##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062212_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2302752 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.294410340323232 32.0 32.0 32.0 32.0 32.0 2 31.456441683689775 32.0 32.0 32.0 32.0 32.0 3 31.57499157529773 32.0 32.0 32.0 32.0 32.0 4 31.652511429802253 32.0 32.0 32.0 32.0 32.0 5 31.624131039729853 32.0 32.0 32.0 32.0 32.0 6 35.270069898973055 36.0 36.0 36.0 36.0 36.0 7 35.27927366907075 36.0 36.0 36.0 36.0 36.0 8 35.22532300482206 36.0 36.0 36.0 36.0 36.0 9 35.3142392233293 36.0 36.0 36.0 36.0 36.0 10 35.19992383026917 36.0 36.0 36.0 36.0 36.0 11 35.31180257361626 36.0 36.0 36.0 36.0 36.0 12 35.24503333402816 36.0 36.0 36.0 36.0 36.0 13 35.273007688192216 36.0 36.0 36.0 36.0 36.0 14 35.24183932963689 36.0 36.0 36.0 36.0 36.0 15 35.21778854171009 36.0 36.0 36.0 36.0 36.0 16 35.229480204555244 36.0 36.0 36.0 36.0 36.0 17 35.21598374466725 36.0 36.0 36.0 36.0 36.0 18 35.20613813385028 36.0 36.0 36.0 36.0 36.0 19 35.19983046372341 36.0 36.0 36.0 36.0 36.0 20 35.20445536471144 36.0 36.0 36.0 36.0 36.0 21 35.196044993121276 36.0 36.0 36.0 36.0 36.0 22 35.17896325787579 36.0 36.0 36.0 36.0 36.0 23 35.145698711802225 36.0 36.0 36.0 36.0 36.0 24 35.13506230805575 36.0 36.0 36.0 36.0 36.0 25 35.122754860271534 36.0 36.0 36.0 36.0 36.0 26 35.0856397041453 36.0 36.0 36.0 36.0 36.0 27 35.0692241283473 36.0 36.0 36.0 36.0 36.0 28 35.04906607398452 36.0 36.0 36.0 36.0 36.0 29 35.03749513625436 36.0 36.0 36.0 36.0 36.0 30 35.01748777115382 36.0 36.0 36.0 36.0 36.0 31 35.013635424049134 36.0 36.0 36.0 36.0 36.0 32 34.99701357332444 36.0 36.0 36.0 36.0 36.0 33 34.975861490946485 36.0 36.0 36.0 36.0 36.0 34 34.96704204360695 36.0 36.0 36.0 36.0 36.0 35 34.9581344408777 36.0 36.0 36.0 36.0 36.0 36 34.93330675643752 36.0 36.0 36.0 36.0 36.0 37 34.92382983491058 36.0 36.0 36.0 36.0 36.0 38 34.915734303998 36.0 36.0 36.0 36.0 36.0 39 34.90198901140896 36.0 36.0 36.0 36.0 36.0 40 34.883591459262654 36.0 36.0 36.0 32.0 36.0 41 34.859957129556285 36.0 36.0 36.0 32.0 36.0 42 34.83901045357902 36.0 36.0 36.0 32.0 36.0 43 34.8281369422326 36.0 36.0 36.0 32.0 36.0 44 34.79308236405831 36.0 36.0 36.0 32.0 36.0 45 34.77877904350968 36.0 36.0 36.0 32.0 36.0 46 34.75952729603535 36.0 36.0 36.0 32.0 36.0 47 34.738047345089704 36.0 36.0 36.0 32.0 36.0 48 34.71501446964328 36.0 36.0 36.0 32.0 36.0 49 34.70018699364934 36.0 36.0 36.0 32.0 36.0 50 34.29427441600311 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 1.0 18 1.0 19 7.0 20 28.0 21 60.0 22 157.0 23 406.0 24 1033.0 25 2506.0 26 5008.0 27 9608.0 28 16785.0 29 27221.0 30 40642.0 31 61010.0 32 92939.0 33 158538.0 34 364341.0 35 1522461.