##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062218_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1509690 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.912547609111805 32.0 32.0 32.0 32.0 32.0 2 31.302297160344178 32.0 32.0 32.0 32.0 32.0 3 31.48038935145626 32.0 32.0 32.0 32.0 32.0 4 31.588789751538396 32.0 32.0 32.0 32.0 32.0 5 31.52082016837894 32.0 32.0 32.0 32.0 32.0 6 35.186398532148985 36.0 36.0 36.0 36.0 36.0 7 35.19069345362293 36.0 36.0 36.0 36.0 36.0 8 35.12883969556664 36.0 36.0 36.0 36.0 36.0 9 35.24986189217654 36.0 36.0 36.0 36.0 36.0 10 35.08402122290006 36.0 36.0 36.0 36.0 36.0 11 35.26533857944346 36.0 36.0 36.0 36.0 36.0 12 35.1594208082454 36.0 36.0 36.0 36.0 36.0 13 35.214774556365875 36.0 36.0 36.0 36.0 36.0 14 35.16824977313223 36.0 36.0 36.0 36.0 36.0 15 35.133891726115955 36.0 36.0 36.0 36.0 36.0 16 35.14706396677464 36.0 36.0 36.0 36.0 36.0 17 35.12599474064212 36.0 36.0 36.0 36.0 36.0 18 35.12844358775643 36.0 36.0 36.0 36.0 36.0 19 35.128711854751636 36.0 36.0 36.0 36.0 36.0 20 35.12899933098848 36.0 36.0 36.0 36.0 36.0 21 35.11113738582093 36.0 36.0 36.0 36.0 36.0 22 35.099933098848105 36.0 36.0 36.0 36.0 36.0 23 35.06665143175089 36.0 36.0 36.0 36.0 36.0 24 35.04341023653863 36.0 36.0 36.0 36.0 36.0 25 35.03414210864482 36.0 36.0 36.0 36.0 36.0 26 34.98185720247203 36.0 36.0 36.0 36.0 36.0 27 34.97656207565792 36.0 36.0 36.0 36.0 36.0 28 34.958721989282566 36.0 36.0 36.0 36.0 36.0 29 34.92531976763441 36.0 36.0 36.0 32.0 36.0 30 34.90643310878392 36.0 36.0 36.0 32.0 36.0 31 34.9139565076274 36.0 36.0 36.0 32.0 36.0 32 34.886921818386554 36.0 36.0 36.0 32.0 36.0 33 34.86341434334201 36.0 36.0 36.0 32.0 36.0 34 34.853124813703474 36.0 36.0 36.0 32.0 36.0 35 34.83952135868953 36.0 36.0 36.0 32.0 36.0 36 34.810521365313406 36.0 36.0 36.0 32.0 36.0 37 34.79914088322768 36.0 36.0 36.0 32.0 36.0 38 34.78174989567395 36.0 36.0 36.0 32.0 36.0 39 34.77363697182865 36.0 36.0 36.0 32.0 36.0 40 34.758792202372675 36.0 36.0 36.0 32.0 36.0 41 34.72986109731137 36.0 36.0 36.0 32.0 36.0 42 34.6853777927919 36.0 36.0 36.0 32.0 36.0 43 34.69046492988627 36.0 36.0 36.0 32.0 36.0 44 34.634010955891604 36.0 36.0 36.0 32.0 36.0 45 34.62223569077095 36.0 36.0 36.0 32.0 36.0 46 34.59743987176175 36.0 36.0 36.0 32.0 36.0 47 34.57492664056859 36.0 36.0 36.0 32.0 36.0 48 34.55028582026774 36.0 36.0 36.0 32.0 36.0 49 34.52908146705615 36.0 36.0 36.0 32.0 36.0 50 34.102512436327984 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 1.0 18 0.0 19 4.0 20 21.0 21 37.0 22 91.0 23 265.0 24 699.0 25 1726.0 26 3668.0 27 6955.0 28 11919.0 29 19261.0 30 29408.0 31 44353.0 32 69967.0 33 122615.0 34 278881.0 35 919819.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.457680753425834 18.216006986177387 12.28246048079 26.043851779606776 2 16.30862253641107 19.848413890226592 36.651923608125664 27.191039965236673 3 18.719045735970436 22.958533788791982 28.438278928016203 29.884141547221375 4 12.725990103928622 15.81476991965238 35.26737277189357 36.19186720452543 5 15.060850281084381 36.17016484852178 32.79119076842979 15.977794101964045 6 35.3509272789176 34.82247301756789 16.148523600271844 13.678076103242661 7 31.116056938841748 30.04696328385298 19.719876265988383 19.117103511316895 8 28.51148248978267 