##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062217_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 36869 Sequences flagged as poor quality 0 Sequence length 50 %GC 52 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.051235455260517 32.0 32.0 32.0 21.0 32.0 2 28.61203178822317 32.0 32.0 32.0 14.0 32.0 3 30.28346307195747 32.0 32.0 32.0 21.0 32.0 4 30.84895169383493 32.0 32.0 32.0 32.0 32.0 5 30.552550923540103 32.0 32.0 32.0 32.0 32.0 6 34.111231658032494 36.0 36.0 36.0 32.0 36.0 7 34.124332094713715 36.0 36.0 36.0 32.0 36.0 8 33.82616832569367 36.0 36.0 36.0 32.0 36.0 9 34.24719954433264 36.0 36.0 36.0 32.0 36.0 10 33.73175296319401 36.0 36.0 36.0 32.0 36.0 11 34.49982370012748 36.0 36.0 36.0 32.0 36.0 12 34.11885323713689 36.0 36.0 36.0 32.0 36.0 13 34.33930944696086 36.0 36.0 36.0 32.0 36.0 14 34.10404404784507 36.0 36.0 36.0 32.0 36.0 15 34.058097588760205 36.0 36.0 36.0 32.0 36.0 16 34.10138598822859 36.0 36.0 36.0 32.0 36.0 17 33.998643847134446 36.0 36.0 36.0 32.0 36.0 18 34.120426374460926 36.0 36.0 36.0 32.0 36.0 19 34.02465485909572 36.0 36.0 36.0 32.0 36.0 20 34.08082671078684 36.0 36.0 36.0 32.0 36.0 21 34.087119260083 36.0 36.0 36.0 32.0 36.0 22 34.04865876481597 36.0 36.0 36.0 32.0 36.0 23 33.98106810599691 36.0 36.0 36.0 32.0 36.0 24 33.86001790121782 36.0 36.0 36.0 32.0 36.0 25 33.917166182972146 36.0 36.0 36.0 32.0 36.0 26 33.836095364669504 36.0 36.0 36.0 32.0 36.0 27 33.79657707016735 36.0 36.0 36.0 32.0 36.0 28 33.66570831864168 36.0 36.0 36.0 27.0 36.0 29 33.667552686538826 36.0 36.0 36.0 27.0 36.0 30 33.61799886083159 36.0 36.0 36.0 27.0 36.0 31 33.67430632780927 36.0 36.0 36.0 32.0 36.0 32 33.584339146708615 36.0 36.0 36.0 27.0 36.0 33 33.526485665464214 36.0 36.0 36.0 21.0 36.0 34 33.4272695218205 36.0 36.0 36.0 21.0 36.0 35 33.458786514415905 36.0 36.0 36.0 21.0 36.0 36 33.38303181534623 36.0 36.0 36.0 21.0 36.0 37 33.34712088746644 36.0 36.0 36.0 21.0 36.0 38 33.34527651956929 36.0 36.0 36.0 21.0 36.0 39 33.35729203395807 36.0 36.0 36.0 21.0 36.0 40 33.29501749437197 36.0 36.0 36.0 21.0 36.0 41 33.193441644742194 36.0 36.0 36.0 21.0 36.0 42 33.126474816241284 36.0 36.0 36.0 21.0 36.0 43 33.22048333288128 36.0 36.0 36.0 21.0 36.0 44 33.0718761018742 36.0 36.0 36.0 21.0 36.0 45 33.04157964685779 36.0 36.0 36.0 14.0 36.0 46 32.94692017684233 36.0 36.0 36.0 14.0 36.0 47 33.06482410697334 36.0 36.0 36.0 14.0 36.0 48 32.97287694268898 36.0 36.0 36.0 14.0 36.0 49 32.872141907835854 36.0 36.0 36.0 14.0 36.0 50 32.15031598361767 36.0 32.0 36.0 14.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 1.0 20 0.0 21 3.0 22 15.0 23 20.0 24 59.0 25 107.0 26 232.0 27 410.0 28 799.0 29 1278.0 30 2024.0 31 3240.0 32 4621.0 33 7085.0 34 9558.0 35 7417.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.26479683176911 18.49671784299897 13.418868333966255 24.819616991265665 2 19.67831181512423 19.339264402734077 34.99511771726158 25.987306064880112 3 22.75624508394586 20.686755811115027 27.470232444601155 29.086766660337954 4 16.523366513873444 15.698825571618432 34.88567631343405 32.89213160107407 5 21.40551682985706 30.936559168949522 30.223222761669692 17.43470123952372 6 37.267080745341616 34.72022566383683 13.789362336922617 14.223331253898937 7 31.468171092245516 28.82096069868996 18.169736092652364 21.54113211641216 8 28.883343730505302 32.412053486669016 16.458271176326996 22.246331606498686 9 25.58517996148526 13.097724375491607 16.108383737014837 45.2087119260083 10 15.88597466706447 24.888117388592043 29.33901109333044 29.886896851013045 11 40.939542705253736 19.44723209200141 18.858661748352272 20.75456345439258 12 24.836583579701106 