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.0176401748379 17.505423502335777 12.250077975063618 26.226858347762704 2 16.42087654094731 19.15399788590671 37.07402192785504 27.35110364529093 3 19.122240036686602 22.398412679112088 28.092522499205298 30.386824784996016 4 13.430023480610801 15.422336153583258 33.88968238424389 37.25795798156205 5 15.19620871027362 35.90529939828519 32.95886834535373 15.939623546087464 6 36.12392671712232 33.57901081664168 15.902955946547342 14.394106519688652 7 31.477162977168188 29.647743222023042 19.38237378580064 19.492720015008132 8 28.493776142632814 33.45171342810689 18.199224232570423 19.85528619668987 9 26.805361584747295 14.941860869081863 18.25915252706327 39.99362501910757 10 17.0049215047567 26.809932988846818 30.57699247552167 25.60815303087481 11 37.15875613179361 21.377030613804703 21.335558496963632 20.128654757438056 12 24.61806568835897 23.237977863009128 28.160435861091425 23.983520587540475 13 29.892580703436582 19.483861049735275 24.58271667986826 26.040841566959884 14 23.572881491363376 18.83481156459749 24.862295201567516 32.73001174247162 15 25.461751851697446 26.758634885563016 21.69273981740109 26.086873445338448 16 25.94787409042824 25.851206306248404 23.051879246043395 25.14904035727996 17 24.6136796320229 26.01461208154417 24.550537791303622 24.821170495129305 18 25.049603799288416 25.355803307962187 25.12529600516253 24.469296887586868 19 25.869394533149904 24.948235849974292 24.911280068370367 24.27108954850544 20 26.019553151472437 24.415904642668394 24.793757374338238 24.770784831520935 21 26.216795664659937 24.28514788194458 24.66934086172657 24.828715591668914 22 26.133556718222373 24.1196620391601 24.729019885771457 25.01776135684607 23 25.196547435416406 24.316947721682578 25.058842636983925 25.427662205917095 24 25.147271295765925 24.558576954327552 24.97200054022998 25.32215120967654 25 25.363424955867885 24.29348451521988 24.956779843187153 25.38631068572508 26 25.140701701969476 24.76940554399447 25.07013371872861 25.019759035307445 27 25.363805411114228 24.645704989964138 24.855498358044454 25.13499124087718 28 25.45565718424922 24.502348963268624 24.879121108186062 25.162872744296088 29 25.16239307331334 24.886244509815672 24.938660190919883 25.012702225951106 30 25.313953437875913 24.718312611552378 24.891976045823867 25.075757904747842 31 25.481708328592607 24.468568341568442 24.726217700463188 25.323505629375763 32 25.314310752812847 24.656571723127737 24.65791794720804 25.37119957685137 33 25.068765606340243 24.603148409510368 24.921680599283466 25.40640538486592 34 25.58557643076851 24.466948158512654 24.862391655820847 25.08508375489799 35 25.46037406627823 24.61520957360926 24.96131793896594 24.963098421146572 36 25.235306021593352 24.72604447038449 24.871349249982412 25.16730025803975 37 25.665639904998848 24.42032406178983 24.74554969820329 25.168486335008026 38 25.174747432637123 24.549321854893623 25.009119523074997 25.266811189394257 39 25.528164503228545 24.560577642537865 24.66671211978431 25.244545734449282 40 25.587678031778538 24.60559096974963 24.805829901565478 25.000901096906347 41 25.170016033185043 24.818519284117418 24.912234379804094 25.099230302893442 42 25.58244268510356 24.653765476867758 24.667141486039874 25.096650351988814 43 25.47160019438566 24.39839679602404 24.748082526179743 25.381920483410557 44 25.127190908178914 