##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062210_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1045925 Sequences flagged as poor quality 0 Sequence length 50 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.300115209025503 32.0 32.0 32.0 32.0 32.0 2 31.464446303511245 32.0 32.0 32.0 32.0 32.0 3 31.583702464325835 32.0 32.0 32.0 32.0 32.0 4 31.657799555417455 32.0 32.0 32.0 32.0 32.0 5 31.631683916150777 32.0 32.0 32.0 32.0 32.0 6 35.279648158328754 36.0 36.0 36.0 36.0 36.0 7 35.27682960059278 36.0 36.0 36.0 36.0 36.0 8 35.232422974878695 36.0 36.0 36.0 36.0 36.0 9 35.30046705069675 36.0 36.0 36.0 36.0 36.0 10 35.19107488586658 36.0 36.0 36.0 36.0 36.0 11 35.31135406458398 36.0 36.0 36.0 36.0 36.0 12 35.23124220187872 36.0 36.0 36.0 36.0 36.0 13 35.26877548581399 36.0 36.0 36.0 36.0 36.0 14 35.23180055931353 36.0 36.0 36.0 36.0 36.0 15 35.204877022731075 36.0 36.0 36.0 36.0 36.0 16 35.2159542988264 36.0 36.0 36.0 36.0 36.0 17 35.2000936969668 36.0 36.0 36.0 36.0 36.0 18 35.19703420417334 36.0 36.0 36.0 36.0 36.0 19 35.18537849272175 36.0 36.0 36.0 36.0 36.0 20 35.18675717666181 36.0 36.0 36.0 36.0 36.0 21 35.18399694050721 36.0 36.0 36.0 36.0 36.0 22 35.164989841527834 36.0 36.0 36.0 36.0 36.0 23 35.135297463967305 36.0 36.0 36.0 36.0 36.0 24 35.112413413963715 36.0 36.0 36.0 36.0 36.0 25 35.099814996295144 36.0 36.0 36.0 36.0 36.0 26 35.05859884790974 36.0 36.0 36.0 36.0 36.0 27 35.05072639051557 36.0 36.0 36.0 36.0 36.0 28 35.03144871764228 36.0 36.0 36.0 36.0 36.0 29 35.00468293615699 36.0 36.0 36.0 36.0 36.0 30 34.988693261945166 36.0 36.0 36.0 36.0 36.0 31 34.996265506608985 36.0 36.0 36.0 36.0 36.0 32 34.97175323278438 36.0 36.0 36.0 36.0 36.0 33 34.95304921480986 36.0 36.0 36.0 36.0 36.0 34 34.94075674642063 36.0 36.0 36.0 36.0 36.0 35 34.927160169228195 36.0 36.0 36.0 36.0 36.0 36 34.90854697994598 36.0 36.0 36.0 32.0 36.0 37 34.88532925400961 36.0 36.0 36.0 32.0 36.0 38 34.87504840213209 36.0 36.0 36.0 32.0 36.0 39 34.86736429476301 36.0 36.0 36.0 32.0 36.0 40 34.84855415063222 36.0 36.0 36.0 32.0 36.0 41 34.83070105409087 36.0 36.0 36.0 32.0 36.0 42 34.786960824150874 36.0 36.0 36.0 32.0 36.0 43 34.793959413915914 36.0 36.0 36.0 32.0 36.0 44 34.74533451251285 36.0 36.0 36.0 32.0 36.0 45 34.735081387288766 36.0 36.0 36.0 32.0 36.0 46 34.7163515548438 36.0 36.0 36.0 32.0 36.0 47 34.69260893467505 36.0 36.0 36.0 32.0 36.0 48 34.66394817984081 36.0 36.0 36.0 32.0 36.0 49 34.65631283313813 36.0 36.0 36.0 32.0 36.0 50 34.23592226976122 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 3.0 20 11.0 21 37.0 22 88.0 23 213.0 24 538.0 25 1144.0 26 2478.0 27 4642.0 28 8253.0 29 12583.0 30 19307.0 31 28345.0 32 42829.0 33 71892.0 34 166716.0 35 686845.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.14342987647426 17.6751988309239 12.0552365504604 26.126134742141442 2 16.4204463422633 19.538875912031887 36.49389652149054 27.54678122421427 3 18.815743430198427 22.697007998684416 28.18135577987651 30.305892791240645 4 12.932476037956834 15.524153261467122 34.481917919544905 37.06145278103114 5 15.241532614671224 36.067308841456125 32.54736238258001 16.143796161292638 6 35.97313382890743 33.9780577001219 15.998279035303678 14.050529435666995 7 