32.814617570494605 18.686021633580406 19.98787830614232 9 27.140671263636907 14.300750485198948 18.404506885519545 40.1540713656446 10 16.586120329339135 26.28837708403712 30.459432068835323 26.66607051778842 11 37.6913803496082 21.111618941637026 21.62940736177626 19.56759334697852 12 24.892858798826246 23.334326914797078 28.10504143234704 23.667772854029636 13 29.333505554120382 19.1503553709702 25.10575018712451 26.410388887784908 14 23.947697871748506 19.283164093290676 24.642873702548204 32.12626433241261 15 25.281614106207233 26.905391173022274 21.905887963754147 25.90710675701634 16 26.23373664122643 25.811727237921627 23.072474865567717 24.882061255284224 17 24.357583344925118 25.96612549596275 24.628036219356293 25.048254939755843 18 25.214895537949257 24.90257914388877 25.573115486852572 24.309409831309402 19 25.80066106286721 24.858547118944948 25.156886513125208 24.183905305062627 20 26.073616584099884 23.98735631955498 24.6844544597655 25.254572636579635 21 26.97189489232889 23.994131245487484 24.34837615669442 24.685597705489208 22 26.083434347448815 23.997310706171465 24.97360385244653 24.94565109393319 23 24.558949188243943 24.01022726520014 25.389517053169858 26.041306493386056 24 24.884975471590632 24.628960612792927 25.26002233588884 25.2260415797276 25 25.19096661031948 24.063912543518924 25.271314337796944 25.473806508364643 26 24.86339865601102 25.165382182375794 25.422853111741855 24.54836604987133 27 25.44168183540397 24.509963674517316 24.931972518752268 25.11638197132645 28 24.99576063484493 24.379462925426918 25.509916140058024 25.114860299670124 29 24.73997904199946 24.732096608168852 25.4523126001036 25.07561174972809 30 24.823737013769843 24.786046807394435 25.59959885432371 24.790617324512016 31 25.4102340418908 24.56873510866822 24.612452779947102 25.408578069493874 32 25.319652775247814 24.508291464775763 24.558500614366572 25.613555145609844 33 24.80931477849382 24.23449364007241 25.170647955503362 25.78554362593041 34 25.532630842644384 24.414311415164576 25.287412663379428 24.765645078811612 35 26.123145974532484 24.074974431803128 25.326491301513954 24.47538829215043 36 24.831521256738156 24.845100239387527 24.970556791279776 25.35282171259454 37 25.873740940000978 24.617694868639123 24.85337738746127 24.655186803898633 38 25.063440218482086 24.28705514844448 25.217511686181727 25.43199294689171 39 25.693193259498702 24.27666790313179 24.719543214456046 25.310595622913468 40 25.76530662937863 24.582943904340564 24.98918651457353 24.662562951707272 41 24.767300446719553 25.02417743721815 25.365576098649246 24.842946017413052 42 25.99776761316777 24.89243803801682 24.986503002460925 24.123291346354485 43 25.54084766971313 23.945215388498173 25.171748405725676 25.342188536063027 44 24.992349159202405 24.72182072788311 24.82595165198544 25.45987846092904 45 25.203424365350426 24.89295546258343 24.88487412993193 25.018746042134214 46 25.015864604378496 24.7103633292485 24.892855959990726 25.380916106382273 47 25.141934334298 24.52504741080377 25.25692581923153 25.076092435666702 48 26.043303383350068 25.089492245771805 24.220403967070034 24.646800403808093 49 25.090403964459767 25.223484429453112 24.457857742348533 25.228253863738587 50 25.441222838398907 25.14884067225377 24.37588926836894 25.03404722097839 