FastQCFastQC Report
Thu 2 Feb 2017
SRR4062213_2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR4062213_2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10335
Sequences flagged as poor quality0
Sequence length25
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTT580.5611998064828254No Hit
TATCAACGCAGAGTACTTTTTTTTT540.5224963715529753No Hit
GGTATCAACGCAGAGTACTTTTTTT160.1548137397194001No Hit
ACGCAGAGTACTTTTTTTTTTTTTT110.10643444605708757No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)