##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062207_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 698133 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.25898217101899 32.0 32.0 32.0 32.0 32.0 2 31.42589306049134 32.0 32.0 32.0 32.0 32.0 3 31.569895707551428 32.0 32.0 32.0 32.0 32.0 4 31.64946937044947 32.0 32.0 32.0 32.0 32.0 5 31.624597318848988 32.0 32.0 32.0 32.0 32.0 6 35.25237168275959 36.0 36.0 36.0 36.0 36.0 7 35.2577689351456 36.0 36.0 36.0 36.0 36.0 8 35.214397543161546 36.0 36.0 36.0 36.0 36.0 9 35.30172904016857 36.0 36.0 36.0 36.0 36.0 10 35.175783124418984 36.0 36.0 36.0 36.0 36.0 11 35.29827554348527 36.0 36.0 36.0 36.0 36.0 12 35.222586527208996 36.0 36.0 36.0 36.0 36.0 13 35.25545562235276 36.0 36.0 36.0 36.0 36.0 14 35.21474561437434 36.0 36.0 36.0 36.0 36.0 15 35.20317618562652 36.0 36.0 36.0 36.0 36.0 16 35.20856341126977 36.0 36.0 36.0 36.0 36.0 17 35.193408705791015 36.0 36.0 36.0 36.0 36.0 18 35.190992260786985 36.0 36.0 36.0 36.0 36.0 19 35.173445460965176 36.0 36.0 36.0 36.0 36.0 20 35.172427030379595 36.0 36.0 36.0 36.0 36.0 21 35.15745996822955 36.0 36.0 36.0 36.0 36.0 22 35.14346979730223 36.0 36.0 36.0 36.0 36.0 23 35.11461426404424 36.0 36.0 36.0 36.0 36.0 24 35.103447337398464 36.0 36.0 36.0 36.0 36.0 25 35.09138516586381 36.0 36.0 36.0 36.0 36.0 26 35.03808729855199 36.0 36.0 36.0 36.0 36.0 27 35.03320857200562 36.0 36.0 36.0 36.0 36.0 28 35.00586850929551 36.0 36.0 36.0 36.0 36.0 29 34.98829449402908 36.0 36.0 36.0 36.0 36.0 30 34.96274062392123 36.0 36.0 36.0 36.0 36.0 31 34.96626574019564 36.0 36.0 36.0 36.0 36.0 32 34.94460081388503 36.0 36.0 36.0 36.0 36.0 33 34.917187699191985 36.0 36.0 36.0 32.0 36.0 34 34.915450207911675 36.0 36.0 36.0 36.0 36.0 35 34.891686827581566 36.0 36.0 36.0 32.0 36.0 36 34.867813153081144 36.0 36.0 36.0 32.0 36.0 37 34.84801176853121 36.0 36.0 36.0 32.0 36.0 38 34.834124729815095 36.0 36.0 36.0 32.0 36.0 39 34.8127505790444 36.0 36.0 36.0 32.0 36.0 40 34.79899961755138 36.0 36.0 36.0 32.0 36.0 41 34.779024913590966 36.0 36.0 36.0 32.0 36.0 42 34.73754571120403 36.0 36.0 36.0 32.0 36.0 43 34.734072161035215 36.0 36.0 36.0 32.0 36.0 44 34.680016558449466 36.0 36.0 36.0 32.0 36.0 45 34.672907597835945 36.0 36.0 36.0 32.0 36.0 46 34.63386632633037 36.0 36.0 36.0 32.0 36.0 47 34.60614381500373 36.0 36.0 36.0 32.0 36.0 48 34.58497736104725 36.0 36.0 36.0 32.0 36.0 49 34.55327996241404 36.0 36.0 36.0 32.0 36.0 50 34.134492997752574 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 2.0 20 8.0 21 26.0 22 45.0 23 153.0 24 359.0 25 770.0 26 1741.0 27 3426.0 28 5664.0 29 8807.0 30 13226.0 31 19563.0 32 29416.0 33 50353.0 34 114611.0 35 449963.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.76444526596484 18.21024139803666 11.953981484267645 26.07133185173085 2 15.852268006680973 19.850967337151303 38.09701161148371 26.199753044684016 3 18.839390202153456 23.282239917035866 28.603002579737673 29.275367301073 4 12.440770513312668 16.044673500140373 35.533967788326564 35.980588198220396 5 14.284240968411464 36.987364871736474 33.518111878395665 15.2102822814564 6 34.975713796654794 35.31791220297565 16.261228161396183 13.445145838973376 7 30.485881630004595 30.239796714952593 20.10677048642594 19.167551168616868 8 27.730962438389245 34.458620348844704 18.779229745621535 19.031187467144512 9 26.73244209914157 14.432636761190205 18.694288910565753 40.14063222910248 10 16.299616262230835 27.233922476089802 31.329273934909253 25.137187326770118 11 37.402328782624515 21.174905068231983 21.76762880425363 19.65513734488987 12 23.77555566059762 23.886995744363894 29.293415438032582 23.0440331570059 13 29.863220904899208 19.553867243061134 24.97690268186721 25.606009170172445 14 23.069672970623074 19.783766130522405 25.357775667387163 31.788785231467358 15 25.114555535979534 27.644589211511274 