##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062219_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 228027 Sequences flagged as poor quality 0 Sequence length 50 %GC 40 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.046748849916895 32.0 32.0 32.0 32.0 32.0 2 31.419195972406776 32.0 32.0 32.0 32.0 32.0 3 31.57564674358738 32.0 32.0 32.0 32.0 32.0 4 31.679542334898937 32.0 32.0 32.0 32.0 32.0 5 31.66151815355199 32.0 32.0 32.0 32.0 32.0 6 35.296824498853205 36.0 36.0 36.0 36.0 36.0 7 35.30185899038272 36.0 36.0 36.0 36.0 36.0 8 35.27083634832717 36.0 36.0 36.0 36.0 36.0 9 35.322988067202566 36.0 36.0 36.0 36.0 36.0 10 35.232586491950514 36.0 36.0 36.0 36.0 36.0 11 35.32475978721818 36.0 36.0 36.0 36.0 36.0 12 35.27167396843356 36.0 36.0 36.0 36.0 36.0 13 35.29184263267069 36.0 36.0 36.0 36.0 36.0 14 35.25300951203147 36.0 36.0 36.0 36.0 36.0 15 35.24687427366057 36.0 36.0 36.0 36.0 36.0 16 35.26188126844628 36.0 36.0 36.0 36.0 36.0 17 35.2514877624141 36.0 36.0 36.0 36.0 36.0 18 35.243107175904605 36.0 36.0 36.0 36.0 36.0 19 35.180000613962385 36.0 36.0 36.0 36.0 36.0 20 35.12767786270924 36.0 36.0 36.0 36.0 36.0 21 35.10493055646919 36.0 36.0 36.0 36.0 36.0 22 35.07828020366009 36.0 36.0 36.0 36.0 36.0 23 35.090270011884556 36.0 36.0 36.0 36.0 36.0 24 35.05613808891052 36.0 36.0 36.0 36.0 36.0 25 35.02543119893697 36.0 36.0 36.0 36.0 36.0 26 35.02526016655922 36.0 36.0 36.0 36.0 36.0 27 34.98308095094002 36.0 36.0 36.0 36.0 36.0 28 34.895209777789475 36.0 36.0 36.0 36.0 36.0 29 34.83568173944314 36.0 36.0 36.0 32.0 36.0 30 34.78066632460191 36.0 36.0 36.0 32.0 36.0 31 34.79423050779074 36.0 36.0 36.0 32.0 36.0 32 34.75699368934381 36.0 36.0 36.0 32.0 36.0 33 34.7469203208392 36.0 36.0 36.0 32.0 36.0 34 34.70440342591009 36.0 36.0 36.0 32.0 36.0 35 34.698263802093614 36.0 36.0 36.0 32.0 36.0 36 34.59631096317541 36.0 36.0 36.0 32.0 36.0 37 34.521337385485054 36.0 36.0 36.0 32.0 36.0 38 34.46788757471703 36.0 36.0 36.0 32.0 36.0 39 34.268411196919665 36.0 36.0 36.0 32.0 36.0 40 34.36566722361825 36.0 36.0 36.0 32.0 36.0 41 34.326084191784304 36.0 36.0 36.0 32.0 36.0 42 34.30110907918799 36.0 36.0 36.0 32.0 36.0 43 34.32716739684336 36.0 36.0 36.0 32.0 36.0 44 34.17701851096581 36.0 36.0 36.0 32.0 36.0 45 34.12452472733492 36.0 36.0 36.0 32.0 36.0 46 33.89734110434291 36.0 36.0 36.0 32.0 36.0 47 33.894376543128665 36.0 36.0 36.0 32.0 36.0 48 33.785560481872764 36.0 36.0 36.0 32.0 36.0 49 33.69456248602139 36.0 36.0 36.0 27.0 36.0 50 33.39836949133217 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 0.0 20 0.0 21 12.0 22 22.0 23 53.0 24 148.0 25 347.0 26 840.0 27 1613.0 28 2690.0 29 3943.0 30 5750.0 31 7880.0 32 11360.0 33 18007.0 34 38324.0 35 137037.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.56335186021926 21.922994248915366 13.028334291116305 24.485319599749076 2 12.24787842905072 22.271780365326844 45.153608315242415 20.32673289038002 3 18.669800812188083 27.010516344627366 31.316165700402586 23.003517142781963 4 9.822082472689637 18.861801453336664 41.37931034482759 29.93680572914611 5 10.038723484499643 41.436321137409166 36.92852162243945 11.596433755651743 6 27.619974827542354 42.27525687747504 18.582887114245242 11.521881180737369 7 24.72119529704816 33.92142158604025 22.183337938051196 19.1740451788604 8 22.412258197494157 41.381064523060864 20.05858955299153 16.148087726453447 9 25.266306183039728 