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 199.0 1 128.5 2 58.0 3 156.5 4 255.0 5 259.5 6 264.0 7 220.0 8 176.0 9 245.0 10 314.0 11 498.5 12 683.0 13 1292.0 14 1901.0 15 2552.5 16 3204.0 17 3075.5 18 2947.0 19 2806.0 20 2665.0 21 3157.0 22 3649.0 23 4446.0 24 5243.0 25 6540.0 26 7837.0 27 10040.5 28 12244.0 29 14329.5 30 16415.0 31 18756.0 32 21097.0 33 24267.5 34 27438.0 35 31872.5 36 36307.0 37 43871.0 38 51435.0 39 57394.5 40 63354.0 41 69436.0 42 75518.0 43 78980.5 44 82443.0 45 90495.0 46 98547.0 47 105413.0 48 112279.0 49 116657.5 50 121036.0 51 117469.0 52 113902.0 53 113901.0 54 113900.0 55 114524.0 56 115148.0 57 111349.5 58 107551.0 59 98336.5 60 89122.0 61 77740.5 62 66359.0 63 57404.0 64 48449.0 65 40614.5 66 32780.0 67 28434.0 68 24088.0 69 21739.0 70 19390.0 71 15146.0 72 10902.0 73 9614.0 74 8326.0 75 6098.0 76 3870.0 77 3486.0 78 3102.0 79 2652.0 80 2202.0 81 1746.5 82 1291.0 83 1117.0 84 943.0 85 721.0 86 499.0 87 352.0 88 205.0 89 136.0 90 67.0 91 46.0 92 25.0 93 21.0 94 17.0 95 21.5 96 26.0 97 18.0 98 10.0 99 9.0 100 8.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.028085236041836405 2 0.0035106545052295507 3 1.9871629274884246E-4 4 0.0 5 6.623876424961415E-5 6 2.649550569984566E-4 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 5.299101139969132E-4 17 0.0 18 1.9871629274884246E-4 19 0.0 20 1.9871629274884246E-4 21 0.0 22 0.0 23 0.0 24 7.948651709953698E-4 25 1.324775284992283E-4 26 3.3119382124807077E-4 27 3.974325854976849E-4 28 0.001987162927488425 29 2.649550569984566E-4 30 9.273426994945981E-4 31 1.9871629274884246E-4 32 3.3119382124807077E-4 33 1.9871629274884246E-4 34 9.273426994945981E-4 35 1.324775284992283E-4 36 2.649550569984566E-4 37 0.002119640455987653 38 6.623876424961415E-5 39 6.623876424961415E-4 40 6.623876424961415E-5 41 0.0011922977564930548 42 0.006292682603713346 43 0.004570474733223377 44 0.0034444157409799364 45 0.002517073041485338 46 0.002649550569984566 47 8.611039352449841E-4 48 0.004106803383476078 49 0.00510038484722029 50 0.0014572528134915114 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1509690.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 54.238909329770294 #Duplication Level Percentage of deduplicated Percentage of total 1 77.53819713031338 42.05587243744923 2 13.537644413350705 14.685341357488008 3 3.9939949795866876 6.498897946840803 4 1.6285979217366804 3.533335000469126 5 0.8359475280795003 2.2670441089974815 6 0.5062563763558008 1.6475276216868204 7 0.3435520183652593 1.3043720741921014 8 0.23596817708299656 1.0238925249212665 9 0.19338970487811 0.9440322001375361 >10 1.0272105186851639 10.088819905118086 >50 0.08048960596845951 3.027023302598403 >100 0.066362469167071 7.306601826926851 >500 0.009445198466613429 3.4145610576116496 >1k 0.00294395796361977 2.2026786355627 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 2017 0.13360358749147178 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 1802 0.11936225317780473 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 1789 0.11850114924255974 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 1757 0.11638150878657207 No Hit TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCGGCGGCGTTATT 1674 0.1108836913538541 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCG 1657 0.10975763236161067 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 1626 0.10770423066987261 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGA 1592 0.10545211268538573 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 6.623876424961415E-5 6 0.0 0.0 0.0 0.0 6.623876424961415E-5 7 0.0 0.0 0.0 0.0 6.623876424961415E-5 8 0.0 0.0 0.0 0.0 6.623876424961415E-5 9 0.0 0.0 0.0 0.0 6.623876424961415E-5 10 0.0 0.0 0.0 0.0 6.623876424961415E-5 11 0.0 0.0 0.0 0.0 6.623876424961415E-5 12 0.0 0.0 0.0 0.0 6.623876424961415E-5 13 0.0 0.0 0.0 0.0 1.987162927488425E-4 14 0.0 0.0 0.0 6.623876424961415E-5 1.987162927488425E-4 15 0.0 0.0 0.0 6.623876424961415E-5 3.311938212480708E-4 16 0.0 0.0 0.0 1.324775284992283E-4 3.311938212480708E-4 17 0.0 0.0 0.0 2.649550569984566E-4 3.311938212480708E-4 18 0.0 0.0 0.0 4.6367134974729913E-4 3.311938212480708E-4 19 0.0 1.324775284992283E-4 0.0 5.961488782465274E-4 3.311938212480708E-4 20 0.0 1.324775284992283E-4 0.0 6.623876424961416E-4 3.311938212480708E-4 21 0.0 1.324775284992283E-4 0.0 6.623876424961416E-4 3.97432585497685E-4 22 0.0 1.324775284992283E-4 0.0 7.286264067457558E-4 4.6367134974729913E-4 23 6.623876424961415E-5 1.324775284992283E-4 0.0 0.0013247752849922833 4.6367134974729913E-4 24 6.623876424961415E-5 1.324775284992283E-4 0.0 0.00158973034199074 4.6367134974729913E-4 25 6.623876424961415E-5 1.324775284992283E-4 0.0 0.001987162927488425 4.6367134974729913E-4 26 6.623876424961415E-5 1.324775284992283E-4 0.0 0.0026495505699845666 4.6367134974729913E-4 27 6.623876424961415E-5 1.324775284992283E-4 0.0 0.0031132219197318655 4.6367134974729913E-4 28 6.623876424961415E-5 1.324775284992283E-4 0.0 0.003908087090727236 4.6367134974729913E-4 29 6.623876424961415E-5 1.324775284992283E-4 0.0 0.005762772489716432 4.6367134974729913E-4 30 6.623876424961415E-5 1.324775284992283E-4 0.0 0.008544800588200226 4.6367134974729913E-4 31 6.623876424961415E-5 1.324775284992283E-4 0.0 0.014241334313667045 4.6367134974729913E-4 32 6.623876424961415E-5 1.324775284992283E-4 0.0 0.02166007590962383 4.6367134974729913E-4 33 6.623876424961415E-5 1.324775284992283E-4 0.0 0.02755532592783949 4.6367134974729913E-4 34 6.623876424961415E-5 1.324775284992283E-4 0.0 0.034311679881300135 5.299101139969132E-4 35 6.623876424961415E-5 1.324775284992283E-4 0.0 0.04219409282700422 5.299101139969132E-4 36 6.623876424961415E-5 1.324775284992283E-4 0.0 0.053653399042187466 5.299101139969132E-4 37 6.623876424961415E-5 1.324775284992283E-4 0.0 0.07114043280408561 5.299101139969132E-4 38 6.623876424961415E-5 1.324775284992283E-4 0.0 0.09492014916969709 5.299101139969132E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 1905 0.0 25.762997 1 TACCGTG 70 3.2173644E-5 21.998823 7 GGTATCA 990 0.0 20.674463 1 ATACCGT 495 0.0 20.44335 6 GTATTAC 185 0.0 20.223843 1 TACCGTC 515 0.0 19.222275 7 ACCGTCG 510 0.0 18.979378 8 ATCGATT 105 1.79364E-6 18.85676 29 CGTCGTA 550 0.0 18.798994 10 CGCAATA 395 0.0 18.38181 36 CCGTCGT 535 0.0 18.092491 9 CGGATCG 110 2.798788E-6 17.999039 26 GTAATAC 135 5.5315468E-8 17.924969 3 ACGCTTA 100 2.4848177E-5 17.59906 17 CTCGACG 100 2.4848177E-5 17.59906 13 TACGAAT 430 0.0 17.397877 41 GTCGTAG 570 0.0 17.367493 11 CTAGCGG 420 0.0 17.285362 29 TCAACGC 2940 0.0 16.985487 4 ATCAACG 2955 0.0 16.973713 3 >>END_MODULE