##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062218_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1509690 Sequences flagged as poor quality 0 Sequence length 25 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.177568242486867 32.0 32.0 32.0 32.0 32.0 2 30.708737555392165 32.0 32.0 32.0 32.0 32.0 3 30.728637004948034 32.0 32.0 32.0 32.0 32.0 4 30.72950340798442 32.0 32.0 32.0 32.0 32.0 5 30.58318661447052 32.0 32.0 32.0 32.0 32.0 6 34.25780325762243 36.0 36.0 36.0 32.0 36.0 7 34.1872046579099 36.0 36.0 36.0 32.0 36.0 8 34.118861488120075 36.0 36.0 36.0 32.0 36.0 9 34.278459816253665 36.0 36.0 36.0 32.0 36.0 10 33.88402850916413 36.0 36.0 36.0 32.0 36.0 11 34.29689538911962 36.0 36.0 36.0 32.0 36.0 12 34.03945644470057 36.0 36.0 36.0 32.0 36.0 13 34.16618047413707 36.0 36.0 36.0 32.0 36.0 14 34.03012406520544 36.0 36.0 36.0 32.0 36.0 15 33.96828156773907 36.0 36.0 36.0 32.0 36.0 16 33.97629910776384 36.0 36.0 36.0 32.0 36.0 17 33.886579363975386 36.0 36.0 36.0 32.0 36.0 18 33.89794328637005 36.0 36.0 36.0 32.0 36.0 19 33.901442680285356 36.0 36.0 36.0 32.0 36.0 20 33.89594751240321 36.0 36.0 36.0 32.0 36.0 21 33.87932158257656 36.0 36.0 36.0 32.0 36.0 22 33.83951539720075 36.0 36.0 36.0 32.0 36.0 23 33.800890248991514 36.0 36.0 36.0 32.0 36.0 24 33.77080592704463 36.0 36.0 36.0 32.0 36.0 25 33.40964701362531 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 3 2.0 4 13.0 5 110.0 6 332.0 7 91.0 8 266.0 9 193.0 10 115.0 11 34.0 12 51.0 13 60.0 14 248.0 15 339.0 16 488.0 17 700.0 18 935.0 19 1287.0 20 1948.0 21 2852.0 22 4488.0 23 6505.0 24 9437.0 25 13534.0 26 19112.0 27 25049.0 28 33839.0 29 45129.0 30 60056.0 31 81908.0 32 114808.0 33 159379.0 34 325756.0 35 600626.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.11359127542697 17.371844254395175 11.790480947122777 25.724083523055086 2 16.81029514824976 19.375338647476752 37.158951355318536 26.655414848954944 3 19.404165515761278 22.572252018803972 28.063743267617465 29.95983919781729 4 12.90003961476955 15.324158782355926 35.12796630492243 36.647835297952085 5 15.39573703405284 35.81610989779907 33.01154796234256 15.776605105805523 6 35.18346677978684 34.59846757516305 16.399729572087598 13.818336072962511 7 31.256216497224294 29.921874378350278 19.75267955896356 19.06922956546187 8 28.61524077291355 32.4721164940387 18.918013872127105 19.994628860920653 9 26.987480718396405 14.550034020507802 18.539585148755165 39.92290011234063 10 16.607249571036206 26.219288546882247 30.391529366194803 26.781932515886748 11 37.411813712354174 21.260224833576988 21.75359046540073 19.57437098866811 12 24.811139925583493 23.43702121732671 28.09919547929669 23.652643377793105 13 29.19371772194798 19.256703654404404 25.02770598429364 26.521872639353973 14 23.86392800229718 19.497565216583983 24.666746687693188 31.971760093425655 15 25.361337426014703 26.81186046326535 21.87079666678163 25.956005443938313 16 26.158029292684787 25.902970054082374 23.0617719521051 24.877228701127738 17 24.281958706822685 25.97708528423214 24.73226815363842 25.008687855306754 18 25.087431947640297 24.98086908085383 25.54405416337871 24.38764480812716 19 25.77009398465083 24.994413963433836 25.020006961825985 24.215485090089345 20 25.98850878018832 24.209067004711322 24.542625318077125 25.259798897023234 21 26.91591647737896 24.081573388601367 24.262573543744356 24.73993659027532 22 26.0938148554333 24.061009361063334 24.816498492867478 25.028677290635887 23 24.546818982159145 24.128375654977834 25.28095101720444 26.043854345658584 24 24.82420815769619 24.8496006810235 25.0645420925826 25.261649068697718 25 24.99119909146779 24.313446263409368 25.00319882362847 25.69215582149437 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 646.0 1 646.0 2 600.0 3 554.0 4 554.0 5 554.0 6 1049.0 7 1544.0 8 1544.0 9 1544.0 10 1848.0 11 2152.0 12 2152.0 13 2152.0 14 2967.0 15 3782.0 16 3782.0 17 3782.0 18 6424.0 19 9066.0 20 9066.0 21 9066.0 