24.639576903216785 24.851203465933246 25.38202872267106 45 25.230794485425356 24.763125689951526 24.7948276326292 25.211252191993914 46 25.45153633092369 24.50664308848679 24.679701254269997 25.362119326319522 47 25.23528655626988 24.78408180919641 24.856648039452406 25.123983595081306 48 25.466710847512243 24.93840810854591 24.55637118337642 25.038509860565426 49 25.32030208410237 24.761689690663445 24.584981782018268 25.333026443215918 50 25.240531076984276 24.98422515663019 24.683927725378325 25.09131604100721 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 78.0 1 84.5 2 91.0 3 210.0 4 329.0 5 364.0 6 399.0 7 315.5 8 232.0 9 319.0 10 406.0 11 687.5 12 969.0 13 1828.0 14 2687.0 15 3391.0 16 4095.0 17 3873.0 18 3651.0 19 3458.5 20 3266.0 21 3877.5 22 4489.0 23 5726.0 24 6963.0 25 8848.5 26 10734.0 27 13349.5 28 15965.0 29 19219.0 30 22473.0 31 27077.0 32 31681.0 33 36909.0 34 42137.0 35 49339.5 36 56542.0 37 64564.5 38 72587.0 39 82069.0 40 91551.0 41 100361.0 42 109171.0 43 117887.0 44 126603.0 45 137594.0 46 148585.0 47 157815.0 48 167045.0 49 174545.0 50 182045.0 51 184500.0 52 186955.0 53 187173.5 54 187392.0 55 183780.5 56 180169.0 57 172039.5 58 163910.0 59 152253.5 60 140597.0 61 123922.5 62 107248.0 63 93141.5 64 79035.0 65 66245.5 66 53456.0 67 45203.5 68 36951.0 69 30778.5 70 24606.0 71 19391.5 72 14177.0 73 11935.0 74 9693.0 75 7569.5 76 5446.0 77 4591.0 78 3736.0 79 3019.5 80 2303.0 81 1733.5 82 1164.0 83 880.5 84 597.0 85 455.5 86 314.0 87 208.0 88 102.0 89 71.5 90 41.0 91 33.0 92 25.0 93 23.0 94 21.0 95 18.5 96 16.0 97 14.5 98 13.0 99 12.0 100 11.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.03187490446213921 2 0.004776893039285168 3 1.737052014285516E-4 4 4.34263003571379E-5 5 0.0 6 1.737052014285516E-4 7 0.0 8 0.0 9 0.0 10 4.34263003571379E-5 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 8.685260071427578E-4 17 0.0 18 2.1713150178568946E-4 19 0.0 20 1.302789010714137E-4 21 1.302789010714137E-4 22 0.0 23 0.0 24 0.001259362710356999 25 3.0398410249996526E-4 26 3.474104028571032E-4 27 4.342630035713789E-4 28 0.0014764942121426885 29 2.605578021428274E-4 30 9.553786078570337E-4 31 4.342630035713789E-4 32 6.513945053570685E-4 33 8.68526007142758E-5 34 9.119523074998958E-4 35 2.1713150178568946E-4 36 2.605578021428274E-4 37 0.0018673309153569293 38 0.0 39 5.645419046427926E-4 40 1.302789010714137E-4 41 0.001215936409999861 42 0.005298008643570823 43 0.004907171940356582 44 0.0048203193396423065 45 0.0023450202192854463 46 0.002518725420713998 47 0.001215936409999861 48 0.0041254985339281005 49 0.0035609566292853076 50 0.0015199205124998263 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 2302752.