##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062222_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1101199 Sequences flagged as poor quality 0 Sequence length 50 %GC 41 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.308081463931586 32.0 32.0 32.0 32.0 32.0 2 31.553631087569094 32.0 32.0 32.0 32.0 32.0 3 31.641528007199426 32.0 32.0 32.0 32.0 32.0 4 31.702279969378832 32.0 32.0 32.0 32.0 32.0 5 31.701968490708765 32.0 32.0 32.0 32.0 32.0 6 35.35420845823507 36.0 36.0 36.0 36.0 36.0 7 35.35339207536512 36.0 36.0 36.0 36.0 36.0 8 35.31678561277299 36.0 36.0 36.0 36.0 36.0 9 35.37576223734312 36.0 36.0 36.0 36.0 36.0 10 35.28655492785591 36.0 36.0 36.0 36.0 36.0 11 35.381929151770024 36.0 36.0 36.0 36.0 36.0 12 35.31288895104336 36.0 36.0 36.0 36.0 36.0 13 35.336770193216665 36.0 36.0 36.0 36.0 36.0 14 35.31059690392018 36.0 36.0 36.0 36.0 36.0 15 35.30497939064601 36.0 36.0 36.0 36.0 36.0 16 35.318588193414634 36.0 36.0 36.0 36.0 36.0 17 35.30678651179306 36.0 36.0 36.0 36.0 36.0 18 35.304677901087814 36.0 36.0 36.0 36.0 36.0 19 35.27064045644793 36.0 36.0 36.0 36.0 36.0 20 35.26262918872974 36.0 36.0 36.0 36.0 36.0 21 35.23993937517197 36.0 36.0 36.0 36.0 36.0 22 35.202973304552586 36.0 36.0 36.0 36.0 36.0 23 35.205605889580355 36.0 36.0 36.0 36.0 36.0 24 35.18289064919238 36.0 36.0 36.0 36.0 36.0 25 35.143202999639485 36.0 36.0 36.0 36.0 36.0 26 35.13388315826658 36.0 36.0 36.0 36.0 36.0 27 35.07479029675835 36.0 36.0 36.0 36.0 36.0 28 35.03132585481825 36.0 36.0 36.0 36.0 36.0 29 34.99992281140829 36.0 36.0 36.0 36.0 36.0 30 34.94834539442916 36.0 36.0 36.0 36.0 36.0 31 34.95252538369541 36.0 36.0 36.0 36.0 36.0 32 34.91387569367571 36.0 36.0 36.0 36.0 36.0 33 34.94219573392275 36.0 36.0 36.0 36.0 36.0 34 34.919432364177595 36.0 36.0 36.0 36.0 36.0 35 34.908316298870595 36.0 36.0 36.0 36.0 36.0 36 34.84770963286382 36.0 36.0 36.0 36.0 36.0 37 34.74300376226277 36.0 36.0 36.0 32.0 36.0 38 34.728518641952995 36.0 36.0 36.0 32.0 36.0 39 34.53991876127748 36.0 36.0 36.0 32.0 36.0 40 34.63057903249095 36.0 36.0 36.0 32.0 36.0 41 34.604467494067826 36.0 36.0 36.0 32.0 36.0 42 34.598050851844214 36.0 36.0 36.0 32.0 36.0 43 34.60140537722973 36.0 36.0 36.0 32.0 36.0 44 34.4789288766154 36.0 36.0 36.0 32.0 36.0 45 34.45028282808103 36.0 36.0 36.0 32.0 36.0 46 34.292300483382206 36.0 36.0 36.0 32.0 36.0 47 34.30258381999984 36.0 36.0 36.0 32.0 36.0 48 34.25814407750098 36.0 36.0 36.0 32.0 36.0 49 34.19496566923871 36.0 36.0 36.0 32.0 36.0 50 33.881668072709836 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 2.0 20 8.0 21 23.0 22 69.0 23 185.0 24 504.0 25 1191.0 26 2591.0 27 5182.0 28 9210.0 29 14857.0 30 22454.0 31 32808.0 32 48991.0 33 79966.0 34 172739.0 35 710419.