22 14287.5 23 19509.0 24 19509.0 25 19509.0 26 28652.5 27 37796.0 28 37796.0 29 37796.0 30 47382.0 31 56968.0 32 56968.0 33 56968.0 34 71933.0 35 86898.0 36 86898.0 37 86898.0 38 102635.0 39 118372.0 40 118372.0 41 118372.0 42 137643.0 43 156914.0 44 156914.0 45 156914.0 46 175306.5 47 193699.0 48 193699.0 49 193699.0 50 201423.5 51 209148.0 52 209148.0 53 209148.0 54 195701.5 55 182255.0 56 182255.0 57 182255.0 58 167875.0 59 153495.0 60 153495.0 61 153495.0 62 136066.5 63 118638.0 64 118638.0 65 118638.0 66 97675.0 67 76712.0 68 76712.0 69 76712.0 70 57865.5 71 39019.0 72 39019.0 73 39019.0 74 29749.5 75 20480.0 76 20480.0 77 20480.0 78 16660.5 79 12841.0 80 12841.0 81 12841.0 82 8937.0 83 5033.0 84 5033.0 85 5033.0 86 3772.0 87 2511.0 88 2511.0 89 2511.0 90 1664.0 91 817.0 92 817.0 93 817.0 94 505.5 95 194.0 96 194.0 97 194.0 98 420.5 99 647.0 100 647.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0015234915777411256 2 5.299101139969132E-4 3 5.961488782465274E-4 4 0.010068292165941352 5 0.033516814710304765 6 0.06425160132212573 7 0.10637945538488035 8 0.10796918572687107 9 0.11764004530731476 10 0.13161642456398334 11 0.13817406222469514 12 0.12982797792924375 13 0.1253899807245196 14 0.11611655372957361 15 0.1296955004007445 16 0.11956096947055356 17 0.12174684869079083 18 0.10995634865435952 19 0.09703978962568474 20 0.09326418006345673 21 0.09299922500645828 22 0.10121283177341044 23 0.08226854519802079 24 0.09087958455047063 25 0.08763388510223953 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 1509690.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 52.993127094368695 #Duplication Level Percentage of deduplicated Percentage of total 1 77.99182989103763 41.330309537381396 2 13.079818714185961 13.862809909843177 3 3.942448969268581 6.267680978745384 4 1.6038349249184254 3.399689120583576 5 0.8214851464337385 2.176653338554959 6 0.5184478968455755 1.648450517360744 7 0.34045418319069526 1.2629212259743798 8 0.254969919909238 1.0809322696793005 9 0.19043095964209877 0.9082378842314702 >10 1.082590870978627 10.527726267265539 >50 0.08464689302254272 3.098089210272438 >100 0.07587360614379987 8.353282677622232 >500 0.009656551243646528 3.4807666402393975 >1k 0.003511473179507828 2.602450422246006 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 2620 0.1735455623339891 No Hit GCGCAAGACGGACCAGAGCGAAAGC 2016 0.13353734872722214 No Hit GAATAGGACCGCGGTTCTATTTTGT 1685 0.11161231776059986 No Hit GTTCAAAGCAGGCCCGAGCCGCCTG 1654 0.10955891606886181 No Hit TCGTAGTTCCGACCATAAACGATGC 1619 0.10724055932012533 No Hit GATTAAGAGGGACGGCCGGGGGCAT 1601 0.10604826156363227 No Hit GTCTTGCGCCGGTCCAAGAATTTCA 1569 0.10392862110764461 No Hit ATCAGATACCGTCGTAGTTCCGACC 1551 0.10273632335115156 No Hit GAACTACGACGGTATCTGATCGTCT 1544 0.10227265200140426 No Hit GTATCTGATCGTCTTCGAACCTCCG 1531 0.10141154806615926 No Hit GAATAACGCCGCCGCATCGCCAGTC 1517 0.10048420536666468 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 6.623876424961415E-5 0.0 8 0.0 0.0 0.0 6.623876424961415E-5 0.0 9 0.0 0.0 0.0 6.623876424961415E-5 0.0 10 0.0 0.0 0.0 6.623876424961415E-5 0.0 11 0.0 0.0 0.0 6.623876424961415E-5 0.0 12 0.0 0.0 0.0 6.623876424961415E-5 0.0 13 0.0 0.0 0.0 6.623876424961415E-5 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTTCGTG 40 0.005276927 14.250846 15 TATCGAG 40 0.005276927 14.250846 10 AGTATCG 40 0.005278088 14.250373 8 CGTGACG 40 0.005281574 14.248955 18 GTATCGA 50 0.0014988402 13.300791 9 CCAATCG 65 5.450938E-5 13.154191 17 CGACCAT 330 0.0 12.955315 10 CGAACGA 90 5.4028715E-7 12.666999 16 CCGACCA 355 0.0 12.578211 9 CGGTCCA 365 0.0 12.233603 10 CGGAATT 110 3.8098733E-8 12.091627 15 AATCGGT 55 0.0030700576 12.090023 19 CTATTCC 305 0.0 11.836376 4 CCGTCGT 225 0.0 11.822925 9 GGTATCA 830 0.0 11.785556 1 CGTCGTA 250 0.0 11.780699 10 GTCCTAA 105 2.7302667E-7 11.758312 1 GCGTTAT 180 0.0 11.607565 1 GTATCAA 1840 0.0 11.458456 1 AAGACGG 365 0.0 11.452735 5 >>END_MODULE