##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062217_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 36869 Sequences flagged as poor quality 0 Sequence length 25 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 26.49429059643603 32.0 14.0 32.0 14.0 32.0 2 24.131926550760802 32.0 14.0 32.0 14.0 32.0 3 24.563861238438797 32.0 14.0 32.0 14.0 32.0 4 24.06807887385066 27.0 14.0 32.0 14.0 32.0 5 24.568906127098646 32.0 14.0 32.0 14.0 32.0 6 28.222490439122296 32.0 21.0 36.0 14.0 36.0 7 27.654425126800295 32.0 21.0 36.0 14.0 36.0 8 27.302476335132496 32.0 21.0 36.0 14.0 36.0 9 27.376929127451245 32.0 14.0 36.0 14.0 36.0 10 26.002956413246903 32.0 14.0 36.0 14.0 36.0 11 28.53049987794624 32.0 21.0 36.0 14.0 36.0 12 26.96091567441482 32.0 14.0 36.0 14.0 36.0 13 27.56188125525509 32.0 21.0 36.0 14.0 36.0 14 26.809569014619328 32.0 14.0 36.0 14.0 36.0 15 26.916569475711302 32.0 14.0 36.0 14.0 36.0 16 27.025631289158913 32.0 14.0 36.0 14.0 36.0 17 26.728905042176354 32.0 14.0 36.0 14.0 36.0 18 26.772763025848274 32.0 14.0 36.0 14.0 36.0 19 26.737231820770837 32.0 14.0 36.0 14.0 36.0 20 26.79871979169492 32.0 14.0 36.0 14.0 36.0 21 26.808863815129243 32.0 14.0 36.0 14.0 36.0 22 26.53361902953701 32.0 14.0 36.0 14.0 36.0 23 26.28715180775177 32.0 14.0 36.0 14.0 36.0 24 26.325530933846863 32.0 14.0 36.0 14.0 36.0 25 25.52540074317177 27.0 14.0 36.0 14.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 4 3.0 5 4.0 6 8.0 7 3.0 8 2.0 9 1.0 10 2.0 11 2.0 12 2.0 13 1.0 14 83.0 15 211.0 16 486.0 17 913.0 18 1550.0 19 2063.0 20 2495.0 21 2462.0 22 2258.0 23 2038.0 24 1758.0 25 1747.0 26 1691.0 27 1604.0 28 1538.0 29 1575.0 30 1638.0 31 1708.0 32 1898.0 33 2030.0 34 2720.0 35 2375.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.88445577585505 19.31161680544631 12.655618541321978 28.14830887737666 2 16.29010822099867 18.698635710217257 38.598822859312705 26.41243320947137 3 18.459952805880278 21.882882638531015 27.147468062600016 32.50969649298869 4 12.061950743191927 14.48410545730715 34.18411630682435 39.269827492676576 5 15.078676071622354 35.2197504069452 32.84319045035269 16.85838307107976 6 35.67241940735917 34.59513730598068 15.440138934114838 14.292304352545315 7 30.921231203517724 29.230226372075347 19.703056294446554 20.14548612996037 8 27.404511768059287 32.478214838341884 18.785460270923256 21.331813122675573 9 25.912151156477357 13.777283092626776 18.232164187208166 42.07840156368769 10 15.485692566650378 25.15339088885269 30.952380952380953 28.40853559211598 11 37.54989003828297 20.1786538513752 21.5687871629877 20.70266894735413 12 24.58522279849024 22.49979634507291 28.31618106280718 24.598799793629674 13 28.80145541435864 18.312153796024763 25.029868578255677 27.856522211360925 14 23.35695089176643 18.190949317262533 25.42552325107908 33.026576539891956 15 25.3713106519319 26.147872600396425 21.865920877569305 26.614895870102366 16 25.82396698702286 25.6882228375957 23.193245371124505 25.294564804256936 17 23.304555573654774 26.388662648639844 25.54976380518 24.757017972525382 18 24.433946896888745 24.322636694358472 26.157897594613672 25.085518814139114 19 25.090928831225234 24.82492807122306 24.8357852451007 25.248357852451008 20 25.238844859407227 23.887200086852676 24.723157094777985 26.150797958962112 21 25.961512363271176 23.40200309421057 25.147246424015417 25.48923811850284 22 24.631544662486768 23.809136063838448 25.81494449420514 25.74437477946964 23 23.068154059115706 24.11584290095812 26.420215509051925 26.395787530874248 24 23.850621505726536 24.293003311078543 25.72870867936818 26.12766650382674 25 24.489685124864277 23.797502714440824 25.719326818675352 25.993485342019547 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 3.0 1 3.0 2 9.0 3 15.0 4 15.0 5 15.0 6 31.5 7 48.0 8 48.0 9 48.0 10 49.0 11 50.0 12 50.0 13 50.0 14 79.5 15 109.0 16 109.0 17 109.0 18 201.0 19 293.0 20 293.0 21 293.0 22 