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.63745635167199 21.264502508984016 13.328409838269545 24.769631301074448 2 12.48840966531745 21.62654284269021 44.65555023780052 21.229497254191816 3 17.34710742300658 27.820791537943222 30.091591157993385 24.740509881056813 4 10.27526384900808 17.78790008699616 40.611497659821396 31.325338404174364 5 10.767899353341221 41.09466136456717 35.53281468653713 12.604624595554482 6 29.307108537346178 40.148038906753285 18.83405058313817 11.710801972762367 7 27.269730539166854 33.00656829510379 22.532984501438886 17.19071666429047 8 24.10654205098261 39.79516872063996 20.169833063778665 15.92845616459877 9 27.116352266938126 14.774986174161073 21.465148442742866 36.64351311615793 10 15.432556179724264 29.05699065926382 33.61202980753688 21.89842335347503 11 33.40195550486334 22.516003011263177 26.922200256266127 17.159841227607362 12 24.976866125014645 25.509558217906118 32.019734852646984 17.49384080443226 13 28.793342529370257 23.329934008294593 26.815589189601518 21.06113427273363 14 19.870886188599883 24.977501795769882 27.72450755948743 27.427104456142803 15 20.757011221405033 36.34956079691318 23.135237136975242 19.75819084470654 16 19.774081587803785 29.033667092265304 31.4158994691217 19.776351850809213 17 19.072302099802123 31.792346342486688 29.153586227375794 19.98176533033539 18 19.507391041393102 27.497507260274716 34.653895121494955 18.341206576837227 19 23.70516137410223 26.409213956787102 28.663665695301212 21.221958973809457 20 24.494390185207887 27.442641857255072 29.383624153760234 18.679343803776806 21 22.896497363328518 26.786166714644672 27.035168030483135 23.282167891543672 22 23.46560430948448 30.843925575667974 27.666207470221092 18.02426264462645 23 19.38550616191987 30.718426006561938 30.21860717272718 19.67746065879101 24 22.706274763006167 27.371504800719947 30.97860585240136 18.943614583872524 25 20.467436373840126 29.164691545026418 30.606575747504085 19.761296333629375 26 18.135339875299447 31.08678003410831 31.344226923768474 19.43365316682377 27 19.725171790333608 30.23709654130914 29.70358618848399 20.334145479873264 28 18.728307321795388 30.36611701287167 28.98078239848598 21.924793266846958 29 20.56899952415374 28.72340618745437 28.590187396249167 22.117406892142725 30 19.132626883535675 28.666248330210948 30.760443049182385 21.440681737070996 31 22.758953244344994 27.390112359958703 29.09889547063957 20.752038925056734 32 19.97074077067466 29.8763793020466 29.50278380408122 20.65009612319752 33 18.44509343460486 30.602761719509115 31.524575961816133 19.427568884069895 34 20.34428240747047 29.847192443803927 31.386437750467906 18.422087398257702 35 20.04974591262591 30.367800100981114 30.593191402802045 18.989262583590932 36 18.475235494595406 29.467768138736805 32.02563038450118 20.031365982166612 37 19.845619451949055 29.132699162258497 28.513088292051673 22.508593093740778 38 20.021812587915537 31.21797241007302 28.67692397105337 20.083291030958073 39 22.46699715672003 28.089263190013014 28.93016937085506 20.513570282411894 40 23.16377254590001 