31.564500322680882 29.74955183211033 19.447379114181228 19.23856873102756 8 28.86507158735091 32.70588235294118 18.492530535172218 19.936515524535697 9 27.213136697181923 14.286205989913233 18.3855438965509 40.11511341635394 10 17.213184501756817 26.115830484977415 29.972129932834573 26.6988550804312 11 37.66570260773956 21.001410234959486 21.431651409039844 19.901235748261108 12 24.875134330983894 23.314791514488626 27.69130453073072 24.11876962379676 13 29.662356287496717 18.94084183856395 24.881516361115757 26.515285512823578 14 23.946076439515263 19.153667806009032 24.449649831488873 32.45060592298683 15 25.566651528551283 26.59817864569639 21.635203288954752 26.199966536797568 16 26.336149365723443 25.505394314648594 22.878797150057938 25.279659169570024 17 24.64383201472381 25.830628391137033 24.38855558476946 25.136984009369694 18 25.48705784269014 24.538230825787366 25.297273317443064 24.67743801407943 19 26.019456461983413 24.68714295958123 24.761144441523054 24.532256136912302 20 26.240459383721365 23.994213723189947 24.316799611443674 25.448527281645017 21 27.078327795970075 23.7743624064823 24.20881038315367 24.93849941439396 22 26.506967516791356 23.570906135717188 24.596601094724765 25.32552525276669 23 24.969859215526927 23.75093816478237 25.119009489208118 26.16019313048259 24 25.25164448523788 24.37289658864923 24.88278262199786 25.492676304115037 25 25.431866942531194 23.877069462025922 24.933169140396434 25.757894455046447 26 25.200350314269375 24.840283846343596 25.151971760692522 24.807394078694507 27 25.77608782324444 24.26086532513512 24.53497833006189 25.428068521558554 28 25.33471013141729 24.05725185365784 25.181254511643026 25.426783503281847 29 25.138491309992983 24.42762980512738 25.13485812409051 25.299020760789126 30 25.14473056451374 24.42946757318275 25.21509997523685 25.210701887066655 31 25.654281067654377 24.222239007035917 24.512223221874734 25.61125670343497 32 25.649910030843838 24.174454113818154 24.2997990274535 25.875836827884513 33 25.150656693956808 24.052868237658483 24.812390228325086 25.984084840059623 34 25.81679599508947 24.171157148375205 24.88957048175953 25.122476374775793 35 26.113681408669663 23.878143993391483 25.159117831809795 24.849056766129056 36 24.95673673562656 24.57649805626041 24.685875237350395 25.780889970762637 37 26.13545207260698 24.271229222539333 24.567527643524027 25.02579106132966 38 25.251141334225686 24.01252479862323 25.008867748643542 25.727466118507543 39 25.848251676042818 24.073443756477573 24.369547841318038 25.708756726161564 40 25.9928560638365 24.20916664913827 24.78932463415054 25.00865265287469 41 25.087053046426377 24.67803280193209 25.04297676482005 25.19193738682148 42 26.23206156794015 24.571528556635677 24.561202215573843 24.635207659850327 43 25.740879733431495 23.870119563814377 24.772035166390186 25.61696553636394 44 25.25784383560334 24.424769453620616 24.602322435066952 25.71506427570909 45 25.433477929555476 24.601276793883933 24.508342567795612 25.45690270876498 46 25.382899528731688 24.401162251494167 24.674419471823818 25.54151874795033 47 25.524013855783966 24.273914660532338 24.925782829803893 25.276288653879803 48 26.14564997690964 24.920570116771252 23.894268140752718 25.03951176556639 