15.109614212352046 21.604897665627316 38.019181938980914 10 14.418906532998285 29.485543378634986 34.79368671253843 21.3018633758283 11 33.22238156007841 22.849487122139045 27.127050743990843 16.801080573791698 12 22.62407521916264 26.441167054778603 34.09420814201827 16.840549584040488 13 28.881667521828557 22.645125357961994 27.925640384691285 20.547566735518163 14 18.989417919807742 25.54653615580611 28.486977419340693 26.977068505045455 15 21.978099084757506 34.69545273147478 24.298438342827822 19.028009840939887 16 19.62635675912729 28.777984870080036 31.63293498519899 19.962723385593684 17 17.462405767738034 30.368772119091158 30.84196169751828 21.326860415652533 18 17.607125471983583 28.84351414525473 35.45325772825148 18.09610265451021 19 22.80607121086538 26.39380424248006 29.091291820705443 21.70883272594912 20 21.717165072557197 29.80524236165015 30.502528209378717 17.975064356413935 21 21.56586719993685 26.692014542137553 28.708880965850536 23.03323729207506 22 20.972516412530094 30.788459261403254 29.35617273393063 18.882851592136017 23 20.90366491687388 29.75480973744337 30.349914703083407 18.99161064259934 24 22.418791086864047 28.708507475123124 30.52542945229209 18.347271985720738 25 20.942256838006028 29.561411587224317 31.58354054563714 17.912791029132517 26 17.29627323199986 30.538184242147825 33.74615175462447 18.419390771227842 27 18.07417542659422 30.4292912681393 32.158033917036136 19.33849938823034 28 17.669115228593355 31.266308518802767 30.306764609143734 20.757811643460148 29 19.526196459191237 27.736189135497114 29.461423427927397 23.276190977384257 30 19.120355752026104 29.201750692909517 30.83710486615444 20.84078868890994 31 21.607813212644285 27.372557274672843 30.845437322387113 20.17419219029576 32 18.479033092717497 30.53423732381395 31.116188504819625 19.870541078648927 33 19.42717058581039 30.410567216019224 31.908203450483718 18.254058747686667 34 19.068690439122367 30.18248159176925 32.92869578945983 17.820132179648542 35 18.916180978568327 31.392335118209687 31.052463085511807 18.639020817710183 36 17.96059238598938 30.33588127721717 31.5870489021037 20.116477434689752 37 19.0697348051276 29.57096056942124 28.942948237223764 22.416356388227403 38 19.9827213444022 31.75895836896508 29.126375385371027 19.131944901261694 39 20.80025961951707 28.46999903519774 29.857560102795293 20.872181242489894 40 22.468391900959098 29.38336249654646 30.64987918097418 17.49836642152026 41 21.4602099797388 27.655226250098675 32.57536553490453 18.309198235258002 42 19.524068486422006 32.57359132692443 29.74571959862466 18.15662058802891 43 17.39593795090631 32.195971282339165 31.585041203791015 18.823049562963515 44 17.73822889621781 31.44691600589432 30.472422987860504 20.342432110027367 45 18.14386331143486 31.57326924594995 30.747910289358042 19.534957153257142 46 20.177527508431243 28.97189293968538 28.696479710202134 22.154099841681248 47 21.963477528681192 30.145072448514192 28.44525137704803 19.44619864575659 48 19.382581771294745 30.25296692308367 28.048277737331915 22.316173568289667 49 20.522412605967048 30.17204706625325 29.329134852797356 19.976405474982347 50 18.77433954320598 31.972950215766758 27.782163281058136 21.470546959969123 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 580.0 1 312.0 2 44.0 3 126.0 4 208.0 5 176.5 6 145.0 7 104.5 8 64.0 9 108.0 10 152.0 11 262.0 12 372.0 13 670.0 14 968.0 15 1222.5 16 1477.0 