Basic Statistics
Measure | Value |
---|---|
Filename | SRR4062212_1.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 2302752 |
Sequences flagged as poor quality | 0 |
Sequence length | 50 |
%GC | 50 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GGTATCA | 1095 | 0.0 | 31.753788 | 1 |
GTATCAA | 2575 | 0.0 | 25.125961 | 1 |
ATACCGT | 300 | 0.0 | 21.266102 | 6 |
TACCGTA | 95 | 1.5985002E-5 | 18.525822 | 7 |
ATTATAC | 240 | 0.0 | 17.416204 | 3 |
CGTCGTA | 255 | 0.0 | 17.254442 | 10 |
TACCGTC | 310 | 0.0 | 17.031803 | 7 |
TATCAAC | 3785 | 0.0 | 16.97328 | 2 |
TCTAGCG | 185 | 4.2382453E-10 | 16.648205 | 28 |
TCAACGC | 3845 | 0.0 | 16.420889 | 4 |
ATCAACG | 3885 | 0.0 | 16.308447 | 3 |
GTATAAA | 360 | 0.0 | 15.893642 | 1 |
CAACGCA | 3975 | 0.0 | 15.883854 | 5 |
AACGCAG | 4100 | 0.0 | 15.560561 | 6 |
CGCAATA | 205 | 1.8117134E-9 | 15.024642 | 36 |
ACCGTCG | 295 | 0.0 | 14.914858 | 8 |
GTATATA | 400 | 0.0 | 14.304277 | 1 |
TATACTG | 480 | 0.0 | 14.207955 | 5 |
CTTACAC | 390 | 0.0 | 14.102189 | 3 |
TACGCTA | 190 | 1.7554885E-7 | 13.894366 | 9 |