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 57.643004029507075 #Duplication Level Percentage of deduplicated Percentage of total 1 73.99039521268557 42.65028649389656 2 14.699639274086653 16.94662731816955 3 4.906823761051574 8.485321854911309 4 2.1705150765339987 5.004600372110207 5 1.2111814147842834 3.490806758643726 6 0.731839116588959 2.5311243087892956 7 0.4790379089511903 1.9329228881172074 8 0.33114291528559653 1.5270457920120286 9 0.253780390265459 1.3165797652813556 >10 1.1536877908585579 11.327317586782181 >50 0.04909348294767263 1.9204234768354442 >100 0.021422415372325254 2.241457733479964 >500 0.0013653858204998107 0.5497977333318366 >1k 7.585476780551414E-5 0.07568791763934364 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 3.0398410249996526E-4 2 0.0 0.0 0.0 0.0 3.0398410249996526E-4 3 0.0 0.0 0.0 0.0 3.0398410249996526E-4 4 0.0 0.0 0.0 0.0 3.4741040285710313E-4 5 0.0 0.0 0.0 0.0 3.4741040285710313E-4 6 0.0 0.0 0.0 0.0 3.4741040285710313E-4 7 0.0 0.0 0.0 0.0 3.9083670321424105E-4 8 0.0 0.0 0.0 0.0 4.342630035713789E-4 9 0.0 0.0 0.0 0.0 4.342630035713789E-4 10 0.0 0.0 0.0 0.0 4.7768930392851685E-4 11 0.0 0.0 0.0 0.0 4.7768930392851685E-4 12 0.0 0.0 0.0 0.0 9.119523074998958E-4 13 0.0 0.0 0.0 0.0 0.0010422312085713095 14 0.0 0.0 0.0 0.0 0.0010422312085713095 15 0.0 0.0 0.0 1.302789010714137E-4 0.0011725101096427232 16 0.0 0.0 0.0 1.7370520142855156E-4 0.0011725101096427232 17 0.0 0.0 0.0 1.7370520142855156E-4 0.0011725101096427232 18 0.0 0.0 0.0 2.1713150178568946E-4 0.001215936409999861 19 0.0 0.0 0.0 3.4741040285710313E-4 0.0013027890107141368 20 0.0 0.0 0.0 4.342630035713789E-4 0.0014330679117855506 21 0.0 0.0 0.0 6.079682049999305E-4 0.0014330679117855506 22 0.0 0.0 0.0 6.513945053570684E-4 0.0014330679117855506 23 0.0 0.0 0.0 6.948208057142063E-4 0.0014764942121426885 24 0.0 0.0 0.0 9.988049082141715E-4 0.0015199205124998263 25 0.0 0.0 0.0 0.001259362710356999 0.0015199205124998263 26 0.0 0.0 0.0 0.0016936257139283778 0.00165019941357124 27 0.0 0.0 0.0 0.0019541835160712053 0.0016936257139283778 28 0.0 0.0 0.0 0.002518725420713998 0.0017370520142855157 29 0.0 0.0 0.0 0.0034306777282138937 0.0017370520142855157 30 0.0 0.0 0.0 0.005688845346785064 0.0017370520142855157 31 0.0 0.0 0.0 0.010769722488570197 0.0017804783146426536 32 0.0 0.0 0.0 0.01689283083892664 0.0018239046149997917 33 0.0 0.0 0.0 0.022538249885354567 0.0018239046149997917 34 0.0 0.0 0.0 0.030224705048567974 0.0018239046149997917 35 0.0 0.0 0.0 0.0383888495157099 0.0018239046149997917 36 0.0 0.0 0.0 0.047334667389280306 0.0018239046149997917 37 0.0 4.342630035713789E-5 0.0 0.06396694042606411 0.0018239046149997917 38 0.0 4.342630035713789E-5 0.0 0.08715658481677575 0.0019107572157140674 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 1095 0.0 31.753788 1 GTATCAA 2575 0.0 25.125961 1 ATACCGT 300 0.0 21.266102 6 TACCGTA 95 1.5985002E-5 18.525822 7 ATTATAC 240 0.0 17.416204 3 CGTCGTA 255 0.0 17.254442 10 TACCGTC 310 0.0 17.031803 7 TATCAAC 3785 0.0 16.97328 2 TCTAGCG 185 4.2382453E-10 16.648205 28 TCAACGC 3845 0.0 16.420889 4 ATCAACG 3885 0.0 16.308447 3 GTATAAA 360 0.0 15.893642 1 CAACGCA 3975 0.0 15.883854 5 AACGCAG 4100 0.0 15.560561 6 CGCAATA 205 1.8117134E-9 15.024642 36 ACCGTCG 295 0.0 14.914858 8 GTATATA 400 0.0 14.304277 1 TATACTG 480 0.0 14.207955 5 CTTACAC 390 0.0 14.102189 3 TACGCTA 190 1.7554885E-7 13.894366 9 >>END_MODULE