22.15682551737232 27.06067427920475 25.945916623721825 13 30.293742710678345 17.469961214028046 23.192926306653288 29.04336976864032 14 23.651305975209524 17.714068729827225 23.39906154221704 35.23556375274621 15 26.523637744446553 25.36005858580379 20.499606715668993 27.616696954080666 16 26.73519759147251 25.66926143914942 21.400092218394857 26.195448750983214 17 24.380916216875967 26.358187094849335 23.469581491225693 25.791315197049013 18 26.1818872223277 23.949659605630746 24.81488513385229 25.053568038189265 19 26.355474789118226 24.606037592557435 23.86286582223548 25.175621796088855 20 26.64026689088394 23.201063223846592 23.3502400390572 26.808429846212267 21 27.462095527407847 23.556375274620954 23.087146383140308 25.894382814830884 22 25.84556131167105 23.65401828094063 24.283273210556295 26.217147196832023 23 24.698255987414903 23.827605847731157 25.140361821584527 26.333776343269417 24 24.48127152892674 24.679269847297185 24.08798719791695 26.751471425859126 25 25.064417261113675 23.984919580135074 24.10426103230356 26.846402126447693 26 25.18104640755106 24.315820879329518 24.283273210556295 26.219859502563132 27 25.539070764056525 23.96864574574846 25.069841872575875 25.42244161761914 28 25.256990968021913 23.984919580135074 25.65569991049391 25.1023895413491 29 25.35734628007269 24.2914101277496 24.421600802842498 25.929642789335215 30 25.189183324744363 24.459573083077924 24.817597439583388 25.53364615259432 31 26.127641107705664 24.367354688220455 24.052727223412624 25.45227698066126 32 26.040847324310395 24.50839458623776 23.569936803276466 25.880821286175376 33 24.497545363313353 24.220890178740948 24.513819197699966 26.767745260245736 34 25.379044725921506 24.296834739211803 24.408039274186986 25.916081260679704 35 26.40972090374027 23.789633567495727 24.326670102253924 25.473975426510076 36 24.35650546529605 24.890829694323145 24.2886978220185 26.46396701836231 37 26.442268572513495 23.933385771244133 24.47855922319564 25.145786433046734 38 25.44956467493016 23.90083810247091 25.015595757953836 25.634001464645095 39 25.89980742629309 24.231739401665354 23.515690688654427 26.352762483387128 40 26.076107298814723 25.12951259866012 23.724538229949278 25.069841872575875 41 24.76063901923025 24.44058694296021 25.107814152811304 25.69095988499824 42 25.799452114242317 25.539070764056525 24.123247172421276 24.538229949279884 43 25.50450254963654 23.730606488011283 25.013561896495606 25.75132906585657 44 25.534338721926876 24.65824020831073 24.077791038298795 25.7296300314636 45 25.465838509316768 24.961349643331797 24.055439529143722 25.51737231820771 46 24.719954433263716 24.79318668800347 24.32124549079172 26.16561338794109 47 25.140361821584527 24.22631479020315 24.934226586020777 25.699096802191544 48 26.3317782358685 25.561462514918087 23.801128349788435 24.305630899424976 49 25.25564868310413 24.827081129465377 24.108281118615565 25.80898906881493 50 26.024573489923785 24.64129756706176 24.106973338034663 25.227155604979796 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 0.0 1 1.0 2 2.0 3 1.5 4 1.0 5 3.0 6 5.0 7 4.5 8 4.0 9 5.0 10 6.0 11 11.0 12 16.0 13 19.5 14 23.0 15 27.5 16 32.0 17 48.5 18 65.0 19 73.0 20 81.0 21 109.0 22 137.0 23 164.5 24 192.0 25 246.5 26 301.0 27 353.5 28 406.0 29 463.5 30 521.0 31 553.0 32 585.0 33 671.0 34 757.0 35 853.5 36 950.0 37 1083.5 38 1217.0 39 1335.0 40 1453.0 41 1561.5 42 1670.0 43 1678.5 44 1687.0 45 1749.5 46 1812.0 47 2007.5 48 2203.0 49 2278.0 50 2353.0 51 2261.5 52 2170.0 53 2288.0 54 2406.0 55 2494.5 56 2583.0 57 2527.5 58 2472.0 59 2357.5 60 2243.0 61 2114.0 62 1985.0 63 1744.5 64 1504.0 65 1350.0 66 1196.0 67 1075.5 68 955.0 69 905.5 70 856.0 71 723.0 72 590.0 73 516.0 74 442.0 75 357.5 76 273.0 77 248.5 78 224.0 79 203.5 80 183.0 81 144.5 82 106.0 83 95.0 84 84.0 85 68.5 86 53.0 87 43.0 88 33.0 89 19.0 90 5.0 91 6.0 92 7.0 93 5.0 94 3.0 95 4.5 96 6.0 97 4.0 98 2.0 99 5.5 100 9.