17 1690.5 18 1904.0 19 1897.0 20 1890.0 21 2105.5 22 2321.0 23 2316.5 24 2312.0 25 3221.5 26 4131.0 27 6253.5 28 8376.0 29 9763.0 30 11150.0 31 11645.5 32 12141.0 33 14441.0 34 16741.0 35 18998.0 36 21255.0 37 22744.5 38 24234.0 39 22067.0 40 19900.0 41 18639.0 42 17378.0 43 14435.0 44 11492.0 45 10980.5 46 10469.0 47 10245.0 48 10021.0 49 9029.5 50 8038.0 51 8036.5 52 8035.0 53 7481.0 54 6927.0 55 6413.0 56 5899.0 57 5786.0 58 5673.0 59 4990.0 60 4307.0 61 3817.0 62 3327.0 63 2671.5 64 2016.0 65 1803.0 66 1590.0 67 1261.5 68 933.0 69 786.0 70 639.0 71 521.0 72 403.0 73 314.0 74 225.0 75 184.5 76 144.0 77 122.5 78 101.0 79 62.5 80 24.0 81 18.0 82 12.0 83 6.0 84 0.0 85 1.0 86 2.0 87 2.0 88 2.0 89 2.5 90 3.0 91 1.5 92 0.0 93 0.5 94 1.0 95 0.5 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.030698119082389366 2 0.005262534699838177 3 4.385445583198481E-4 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 8.770891166396962E-4 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0017541782332793924 25 0.0 26 4.385445583198481E-4 27 0.0 28 8.770891166396962E-4 29 0.0 30 0.0013156336749595443 31 0.0013156336749595443 32 4.385445583198481E-4 33 4.385445583198481E-4 34 0.0017541782332793924 35 0.0 36 0.0 37 0.0026312673499190886 38 0.0 39 4.385445583198481E-4 40 0.0 41 0.0021927227915992404 42 0.004823990141518329 43 0.0061396238164778735 44 0.004823990141518329 45 0.0021927227915992404 46 0.0026312673499190886 47 0.0013156336749595443 48 0.005701079258158026 49 0.003508356466558785 50 0.0013156336749595443 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 228027.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 43.03350041881006 #Duplication Level Percentage of deduplicated Percentage of total 1 69.5153269199413 29.91487850123012 2 14.890754932333278 12.81602617233924 3 5.976887330833197 7.716191503637727 4 2.9400375020381544 5.060804203011047 5 1.6376569378770585 3.5237055260999792 6 1.0211152780042392 2.636529884618927 7 0.6715718245556824 2.023006047529459 8 0.509538561878363 1.7541782332793923 9 0.3648296103049079 1.4129905669065506 >10 2.1594244252405024 17.403202252364853 >50 0.19566280776129136 5.814662298762866 >100 0.11413663786075331 9.15242493213523 >500 0.0030572313712701775 0.7713998780846127 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCATAGGGTCTTCTCGTCTTATTATTATATTTCAGCCTCTTCACTGAAAG 666 0.2920706758410188 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 585 0.2565485666171112 No Hit GTGTATATCAATGAGTTACAATGAGAAACATGGAAAATGATAAAAACCAC 508 0.22278063562648281 No Hit GATATACACTGTTCTACAAATCCCGTTTCCAACGAATGTGTTTTTCAGTG 471 0.20655448696864845 No Hit GTATTAGAGGCACTGCCTGCCCAGTGACTAAAGTTTAACGGCCGCGGTAT 404 0.17717200156121862 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 357 0.15656040732018578 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 336 0.14735097159546898 No Hit GACTATAGGCAATAATCACACTATAAATAATCCACCTATAACTTCTCTGT 325 0.14252698145395062 No Hit GTTATATAATTTAAGCTCCATAGGGTCTTCTCGTCTTATTATTATATTTC 315 0.13814153587075215 No Hit CCATTGGGATGTCCTGATCCAACATCGAGGTCGTAAACCCTAATTGTCGA 310 0.1359488130791529 No Hit GTCAGGATACCGCGGCCGTTAAACTTTAGTCACTGGGCAGGCAGTGCCTC 305 0.13375609028755367 No Hit CTTCTACACCATTGGGATGTCCTGATCCAACATCGAGGTCGTAAACCCTA 303 0.13287900117091397 No Hit CTCTAATACTTGTAATGCTAGAGGTGATGTTTTTGGTAAACAGGCGGGGT 303 0.13287900117091397 No Hit CTGTAGGACGTGGAATATGGCAAGAAAACTGAAAATCATGGAAAATGAGA 299 