 >>END_MODULE