428.0 23 563.0 24 563.0 25 563.0 26 877.0 27 1191.0 28 1191.0 29 1191.0 30 1419.0 31 1647.0 32 1647.0 33 1647.0 34 2000.0 35 2353.0 36 2353.0 37 2353.0 38 2554.0 39 2755.0 40 2755.0 41 2755.0 42 3096.0 43 3437.0 44 3437.0 45 3437.0 46 3845.5 47 4254.0 48 4254.0 49 4254.0 50 4444.5 51 4635.0 52 4635.0 53 4635.0 54 4345.5 55 4056.0 56 4056.0 57 4056.0 58 3864.5 59 3673.0 60 3673.0 61 3673.0 62 3293.5 63 2914.0 64 2914.0 65 2914.0 66 2516.0 67 2118.0 68 2118.0 69 2118.0 70 1667.0 71 1216.0 72 1216.0 73 1216.0 74 953.5 75 691.0 76 691.0 77 691.0 78 580.5 79 470.0 80 470.0 81 470.0 82 342.0 83 214.0 84 214.0 85 214.0 86 156.5 87 99.0 88 99.0 89 99.0 90 60.0 91 21.0 92 21.0 93 21.0 94 14.0 95 7.0 96 7.0 97 7.0 98 22.0 99 37.0 100 37.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0027123057311020096 5 0.024410751579918087 6 0.04610919742873417 7 0.07323225473975427 8 0.0867937833952643 9 0.08950608912636633 10 0.09493070058857034 11 0.10306761778187637 12 0.1139168407062844 13 0.1112045349751824 14 0.0867937833952643 15 0.10849222924408039 16 0.09493070058857034 17 0.09493070058857034 18 0.09493070058857034 19 0.07323225473975427 20 0.06780764327755025 21 0.07051994900865226 22 0.07051994900865226 23 0.07051994900865226 24 0.06238303181534623 25 0.07865686620195829 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 36869.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 79.19932734817868 #Duplication Level Percentage of deduplicated Percentage of total 1 91.97602739726027 72.84439502020668 2 4.88013698630137 7.730071333640728 3 1.0821917808219177 2.5712658330847056 4 0.5273972602739726 1.670780330358838 5 0.3219178082191781 1.2747836936179446 6 0.2226027397260274 1.0577992351297838 7 0.1506849315068493 0.835390165179419 8 0.1232876712328767 0.7811440505573788 9 0.10273972602739725 0.7323225473975427 >10 0.5753424657534246 8.334915511676476 >50 0.03424657534246575 1.7928340882584284 >100 0.003424657534246575 0.37429819089207733 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 138 0.37429819089207733 No Hit TATCAACGCAGAGTACTTTTTTTTT 83 0.22512137568146678 No Hit CTCCTGGTGGTGCCCTTCCGTCAAT 80 0.21698445848816078 No Hit ACCATACTCCCCCCGGAACCCAAAG 72 0.1952860126393447 No Hit GCGCAAGACGGACCAGAGCGAAAGC 66 0.17901217825273266 No Hit GGCTCCACTCCTGGTGGTGCCCTTC 64 0.1735875667905286 No Hit CTCCCGACCCGGGGAGGTAGTGACG 64 0.1735875667905286 No Hit CTCCACTCCTGGTGGTGCCCTTCCG 62 0.1681629553283246 No Hit GTCAATCCTGTCCGTGTCCGGGCCG 60 0.1627383438661206 No Hit ATACAGGACTCTTTCGAGGCCCTGT 56 0.15188912094171253 No Hit TTCGTATTGCGCCGCTAGAGGTGAA 54 0.14646450947950854 No Hit GGTATCAACGCAGAGTACTTTTTTT 48 0.13019067509289647 No Hit GTTCAAAGCAGGCCCGAGCCGCCTG 45 0.12205375789959044 No Hit CTATTGGAGCTGGAATTACCGCGGC 44 0.11934145216848843 No Hit CTTCGGGCCCCGCGGGACACTCAGC 40 0.10849222924408039 No Hit ACGCAGAGTACTTTTTTTTTTTTTT 39 0.10577992351297838 No Hit CTCTAGATAACCTCGGGCCGATCGC 38 0.10306761778187637 No Hit GAATAGGACCGCGGTTCTATTTTGT 37 0.10035531205077437 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.00271230573110201 0.0 8 0.0 0.0 0.0 0.00271230573110201 0.0 9 0.0 0.0 0.0 0.00271230573110201 0.0 10 0.0 0.0 0.0 0.00271230573110201 0.0 11 0.0 0.0 0.0 0.00271230573110201 0.0 12 0.0 0.0 0.0 0.00271230573110201 0.0 13 0.0 0.0 0.0 0.00271230573110201 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 45 3.390158E-5 16.88889 1 AGTACAT 85 5.0037866E-5 11.176471 12 GAGTACA 85 5.0037866E-5 11.176471 11 ACATGGG 95 1.2632458E-5 11.0 15 GTACATG 90 8.949975E-5 10.555555 13 TACATGG 90 8.949975E-5 10.555555 14 TATCAAC 105 3.8173406E-5 9.952381 1 TCAACGC 110 6.361394E-5 9.5 3 ATCAACG 110 6.361394E-5 9.5 2 AACGCAG 115 1.0341176E-4 9.086956 5 CAACGCA 115 1.0341176E-4 9.086956 4 ACGCAGA 125 2.5576688E-4 8.36 6 AGAGTAC 125 2.5576688E-4 8.36 10 CAGAGTA 130 3.9049602E-4 8.038462 9 GCAGAGT 130 3.9049602E-4 8.038462 8 CGCAGAG 140 8.6416E-4 7.464286 7 >>END_MODULE