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.00813691719330603 2 0.0027123057311020096 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0027123057311020096 44 0.0027123057311020096 45 0.0 46 0.0 47 0.0 48 0.0027123057311020096 49 0.005424611462204019 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 36869.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 84.25506523095282 #Duplication Level Percentage of deduplicated Percentage of total 1 93.61962400206026 78.87927527190864 2 3.9821014679371625 6.7102443787463715 3 0.9625289724439866 2.432938240798503 4 0.40239505536955966 1.356152865551005 5 0.20602626834921456 0.8679378339526431 6 0.14808138037599794 0.7485963817841547 7 0.09657481328869431 0.569584203531422 8 0.09657481328869431 0.6509533754644824 9 0.06760236930208602 0.5126257831782799 >10 0.3991758949266031 6.064715614744094 >50 0.016095802214782386 0.8869239740703573 >100 0.0032191604429564775 0.3200520762700372 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 118 0.3200520762700372 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 81 0.2196967642192628 No Hit GTATTGCGCCGCTAGAGGTGAAATTCTTGGACCGGCGCAAGACGGACCAG 65 0.17629987252163062 No Hit TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCGGCGGCGTTATT 62 0.1681629553283246 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATGGTCGGAACTACG 61 0.1654506495972226 No Hit CTCCCGACCCGGGGAGGTAGTGACGAAAAATAACAATACAGGACTCTTTC 58 0.15731373240391658 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCG 50 0.1356152865551005 No Hit GTATCAACGCAGAGTACATGGGTACCTGGTTGATCCTGCCAGTAGCATAT 49 0.13290298082399848 No Hit TTCGTATTGCGCCGCTAGAGGTGAAATTCTTGGACCGGCGCAAGACGGAC 49 0.13290298082399848 No Hit GGCTCCACTCCTGGTGGTGCCCTTCCGTCAATTCCTTTAAGTTTCAGCTT 41 0.1112045349751824 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 41 0.1112045349751824 No Hit ATACAGGACTCTTTCGAGGCCCTGTAATTGGAATGAGTCCACTTTAAATC 39 0.10577992351297838 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 14 0.0 0.0 0.0 0.0 0.0 15 0.0 0.0 0.0 0.0 0.0 16 0.0 0.0 0.0 0.0 0.0 17 0.0 0.0 0.0 0.0 0.0 18 0.0 0.0 0.0 0.0 0.0 19 0.0 0.0 0.0 0.0 0.0 20 0.0 0.0 0.0 0.0 0.0 21 0.0 0.0 0.0 0.0 0.0 22 0.0 0.0 0.0 0.0 0.0 23 0.0 0.0 0.0 0.0 0.0 24 0.0 0.0 0.0 0.0 0.0 25 0.0 0.0 0.0 0.0 0.0 26 0.0 0.0 0.0 0.0 0.0 27 0.0 0.0 0.0 0.0 0.0 28 0.0 0.0 0.0 0.0 0.0 29 0.0 0.0 0.0 0.0 0.0 30 0.0 0.0 0.0 0.0 0.0 31 0.0 0.0 0.0 0.00271230573110201 0.0 32 0.0 0.0 0.0 0.00542461146220402 0.0 33 0.0 0.0 0.0 0.00542461146220402 0.0 34 0.0 0.0 0.0 0.00542461146220402 0.0 35 0.0 0.0 0.0 0.00813691719330603 0.0 36 0.0 0.0 0.0 0.00813691719330603 0.0 37 0.0 0.0 0.0 0.00813691719330603 0.0 38 0.0 0.0 0.0 0.013561528655510049 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAGCGGC 20 7.7575806E-4 44.0 30 TCTAGCG 20 7.7575806E-4 44.0 28 TTTCACC 20 7.7575806E-4 44.0 21 AGAATTT 20 7.7575806E-4 44.0 17 GCAATAC 20 7.7575806E-4 44.0 37 CCTCTAG 20 7.7575806E-4 44.0 26 CACCTCT 20 7.7575806E-4 44.0 24 AGCGGCG 20 7.7575806E-4 44.0 31 ACCTCTA 20 7.7575806E-4 44.0 25 CTAGCGG 20 7.7575806E-4 44.0 29 CTTGCGC 20 7.7575806E-4 44.0 3 GCGCAAT 20 7.7575806E-4 44.0 35 CGCAATA 20 7.7575806E-4 44.0 36 CGCCGGT 25 4.3592616E-5 44.0 7 AATTTCA 25 0.0023234098 35.2 19 TCGGAAC 25 0.0023234098 35.2 40 CGGAACT 25 0.0023234098 35.2 41 TCTTGCG 25 0.0023234098 35.2 2 AATACGA 25 0.0023234098 35.2 39 CGGTCCA 25 0.0023234098 35.2 10 >>END_MODULE