49 25.42401727143129 24.95417773779053 24.167765412964474 25.45403957781371 50 25.62637022220905 24.975451928326322 24.124133407654792 25.274044441809835 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 199.0 1 129.0 2 59.0 3 141.0 4 223.0 5 226.5 6 230.0 7 179.0 8 128.0 9 175.5 10 223.0 11 380.0 12 537.0 13 994.5 14 1452.0 15 1873.5 16 2295.0 17 2155.5 18 2016.0 19 1886.5 20 1757.0 21 2010.5 22 2264.0 23 2679.5 24 3095.0 25 3969.5 26 4844.0 27 6126.0 28 7408.0 29 8606.5 30 9805.0 31 11289.5 32 12774.0 33 14621.5 34 16469.0 35 19461.0 36 22453.0 37 27556.5 38 32660.0 39 36390.5 40 40121.0 41 44692.0 42 49263.0 43 52055.5 44 54848.0 45 60281.5 46 65715.0 47 70811.5 48 75908.0 49 79844.5 50 83781.0 51 82294.5 52 80808.0 53 81215.0 54 81622.0 55 82589.0 56 83556.0 57 81169.0 58 78782.0 59 72334.5 60 65887.0 61 58019.0 62 50151.0 63 43232.0 64 36313.0 65 30633.0 66 24953.0 67 21450.0 68 17947.0 69 15693.5 70 13440.0 71 10493.5 72 7547.0 73 6772.5 74 5998.0 75 4384.5 76 2771.0 77 2492.0 78 2213.0 79 1865.0 80 1517.0 81 1160.0 82 803.0 83 704.0 84 605.0 85 445.0 86 285.0 87 194.5 88 104.0 89 69.5 90 35.0 91 26.0 92 17.0 93 14.0 94 11.0 95 11.5 96 12.0 97 13.0 98 14.0 99 10.5 100 7.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.029925663886033894 2 0.0043980208905992305 3 2.8682744938690635E-4 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 9.560914979563545E-5 13 0.0 14 0.0 15 0.0 16 8.60482348160719E-4 17 0.0 18 1.912182995912709E-4 19 0.0 20 1.912182995912709E-4 21 0.0 22 0.0 23 0.0 24 4.780457489781772E-4 25 9.560914979563545E-5 26 6.692640485694481E-4 27 5.736548987738127E-4 28 0.0019121829959127088 29 0.0010517006477519899 30 0.0015297463967301672 31 5.736548987738127E-4 32 0.0010517006477519899 33 3.824365991825418E-4 34 8.60482348160719E-4 35 1.912182995912709E-4 36 2.8682744938690635E-4 37 0.0019121829959127088 38 0.0 39 8.60482348160719E-4 40 2.8682744938690635E-4 41 0.0010517006477519899 42 0.005354112388555585 43 0.0038243659918254175 44 0.0038243659918254175 45 0.0022946195950952508 46 0.0022946195950952508 47 7.648731983650836E-4 48 0.0032507110930516054 49 0.003441929392642876 50 0.001720964696321438 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1045925.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 58.48020103712975 #Duplication Level Percentage of deduplicated Percentage of total 1 79.48369566542077 46.482225016878445 2 12.475263292252814 14.591118106441394 3 3.5137816767702676 6.164599765743243 4 1.4927096871233598 3.4917585037218055 5 0.7902789519513213 2.3107835992762733 6 0.4979857902253755 1.7473385475608327 7 0.31168514805296954 1.2759187082897645 8 0.23484711058214214 1.098712499186617 9 0.17096571938602828 0.8998298676137202 >10 0.8896951859438984 9.337594852323521 >50 0.0745768899839888 3.0775418366105383 >100 0.058260889485674434 6.84068421816436 >500 0.0054310990290748935 2.1448418606299047 >1k 8.228937922840749E-4 0.5370526175595634 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 1232 0.11779047254822286 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 1122 0.10727346607070298 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 1093 0.10450080072662955 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 