##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062208_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 49290 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.291499289916818 32.0 32.0 32.0 32.0 32.0 2 31.54386285250558 32.0 32.0 32.0 32.0 32.0 3 31.614607425441267 32.0 32.0 32.0 32.0 32.0 4 31.6856766078312 32.0 32.0 32.0 32.0 32.0 5 31.629661188882125 32.0 32.0 32.0 32.0 32.0 6 35.29819435991073 36.0 36.0 36.0 36.0 36.0 7 35.302393994725094 36.0 36.0 36.0 36.0 36.0 8 35.24211807668898 36.0 36.0 36.0 36.0 36.0 9 35.33012781497261 36.0 36.0 36.0 36.0 36.0 10 35.215784134712926 36.0 36.0 36.0 36.0 36.0 11 35.31008318117265 36.0 36.0 36.0 36.0 36.0 12 35.220247514708866 36.0 36.0 36.0 36.0 36.0 13 35.258348549401504 36.0 36.0 36.0 36.0 36.0 14 35.228626496246704 36.0 36.0 36.0 36.0 36.0 15 35.22444714952323 36.0 36.0 36.0 36.0 36.0 16 35.24434976668695 36.0 36.0 36.0 36.0 36.0 17 35.20588354635829 36.0 36.0 36.0 36.0 36.0 18 35.20180564008927 36.0 36.0 36.0 36.0 36.0 19 35.19646987218503 36.0 36.0 36.0 36.0 36.0 20 35.21022519780889 36.0 36.0 36.0 36.0 36.0 21 35.170866301481034 36.0 36.0 36.0 36.0 36.0 22 35.18689389328464 36.0 36.0 36.0 36.0 36.0 23 35.143964292960035 36.0 36.0 36.0 36.0 36.0 24 35.13304930006086 36.0 36.0 36.0 36.0 36.0 25 35.1132278352607 36.0 36.0 36.0 36.0 36.0 26 35.079772773382025 36.0 36.0 36.0 36.0 36.0 27 35.0618178129438 36.0 36.0 36.0 36.0 36.0 28 35.02937715560966 36.0 36.0 36.0 36.0 36.0 29 35.04656116859404 36.0 36.0 36.0 36.0 36.0 30 35.01442483262325 36.0 36.0 36.0 36.0 36.0 31 34.98924731182796 36.0 36.0 36.0 36.0 36.0 32 34.964698721850276 36.0 36.0 36.0 36.0 36.0 33 34.974457293568676 36.0 36.0 36.0 36.0 36.0 34 34.91625076080341 36.0 36.0 36.0 32.0 36.0 35 34.93696490160276 36.0 36.0 36.0 36.0 36.0 36 34.92432542097789 36.0 36.0 36.0 32.0 36.0 37 34.92286467843376 36.0 36.0 36.0 32.0 36.0 38 34.8943599107324 36.0 36.0 36.0 32.0 36.0 39 34.86895922093731 36.0 36.0 36.0 32.0 36.0 40 34.846175694867114 36.0 36.0 36.0 32.0 36.0 41 34.78383039156015 36.0 36.0 36.0 32.0 36.0 42 34.768553459119495 36.0 36.0 36.0 32.0 36.0 43 34.74629742341246 36.0 36.0 36.0 32.0 36.0 44 34.73323189287888 36.0 36.0 36.0 32.0 36.0 45 34.6362345303307 36.0 36.0 36.0 32.0 36.0 46 34.640210996145264 36.0 36.0 36.0 32.0 36.0 47 34.644025157232704 36.0 36.0 36.0 32.0 36.0 48 34.550050720227226 36.0 36.0 36.0 32.0 36.0 49 34.55220125786163 36.0 36.0 36.0 32.0 36.0 50 34.17561371474944 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 20 2.0 21 1.0 22 7.0 23 9.0 24 24.0 25 65.0 26 126.0 27 245.0 28 408.0 29 562.0 30 897.0 31 1414.0 32 1984.0 33 3370.0 34 7649.0 35 32527.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.6245509346648 19.42803791430717 13.01832795469768 25.92908319633035 2 16.67681071211199 19.82349360925137 37.679042402109964 25.820653276526677 3 18.107121119902615 24.39845810509231 27.666869547575573 29.8275512274295 4 13.067559342665854 16.4921890850071 33.6802596875634 36.75999188476364 5 14.826536822884966 36.16960843984581 32.6739703793873 16.329884357881923 6 33.274497869750455 35.02130249543518 16.65449381213228 15.049705822682085 7 30.282004463379998 29.894501927368633 20.251572327044027 19.571921282207345 8 27.770338811117874 32.46297423412457 19.269628727936702 20.497058226820855 9 26.796510448366806 14.86305538648813 19.034286873605193 39.306147291539865 10 17.869750456482045 24.71698113207547 29.22093730979915 28.192331101643337 11 37.47819030229255 21.827956989247312 21.113816189896532 19.580036518563602 12 23.578819233110167 24.32542097788598 26.701156421180766 25.394603367823088 13 29.245283018867923 19.26557110975857 25.266788395212007 26.222357476161495 14 