27.799178712638415 30.37210383600406 18.66494490545751 41 22.58982587864357 27.520782138530635 30.91484998901185 18.974541993813943 42 21.205519310685535 30.807463456452876 29.96752491935718 18.019492313504404 43 19.248226409337096 30.630264921591493 30.731340518509636 19.390168150561774 44 18.670968843425225 30.690515716325145 29.77138404646787 20.86713139378176 45 19.21826855229569 31.133039282727204 29.266753301712452 20.38193886326465 46 19.89596501169667 28.48756956250091 29.913328393124395 21.70313703267803 47 22.48816732474382 28.018013272937953 29.35157302840205 20.14224637391617 48 19.867902698795266 30.067074843028884 28.59271784793826 21.472304610237586 49 21.692136684453907 28.78590291727663 28.318942500844564 21.203017897424907 50 19.68246876313928 31.99731561420763 27.900812126594758 20.41940349605833 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 160.0 1 94.0 2 28.0 3 98.5 4 169.0 5 214.0 6 259.0 7 226.5 8 194.0 9 275.0 10 356.0 11 583.5 12 811.0 13 1535.5 14 2260.0 15 3150.0 16 4040.0 17 4221.5 18 4403.0 19 4468.0 20 4533.0 21 5284.5 22 6036.0 23 7380.5 24 8725.0 25 11641.0 26 14557.0 27 20096.5 28 25636.0 29 32950.0 30 40264.0 31 50511.0 32 60758.0 33 74251.5 34 87745.0 35 101703.5 36 115662.0 37 117768.5 38 119875.0 39 111202.0 40 102529.0 41 93564.0 42 84599.0 43 76243.5 44 67888.0 45 63835.0 46 59782.0 47 56214.0 48 52646.0 49 49606.0 50 46566.0 51 40416.5 52 34267.0 53 31075.5 54 27884.0 55 28175.0 56 28466.0 57 27157.5 58 25849.0 59 22836.0 60 19823.0 61 16935.5 62 14048.0 63 11921.5 64 9795.0 65 8403.0 66 7011.0 67 6751.5 68 6492.0 69 6548.5 70 6605.0 71 5068.5 72 3532.0 73 3152.5 74 2773.0 75 1961.0 76 1149.0 77 1113.5 78 1078.0 79 930.5 80 783.0 81 618.0 82 453.0 83 401.5 84 350.0 85 290.5 86 231.0 87 154.0 88 77.0 89 50.0 90 23.0 91 14.5 92 6.0 93 7.5 94 9.0 95 8.5 96 8.0 97 6.0 98 4.0 99 3.0 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.032237588301478666 2 0.005993467120838287 3 9.081010789148918E-5 4 9.081010789148918E-5 5 0.0 6 1.8162021578297836E-4 7 0.0 8 0.0 9 0.0 10 9.081010789148918E-5 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 4.5405053945744595E-4 17 0.0 18 9.081010789148918E-5 19 0.0 20 3.632404315659567E-4 21 0.0 22 0.0 23 0.0 24 9.081010789148919E-4 25 9.081010789148918E-5 26 9.081010789148918E-5 27 1.8162021578297836E-4 28 0.0019070122657212731 29 2.7243032367446754E-4 30 0.0010897212946978701 31 5.448606473489351E-4 32 7.264808631319134E-4 33 9.081010789148918E-5 34 9.081010789148919E-4 35 2.7243032367446754E-4 36 5.448606473489351E-4 37 0.0021794425893957403 38 0.0 39 5.448606473489351E-4 40 9.081010789148918E-5 41 0.0011805314025893595 42 0.004268075070899992 43 0.003904834639334035 44 0.004631315502465949 45 0.0025426830209616972 46 0.002815113344636165 47 9.98911186806381E-4 48 0.0037232144235510565 49 0.0031783537762021218 50 0.0014529617262638269 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1101199.