0.13112482293763458 No Hit ATCTATAACTTTATAGATGCAACACTGTTAGTATGAGTAACAAGAATTCC 298 0.13068627837931474 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 296 0.12980918926267504 No Hit GTCCTACAGTGGACATTTCTAAATTTTCCACCTTTTTCAGTTTTCCTCGC 295 0.1293706447043552 No Hit GTCCTACAGTGTGCATTTCTCATTTTTCACGTTTTTCAGTGATTTCGTCA 288 0.12630083279611626 No Hit ATAAATAATCCACCTATAACTTCTCTGTTAACCCAACACCGGAATGCCTA 286 0.12542374367947656 No Hit GTGTATATCAATGAGTTACAATGAAAAACATGGAAAATGATAAAAACCAC 286 0.12542374367947656 No Hit CTGTTAGTATGAGTAACAAGAATTCCAATTCTCCAGGCATACGCGTATAA 283 0.124108110004517 No Hit GTTCATGCTAGTCCCTAATTAAGGAACAAGTGATTATGCTACCTTTGCAC 283 0.124108110004517 No Hit ATCCTGACCGTGCAAAGGTAGCATAATCACTTGTTCCTTAATTAGGGACT 281 0.12323102088787731 No Hit ACCTATAACTTCTCTGTTAACCCAACACCGGAATGCCTAAAGGAAAGATC 280 0.12279247632955746 No Hit TTGTAGAACAGTGTATATCAATGAGTTACAATGAGAAACATGGAAAATGA 275 0.12059975353795824 No Hit CCTATAACTTCTCTGTTAACCCAACACCGGAATGCCTAAAGGAAAGATCC 265 0.11621430795475975 No Hit TTGTAGAACAGTGTATATCAATGAGTTACAATGAAAAACATGGAAAATGA 261 0.11446012972148034 No Hit TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 251 0.11007468413828188 No Hit GTATCCTGACCGTGCAAAGGTAGCATAATCACTTGTTCCTTAATTAGGGA 247 0.10832050590500247 No Hit CACTATAAATAATCCACCTATAACTTCTCTGTTAACCCAACACCGGAATG 245 0.10744341678836278 No Hit CTGTTAACCCAACACCGGAATGCCTAAAGGAAAGATCCAAAAAGATAAAA 240 0.10525069399676354 No Hit CTATAGAACTAGTACCGCAAGGGAAAGATGAAAGACTAATTAAAAGTAAG 238 0.10437360488012384 No Hit GATTAAACCTTGTACCTTTTGCATAATGAACTAACTAGAAAACTTCTAAC 233 0.1021808820885246 No Hit CTTTAGGACGTGAAATATGGCGAGGAAAACTGAAAAAGGTGGAAAATTTA 233 0.1021808820885246 No Hit GTTATAGATTAACCCAATTTTAAGTTTAGGAAGTTGGTGTAAATTATGGA 230 0.10086524841356508 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 14 0.0 0.0 0.0 0.0 0.0 15 0.0 0.0 0.0 0.0 0.0 16 0.0 0.0 0.0 0.0 0.0 17 0.0 0.0 0.0 0.0 0.0 18 0.0 0.0 0.0 0.0 0.0 19 0.0 0.0 0.0 0.0 0.0 20 0.0 0.0 0.0 4.385445583198481E-4 0.0 21 0.0 0.0 0.0 4.385445583198481E-4 0.0 22 0.0 0.0 0.0 4.385445583198481E-4 0.0 23 0.0 0.0 0.0 4.385445583198481E-4 0.0 24 0.0 0.0 0.0 0.0013156336749595443 0.0 25 0.0 0.0 0.0 0.0021927227915992404 0.0 26 0.0 0.0 0.0 0.004385445583198481 0.0 27 0.0 0.0 0.0 0.005701079258158025 0.0 28 0.0 0.0 0.0 0.0074552574914374175 0.0 29 0.0 0.0 0.0 0.010086524841356507 0.0 30 0.0 0.0 0.0 0.016664693216154228 0.0 31 0.0 0.0 0.0 0.02806685173247028 0.0 32 0.0 0.0 0.0 0.040784643923745874 0.0 33 0.0 0.0 0.0 0.049555535090142835 0.0 34 0.0 0.0 0.0 0.06490459463133752 0.0 35 0.0 0.0 0.0 0.07718384226429327 0.0 36 0.0 0.0 0.0 0.10042670385524521 0.0 37 0.0 0.0 0.0 0.12366956544619716 0.0 38 0.0 0.0 0.0 0.15392913997026667 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CATCGAA 25 0.002348919 35.19965 11 GTACTAC 35 3.2058012E-4 31.435152 1 TCACATA 30 0.0057356465 29.33304 43 CTAAACC 30 0.0057356465 29.33304 4 TGCGACC 30 0.0057356465 29.33304 12 TGTTCGG 30 0.0057356465 29.33304 10 ACTACAG 30 0.0057356465 29.33304 3 CTAGGTC 30 0.0057356465 29.33304 3 ATACATG 55 4.9298724E-6 28.005863 1 GTCCTAT 40 7.005943E-4 27.505758 1 GTATGGT 40 7.005943E-4 27.505758 1 GAATCGG 40 7.0149347E-4 27.499727 33 GATATAC 340 0.0 27.18216 1 GACCTAG 65 5.8962905E-7 27.07665 7 GGACCTA 75 6.960909E-8 26.399736 6 TAGGACC 380 0.0 26.052372 4 GTCCTAC 540 0.0 25.672043 1 TACACTA 60 9.708514E-6 25.66641 5 AGGACCT 420 0.0 25.142607 5 TCCTACA 560 0.0 24.755182 2 >>END_MODULE