23.77155609657131 18.94299046459728 24.65611685940353 32.62933657942788 15 26.198011767092716 25.89369040373301 22.071414079935078 25.8368837492392 16 25.71214088621977 26.038792403830545 23.214575555916248 25.034491154033432 17 24.323392168796918 25.18969364982755 24.777845404747413 25.70906877662812 18 24.958409413674172 25.69689592209373 25.029417731791437 24.315276932440657 19 26.001217285453436 24.382227632379795 25.5893690403733 24.027186041793467 20 26.764049502941774 23.268411442483263 24.719009941164536 25.248529113410427 21 27.425441265976875 24.075877459931018 24.35585311422195 24.142828159870156 22 27.20835869344695 23.033069588151754 24.968553459119498 24.7900182592818 23 25.23229864069791 23.96835057821059 25.897748021911138 24.90160275918036 24 25.522418340434168 23.751268005680664 25.177520795293162 25.548792858592005 25 24.309190505173465 23.956177723676202 25.49401501318726 26.240616757963075 26 24.816392777439646 24.520186650436194 25.325623858794888 25.337796713329276 27 25.267301020511674 23.788269187851245 24.267077846984115 26.677351944652965 28 24.707338351356288 24.36446265901114 25.934792752946905 24.99340623668567 29 25.468157195317414 24.565318833816878 25.198320111992533 24.76820385887318 30 25.111079551218324 24.244760494227922 24.782405810627118 25.861754143926635 31 24.87522824102252 24.814363968350577 25.345911949685533 24.964495840941368 32 25.529022702834304 23.67059587331859 24.68907869910122 26.11130272474589 33 25.1004260499087 23.552444714952323 25.104483668086836 26.242645567052143 34 24.938121322783527 23.64982755122743 25.713126394806245 25.6989247311828 35 25.74761614932035 23.542300669507 25.899776831000203 24.810306350172446 36 24.473524041387705 24.641915195780076 25.50821667681071 25.376344086021508 37 26.27563959504149 24.052019720424436 24.893992574408085 24.778348110125993 38 25.575167376749846 23.371880706025564 24.86305538648813 26.189896530736455 39 25.83485494015013 23.724893487522824 24.723067559342667 25.71718401298438 40 25.889632785554877 24.043416514505985 25.305335767904243 24.761614932034895 41 25.569080949482654 24.313248123351592 24.84885372286468 25.268817204301076 42 24.956886932175536 24.23055854247398 25.756253930897362 25.056300594453123 43 26.617566498265262 23.350985046766894 24.34921987542354 25.682228579544304 44 25.0684736959565 23.139037107671083 25.756253930897362 26.036235265475057 45 26.06922577503652 24.174241194611266 24.963479954552835 24.793053075799385 46 24.14485696895922 24.568878068573746 24.92189085007101 26.36437411239602 47 25.1232526527217 23.79232688835237 25.449897543062345 25.634522915863577 48 25.522936152082615 25.44786869281178 23.7030574773276 25.326137677778004 49 26.230040375758314 24.31269908900927 24.641386166737682 24.815874368494732 50 24.28281598701562 25.06390748630554 24.856968959220936 25.796307567457905 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 11.0 1 6.0 2 1.0 3 11.0 4 21.0 5 23.0 6 25.0 7 16.0 8 7.0 9 12.0 10 17.0 11 28.5 12 40.0 13 84.0 14 128.0 15 153.0 16 178.0 17 178.0 18 178.0 19 151.0 20 124.0 21 126.5 22 129.0 23 150.0 24 171.0 25 185.5 26 200.0 27 224.0 28 248.0 29 302.0 30 356.0 31 370.0 32 384.0 33 496.5 34 609.0 35 838.0 36 1067.0 37 1284.0 38 1501.0 39 1783.5 40 2066.0 41 2297.0 42 2528.0 43 2784.5 44 3041.0 45 3423.0 46 3805.0 47 3826.5 48 3848.0 49 3774.0 50 3700.0 51 3714.0 52 3728.0 53 3760.5 54 3793.0 55 3758.0 56 3723.0 57 3640.0 58 3557.0 59 3127.5 60 2698.0 61 2296.0 62 1894.0 63 1602.0 64 1310.0 65 1098.5 66 887.0 67 977.5 68 1068.0 69 962.5 70 857.0 71 715.5 72 574.0 73 443.5 74 313.0 75 228.0 76 143.0 77 146.5 78 150.0 79 123.5 80 97.0 81 84.5 82 72.0 83 48.0 84 24.0 85 19.0 86 14.0 87 8.5 88 3.0 89 1.5 90 0.0 91 0.5 92 1.0 93 1.