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 54.95782784623825 #Duplication Level Percentage of deduplicated Percentage of total 1 76.16648315414494 41.85944468838903 2 14.353939750188912 15.777226994123167 3 4.510566631952244 7.4367283334345435 4 1.8205312185639118 4.002097651941512 5 0.8952644617116355 2.460089508180161 6 0.5001889411240387 1.649357863013227 7 0.3213584609277481 1.2362814080819484 8 0.21584135074776867 0.948973743719632 9 0.171365364932482 0.8476081402290426 >10 0.8727285523548267 9.098270958134162 >50 0.0920385883432636 3.540437231461363 >100 0.07303853462565194 7.885986184192751 >500 0.005323992306056777 1.9951325149910197 >1k 0.0013309980765141942 1.2623647801084337 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTGTAGGACGTGGAATATGGCAAGAAAACTGAAAATCATGGAAAATGAGA 2955 0.2683438688193506 No Hit GTCCTACAGTGGACATTTCTAAATTTTCCACCTTTTTCAGTTTTCCTCGC 2243 0.20368707200061026 No Hit CTTTAGGACGTGAAATATGGCGAGGAAAACTGAAAAAGGTGGAAAATTTA 2147 0.19496930164302728 No Hit GTCCTAAAGTGTGTATTTCTCATTTTCCGTGATTTTCAGTTTTCTCGCCA 1977 0.17953158330147412 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1235 0.11215048324598915 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 1128 0.10243380170159981 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 14 0.0 0.0 0.0 0.0 0.0 15 0.0 0.0 0.0 0.0 0.0 16 0.0 0.0 0.0 0.0 0.0 17 0.0 0.0 0.0 0.0 0.0 18 0.0 0.0 0.0 0.0 0.0 19 0.0 0.0 0.0 0.0 0.0 20 0.0 0.0 0.0 9.081010789148919E-5 0.0 21 0.0 0.0 0.0 9.081010789148919E-5 0.0 22 0.0 0.0 0.0 1.8162021578297839E-4 0.0 23 0.0 0.0 0.0 4.5405053945744595E-4 0.0 24 0.0 0.0 0.0 5.448606473489351E-4 0.0 25 0.0 0.0 0.0 6.356707552404243E-4 0.0 26 0.0 0.0 0.0 7.264808631319135E-4 0.0 27 0.0 0.0 0.0 8.172909710234027E-4 0.0 28 0.0 0.0 0.0 0.0011805314025893595 0.0 29 0.0 0.0 0.0 0.0017253920499382945 0.0 30 0.0 0.0 0.0 0.0035415942077680783 0.0 31 0.0 0.0 0.0 0.008263719818125516 0.0 32 0.0 0.0 0.0 0.014438807154746781 0.0 33 0.0 0.0 0.0 0.020613894491368044 0.0 34 0.0 0.0 0.0 0.027424652583229733 0.0 35 0.0 0.0 0.0 0.036324043156595674 0.0 36 0.0 0.0 0.0 0.048674217829838204 0.0 37 0.0 0.0 0.0 0.06783515059494243 0.0 38 0.0 0.0 0.0 0.09289874037299344 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTTCGGG 25 0.0023530952 35.198803 20 CGCTATC 30 0.00574575 29.332336 12 GTATCAA 2855 0.0 27.288681 1 GGTATCA 1115 0.0 26.251987 1 GACCCGG 140 0.0 23.570625 6 CTCTAGG 265 0.0 23.253992 1 CTAGGAC 265 0.0 23.244492 3 ATTGCGA 95 2.6857379E-8 23.157106 17 TAGGACC 1430 0.0 22.922297 4 AGTGACG 135 5.456968E-12 22.81404 19 TAGGACA 865 0.0 22.380741 4 TGTAGGA 3495 0.0 22.034725 2 ACGGGAT 60 2.870568E-4 22.002247 43 CAATACG 210 0.0 22.00025 38 CTCGAAT 60 2.8732143E-4 21.999252 10 CGACCCG 160 0.0 21.99925 5 AGGACCT 1960 0.0 21.550287 5 AATACGA 215 0.0 21.489592 39 GTCCTAC 3140 0.0 21.447525 1 CTGTAGG 3450 0.0 21.370323 1 >>END_MODULE