22.048377601402596 25.192477651106593 16 25.607944640762266 25.912758493749738 24.203193956435108 24.276102909052884 17 23.81766798016997 26.486500423271785 25.36149988612485 24.3343317104334 18 24.48691651435545 25.390184091260675 26.45660133040743 23.66629806397644 19 25.48053164654872 25.126587627285918 25.399744747777287 23.99313597838807 20 25.488949049603942 24.840502485210493 25.211923280764324 24.45862518442124 21 26.249726055064006 24.609350940293613 24.797853704093633 24.343069300548752 22 25.455178311295985 24.826501540537404 25.33027374440114 24.388046403765472 23 24.445771794199672 24.73797972592615 25.688514939130506 25.12773354074367 24 24.619340237491585 25.193015627461936 25.608124561328122 24.57951957371836 25 24.64755847764743 24.85582914356925 25.753512956039703 24.743099422743615 26 24.15291200598172 25.820373656942074 26.010596925774248 24.016117411301956 27 24.718891896924642 25.200607336742443 25.59594917851976 24.484551587813158 28 24.36332487727737 25.277209186399453 25.800758896405913 24.558707039917262 29 24.25203865750124 25.173355716906997 25.71007447026418 24.864531155327583 30 24.350185211180854 25.473484577194245 25.769134907652248 24.40719530397266 31 24.81923189310904 25.19623796072949 25.2490932946778 24.735436851483676 32 24.68075292890835 25.295684023107544 25.184099741164573 24.839463306819535 33 24.45654976422797 24.901308062085683 25.731237072645285 24.910905101041063 34 24.938764986463838 25.163364989328635 25.702089868649104 24.19578015555842 35 25.142809669231607 25.02821815931658 25.867600969444176 23.96137120200764 36 24.207708273351926 25.588390750759526 25.593404122137187 24.610496853751364 37 25.015398366483986 25.313195612253374 25.40658849548649 24.26481752577615 38 24.513667166571413 25.163113618751726 25.644970227735975 24.678248986940883 39 25.218011596727248 24.98137877294708 25.312836614489033 24.487773015836638 40 25.464775336504648 25.135754934947922 25.350040751547343 24.049428977000083 41 24.366735039992665 25.41425068182339 26.104668484862376 24.11434579332157 42 25.303358683055887 25.555327953978008 25.439442143758566 23.701871219207536 43 24.73328214795249 24.953159646820872 25.75761048307158 24.555947722155057 44 24.297417429806202 25.544081604003992 25.380925164338215 24.77757580185159 45 24.308215469502464 25.774148358023385 25.416904208719966 24.500731963754184 46 24.33328654139797 25.338549201720035 25.28483396979915 25.04333028708285 47 24.663960397174172 25.291062435184173 25.603324299702635 24.441652867939016 48 25.162045359808737 25.528321589670348 24.732884787002565 24.576748263518343 49 24.615322911026503 25.660991408329252 25.04848750497767 24.675198175666576 50 24.7528383128547 25.93887063366785 24.750689703577862 24.55760134989959 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 131.0 1 84.0 2 37.0 3 91.0 4 145.0 5 150.5 6 156.0 7 110.5 8 65.0 9 112.0 10 159.0 11 273.5 12 388.0 13 705.0 14 1022.0 15 1231.5 16 1441.0 17 1557.0 18 1673.0 19 1631.0 20 1589.0 21 1890.0 22 2191.0 23 2617.0 24 3043.0 25 3943.5 26 4844.0 27 6288.0 28 7732.0 29 9102.0 30 10472.0 31 11954.0 32 13436.0 33 15318.5 34 17201.0 35 19645.5 36 22090.0 37 25276.0 38 28462.0 39 30257.5 40 32053.0 41 34267.5 42 36482.0 43 37513.5 44 38545.0 45 41891.5 46 45238.0 47 47623.0 48 50008.0 49 51839.0 50 53670.0 51 51998.0 52 50326.0 53 49987.0 54 49648.0 55 49196.5 56 48745.0 57 46931.0 58 45117.0 59 41112.0 60 37107.0 61 32725.5 62 28344.0 63 24627.0 64 20910.0 65 17433.5 66 13957.0 67 12127.0 68 10297.0 69 9248.0 70 8199.0 71 6442.5 72 4686.0 73 4086.0 74 3486.0 75 2592.0 76 1698.0 77 1531.5 78 1365.0 79 1087.5 80 810.0 81 658.0 82 506.0 83 423.0 84 340.0 85 268.5 86 197.0 87 130.0 88 63.0 89 43.0 90 23.0 91 16.5 92 10.0 93 8.5 94 7.0 95 7.5 96 8.0 97 6.5 98 5.0 99 5.5 100 6.