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0426049908703591 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.004057618178129438 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.002028809089064719 28 0.002028809089064719 29 0.002028809089064719 30 0.002028809089064719 31 0.0 32 0.002028809089064719 33 0.0 34 0.0 35 0.0 36 0.0 37 0.002028809089064719 38 0.0 39 0.0 40 0.0 41 0.0 42 0.002028809089064719 43 0.006086427267194157 44 0.002028809089064719 45 0.004057618178129438 46 0.0 47 0.002028809089064719 48 0.002028809089064719 49 0.006086427267194157 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 49290.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 41.23148711706228 #Duplication Level Percentage of deduplicated Percentage of total 1 59.7008315701422 24.615540677622235 2 15.342223096983712 12.651653479407587 3 8.10411848644393 10.024345709068777 4 4.684347783299709 7.72570501115845 5 3.173744033853269 6.542909312233719 6 1.9731338877134283 4.881314668289714 7 1.5794912168479063 4.558734023128424 8 1.1661664124391085 3.8466220328667076 9 0.8217290754317769 3.0493000608642724 >10 3.409929636372583 20.95556908094948 >50 0.044284800472371204 1.148305944410631 >100 0.0 0.0 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 74 0.15013187259078922 No Hit CATCTACACCGCGCAATGCGGTTCGACAGCAATCTACACTCTCCTTCGCT 71 0.14404544532359506 No Hit TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCGGCGGCGTTATT 70 0.14201663623453034 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCG 67 0.13593020896733618 No Hit ATATTATACTATGAACTCGAAGGCCGATTCGGCCTGCTCGAGCCGCTCGT 66 0.13390139987827146 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 57 0.11564211807668899 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 56 0.11361330898762426 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 54 0.10955569080949483 No Hit CTCCTGGAGCGTTCCAGGTTTGTCTCCTAGGTGCCTGCTTCTGAGCTGGT 51 0.10346926354230068 No Hit CTCCAGGAGCACCTCGACGCTTACAAGAAACAGCGCGTGCACACACCAGA 50 0.10144045445323595 No Hit ATCCAGAACTGTGTTTCTAAAATGCTTGGCTGGTTTGCCTTAATTCTAGC 50 0.10144045445323595 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 14 0.0 0.0 0.0 0.0 0.0 15 0.0 0.0 0.0 0.0 0.0 16 0.0 0.0 0.0 0.0 0.0 17 0.0 0.0 0.0 0.0 0.0 18 0.0 0.0 0.0 0.0 0.0 19 0.0 0.0 0.0 0.0 0.0 20 0.0 0.0 0.0 0.0 0.0 21 0.0 0.0 0.0 0.0 0.0 22 0.0 0.0 0.0 0.0 0.0 23 0.0 0.0 0.0 0.0 0.0 24 0.0 0.0 0.0 0.0 0.0 25 0.0 0.0 0.0 0.0 0.0 26 0.0 0.0 0.0 0.0 0.0 27 0.0 0.0 0.0 0.0 0.0 28 0.0 0.0 0.0 0.0 0.0 29 0.0 0.0 0.0 0.002028809089064719 0.0 30 0.0 0.0 0.0 0.006086427267194157 0.0 31 0.0 0.0 0.0 0.010144045445323595 0.0 32 0.0 0.0 0.0 0.016230472712517752 0.0 33 0.0 0.0 0.0 0.036518563603164945 0.0 34 0.0 0.0 0.0 0.0426049908703591 0.0 35 0.0 0.0 0.0 0.052749036315682694 0.0 36 0.0 0.0 0.0 0.07303712720632989 0.0 37 0.0 0.0 0.0 0.11969973625481842 0.0 38 0.0 0.0 0.0 0.1602759180361128 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTAATTC 25 0.0023209823 35.230896 40 GGTATCA 45 1.0117474E-6 34.217484 1 CTCCAAT 30 0.005696203 29.329271 1 TTTGCCT 30 0.005696203 29.329271 34 TGAGGCT 30 0.005696203 29.329271 33 GTATCAA 125 0.0 28.156101 1 AAGACGG 50 0.0025478294 21.996954 5 TCAACGC 160 0.0 21.996954 4 TATCAAC 165 0.0 21.33038 2 CAACGCA 165 0.0 21.33038 5 ATCAACG 170 0.0 20.703016 3 AACGCAG 170 0.0 20.703016 6 AGACGGA 55 0.004427423 19.997232 6 GAGTACT 110 2.6912421E-6 17.997509 12 AGTACTT 110 2.6912421E-6 17.997509 13 GTACTTT 115 4.1129388E-6 17.215008 14 ACTTTTT 115 4.1129388E-6 17.215008 16 ACGCAGA 205 5.456968E-12 17.168356 7 GCAGAGT 205 5.456968E-12 17.168356 9 CAGAGTA 205 5.456968E-12 17.168356 10 >>END_MODULE