1080 0.10325788177928628 No Hit TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCGGCGGCGTTATT 1053 0.10067643473480412 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.912182995912709E-4 2 0.0 0.0 0.0 0.0 1.912182995912709E-4 3 0.0 0.0 0.0 0.0 1.912182995912709E-4 4 0.0 0.0 0.0 0.0 1.912182995912709E-4 5 0.0 0.0 0.0 0.0 1.912182995912709E-4 6 0.0 0.0 0.0 0.0 2.8682744938690635E-4 7 0.0 0.0 0.0 0.0 2.8682744938690635E-4 8 0.0 0.0 0.0 0.0 2.8682744938690635E-4 9 0.0 0.0 0.0 0.0 2.8682744938690635E-4 10 0.0 0.0 0.0 0.0 2.8682744938690635E-4 11 0.0 0.0 0.0 0.0 2.8682744938690635E-4 12 0.0 0.0 0.0 9.560914979563545E-5 0.0010517006477519899 13 0.0 0.0 0.0 9.560914979563545E-5 0.0012429189473432607 14 0.0 0.0 0.0 9.560914979563545E-5 0.0012429189473432607 15 0.0 9.560914979563545E-5 0.0 9.560914979563545E-5 0.0018165738461170735 16 0.0 9.560914979563545E-5 0.0 9.560914979563545E-5 0.0021034012955039798 17 0.0 9.560914979563545E-5 0.0 9.560914979563545E-5 0.0021034012955039798 18 0.0 9.560914979563545E-5 0.0 9.560914979563545E-5 0.0022946195950952508 19 0.0 9.560914979563545E-5 0.0 9.560914979563545E-5 0.0022946195950952508 20 0.0 9.560914979563545E-5 0.0 1.912182995912709E-4 0.0024858378946865213 21 0.0 9.560914979563545E-5 0.0 1.912182995912709E-4 0.0026770561942777923 22 0.0 9.560914979563545E-5 0.0 2.8682744938690635E-4 0.002772665344073428 23 0.0 9.560914979563545E-5 0.0 6.692640485694481E-4 0.002772665344073428 24 0.0 9.560914979563545E-5 0.0 7.648731983650836E-4 0.002772665344073428 25 0.0 9.560914979563545E-5 0.0 9.560914979563544E-4 0.002772665344073428 26 0.0 9.560914979563545E-5 0.0 0.0012429189473432607 0.002772665344073428 27 0.0 9.560914979563545E-5 0.0 0.0013385280971388962 0.002772665344073428 28 0.0 9.560914979563545E-5 0.0 0.0019121829959127088 0.002772665344073428 29 0.0 9.560914979563545E-5 0.0 0.0030594927934603344 0.002772665344073428 30 0.0 9.560914979563545E-5 0.0 0.00525850323875995 0.002772665344073428 31 0.0 9.560914979563545E-5 0.0 0.011664316275067524 0.002772665344073428 32 0.0 9.560914979563545E-5 0.0 0.016635992064440566 0.0028682744938690634 33 0.0 9.560914979563545E-5 0.0 0.02285058680115687 0.0028682744938690634 34 0.0 9.560914979563545E-5 0.0 0.028873963238281904 0.002963883643664699 35 0.0 9.560914979563545E-5 0.0 0.03537538542438511 0.002963883643664699 36 0.0 9.560914979563545E-5 0.0 0.04608361020149628 0.002963883643664699 37 0.0 1.912182995912709E-4 0.0 0.05985132777206779 0.002963883643664699 38 0.0 1.912182995912709E-4 0.0 0.07964242177976433 0.002963883643664699 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 1345 0.0 27.156872 1 GGTATCA 620 0.0 23.778095 1 CGGATCG 75 2.0625976E-6 23.468273 26 ATACGAA 220 0.0 21.001436 40 CGAATGC 235 0.0 19.660921 43 TACGAAT 255 0.0 18.118887 41 GTATTAA 135 5.512993E-8 17.928867 1 TCAACGC 2020 0.0 17.642242 4 CGCAATA 280 0.0 17.285246 36 TAATACC 140 8.3760824E-8 17.28442 4 CAACGCA 2075 0.0 17.280632 5 AACGCAG 2075 0.0 17.280632 6 ATCAACG 2065 0.0 17.257788 3 GTCCTAA 90 2.2122369E-4 17.113918 1 TCGATTT 90 2.2138536E-4 17.112284 30 TCTAGCG 270 0.0 17.112282 28 TATCAAC 2155 0.0 16.84409 2 GTTATAG 170 2.4610927E-9 16.82629 1 CAATACG 275 0.0 16.801151 38 CTAGCGG 250 0.0 16.721144 29 >>END_MODULE