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.03437740373252661 2 0.004440414648784688 3 0.0 4 1.4323918221886088E-4 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 2.8647836443772176E-4 17 0.0 18 1.4323918221886088E-4 19 0.0 20 4.297175466565826E-4 21 0.0 22 0.0 23 0.0 24 4.297175466565826E-4 25 4.297175466565826E-4 26 8.594350933131652E-4 27 4.297175466565826E-4 28 0.002005348551064052 29 2.8647836443772176E-4 30 0.0015756310044074697 31 1.4323918221886088E-4 32 8.594350933131652E-4 33 1.4323918221886088E-4 34 4.297175466565826E-4 35 1.4323918221886088E-4 36 0.0 37 0.001002674275532026 38 0.0 39 7.161959110943044E-4 40 0.0 41 7.161959110943044E-4 42 0.004583653831003548 43 0.0024350660977206346 44 0.004297175466565826 45 0.0015756310044074697 46 0.001002674275532026 47 1.4323918221886088E-4 48 0.003724218737690383 49 0.002148587733282913 50 0.001002674275532026 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 698133.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 63.88612510404382 #Duplication Level Percentage of deduplicated Percentage of total 1 78.81733083280281 50.35333857951251 2 14.0627510085803 17.968293404823587 3 3.67045921202018 7.03474249225234 4 1.3640728482145343 3.485813145282525 5 0.6197634684769548 1.9797143241017428 6 0.3520022594114932 1.3492836229001244 7 0.20276961844552277 0.906791564791693 8 0.1475904262308403 0.7543184347474091 9 0.09932971672739573 0.5711211638456073 >10 0.5620861803772392 6.825283455864274 >50 0.05497817092573615 2.4880006540091393 >100 0.04461307231683358 5.43703304685295 >500 0.0022531854701301887 0.8462661110159966 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 703 0.10069714509985919 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 1.4323918221886088E-4 13 0.0 0.0 0.0 0.0 5.729567288754435E-4 14 0.0 0.0 0.0 0.0 5.729567288754435E-4 15 0.0 0.0 0.0 2.8647836443772176E-4 8.594350933131652E-4 16 0.0 0.0 0.0 2.8647836443772176E-4 8.594350933131652E-4 17 0.0 0.0 0.0 2.8647836443772176E-4 8.594350933131652E-4 18 0.0 0.0 0.0 2.8647836443772176E-4 8.594350933131652E-4 19 0.0 0.0 0.0 2.8647836443772176E-4 8.594350933131652E-4 20 0.0 0.0 0.0 2.8647836443772176E-4 0.001002674275532026 21 0.0 0.0 0.0 2.8647836443772176E-4 0.001002674275532026 22 0.0 0.0 0.0 4.297175466565826E-4 0.001002674275532026 23 0.0 0.0 0.0 5.729567288754435E-4 0.001002674275532026 24 0.0 0.0 0.0 0.001002674275532026 0.001002674275532026 25 0.0 0.0 0.0 0.0015756310044074697 0.001002674275532026 26 0.0 0.0 0.0 0.002291826915501774 0.001145913457750887 27 0.0 0.0 0.0 0.002578305279939496 0.001145913457750887 28 0.0 0.0 0.0 0.004010697102128104 0.001145913457750887 29 0.0 0.0 0.0 0.005156610559878992 0.001145913457750887 30 0.0 0.0 0.0 0.007018719928724183 0.001145913457750887 31 0.0 0.0 0.0 0.012748287217478617 0.001145913457750887 32 0.0 0.0 0.0 0.018764332870670773 0.001145913457750887 33 0.0 0.0 0.0 0.0230615083372366 0.001145913457750887 34 0.0 0.0 0.0 0.028218118897115594 0.001289152639969748 35 0.0 0.0 0.0 0.033804447003651164 0.001289152639969748 36 0.0 0.0 0.0 0.0421123195723451 0.001289152639969748 37 0.0 0.0 0.0 0.052568779874321944 0.001289152639969748 38 0.0 0.0 0.0 0.0670359372784269 0.001289152639969748 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTTACG 25 0.0023523963 35.19914 9 TACACCG 70 3.587047E-8 28.285023 5 CTAGCGG 130 0.0 27.076263 29 GTTATAG 155 0.0 25.56241 1 CGCAATA 150 0.0 23.466091 36 GGTATCA 480 0.0 22.929245 1 GTATCAA 860 0.0 22.77994 1 TCTAGCG 155 0.0 22.709124 28 GACGGAC 310 0.0 21.999462 7 ACGGACC 315 0.0 21.650267 8 AAGACGG 305 0.0 21.638817 5 AGCGAAA 305 0.0 21.638817 17 GAGCGAA 310 0.0 21.291328 16 CGGACCA 310 0.0 21.289803 9 CGCAAGA 300 0.0 21.266146 2 AGACGGA 345 0.0 21.042965 6 GCGCAAG 315 0.0 20.963882 1 GTATTAC 95 6.821683E-7 20.853546 1 AGCGGCG 180 0.0 20.777271 31 TAGCGGC 170 0.0 20.705378 30 >>END_MODULE