##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062206_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1259571 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.28458498965124 32.0 32.0 32.0 32.0 32.0 2 31.45448410609644 32.0 32.0 32.0 32.0 32.0 3 31.569036600556856 32.0 32.0 32.0 32.0 32.0 4 31.64749902943145 32.0 32.0 32.0 32.0 32.0 5 31.618826568728558 32.0 32.0 32.0 32.0 32.0 6 35.25686047074758 36.0 36.0 36.0 36.0 36.0 7 35.264632958364395 36.0 36.0 36.0 36.0 36.0 8 35.21703659420549 36.0 36.0 36.0 36.0 36.0 9 35.292627410443714 36.0 36.0 36.0 36.0 36.0 10 35.178711640709416 36.0 36.0 36.0 36.0 36.0 11 35.29802448611472 36.0 36.0 36.0 36.0 36.0 12 35.21359970974245 36.0 36.0 36.0 36.0 36.0 13 35.24492545477786 36.0 36.0 36.0 36.0 36.0 14 35.21198804989953 36.0 36.0 36.0 36.0 36.0 15 35.190623632967096 36.0 36.0 36.0 36.0 36.0 16 35.20491103717059 36.0 36.0 36.0 36.0 36.0 17 35.18650238851164 36.0 36.0 36.0 36.0 36.0 18 35.1781233451707 36.0 36.0 36.0 36.0 36.0 19 35.17904905717899 36.0 36.0 36.0 36.0 36.0 20 35.16837399400272 36.0 36.0 36.0 36.0 36.0 21 35.16458222680579 36.0 36.0 36.0 36.0 36.0 22 35.14788765381229 36.0 36.0 36.0 36.0 36.0 23 35.119840009018944 36.0 36.0 36.0 36.0 36.0 24 35.10330342632531 36.0 36.0 36.0 36.0 36.0 25 35.08286472140117 36.0 36.0 36.0 36.0 36.0 26 35.04666747646619 36.0 36.0 36.0 36.0 36.0 27 35.035358864248224 36.0 36.0 36.0 36.0 36.0 28 35.012407399027126 36.0 36.0 36.0 36.0 36.0 29 34.995736643666774 36.0 36.0 36.0 36.0 36.0 30 34.97626017112176 36.0 36.0 36.0 36.0 36.0 31 34.972513657427804 36.0 36.0 36.0 36.0 36.0 32 34.94692399237518 36.0 36.0 36.0 36.0 36.0 33 34.934748418310676 36.0 36.0 36.0 36.0 36.0 34 34.91717497465407 36.0 36.0 36.0 32.0 36.0 35 34.90773684055921 36.0 36.0 36.0 32.0 36.0 36 34.886771765942534 36.0 36.0 36.0 32.0 36.0 37 34.87908899141057 36.0 36.0 36.0 32.0 36.0 38 34.86142345290579 36.0 36.0 36.0 32.0 36.0 39 34.8499973403643 36.0 36.0 36.0 32.0 36.0 40 34.83733112305698 36.0 36.0 36.0 32.0 36.0 41 34.80506140582786 36.0 36.0 36.0 32.0 36.0 42 34.778419001390155 36.0 36.0 36.0 32.0 36.0 43 34.77159286773036 36.0 36.0 36.0 32.0 36.0 44 34.72911888254016 36.0 36.0 36.0 32.0 36.0 45 34.716571753398576 36.0 36.0 36.0 32.0 36.0 46 34.69773835694852 36.0 36.0 36.0 32.0 36.0 47 34.680180791714 36.0 36.0 36.0 32.0 36.0 48 34.65372972226258 36.0 36.0 36.0 32.0 36.0 49 34.64579130513484 36.0 36.0 36.0 32.0 36.0 50 34.22792125255345 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 2.0 20 11.0 21 27.0 22 99.0 23 245.0 24 658.0 25 1505.0 26 3162.0 27 5787.0 28 9859.0 29 15925.0 30 23607.0 31 34800.0 32 52159.0 33 88626.0 34 201615.0 35 821483.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.00841821033613 17.754561518454544 11.979748644946095 26.25727162626323 2 16.450194796894365 19.448407603867196 36.84078896910483 27.260608630133614 3 18.842933870026556 22.605105730946796 28.303263428247057 30.248696970779594 4 12.897724701505512 15.520760639932169 34.70165635760112 36.879858300961196 5 15.029641044450848 36.17525332037654 32.84697726448132 15.948128370691292 6 35.74617308964112 34.189606428240815 16.012963184967532 14.05125729715053 7 31.479606945539395 29.834284847777536 19.525775045630617 19.160333161052453 8 28.657058633455357 33.034263253123484 18.60697015094822 19.701707962472938 9 27.068343110471737 14.39942647139383 18.436356505508623 40.095873912625805 10 16.875110652753992 26.405815948445937 30.477281550623186 26.24179184817688 11 37.66218815771401 21.101152694052182 21.45960807290736 19.77705107532644 12 24.67165407904755 23.35279233961404 28.01644369392436 23.959109887414048 13 29.62326061809934 19.1504091472414 25.002639787673743 26.223690446985522 14 23.76436104038597 19.10547321270496 24.715319739816174 32.41484600709289 15 25.429848734211884 26.742835457469248 21.740973712478294 26.08634209584057 16 26.112230988049028 25.686845358271082 23.111507721328746 25.089415932351137 17 24.447927111691204 25.906598357694804 24.65903073347989 24.986443797134104 18 25.106048179972674 25.030625555249454 25.48554307068529 24.377783194092583 19 25.80100685074521 24.901732415242968 25.06861463148961 24.22864610252221 20 25.96932120323889 24.2187989999738 24.71587458229693 25.096005214490376 21 26.548483570993614 24.147269189271586 24.509773565761677 24.794473673973123 22 26.06339777590942 24.040963153327603 24.890061775001172 25.00557729576181 23 24.767658804195083 24.099573664028203 25.394221837611248 25.73854569416547 24 24.924238995897753 24.634771224394687 25.13685410617894 25.304135673528627 25 25.2237475259355 24.187359624378853 25.16253601436049 25.426356835325155 26 24.86536997355432 25.03034782698444 25.315049743442763 24.789232456018475 27 25.449419603054697 24.635490393936337 24.802769836348784 25.112320166660183 28 25.138441971080216 24.42199732762337 25.25483246834393 25.184728232952487 29 24.92324718969992 24.75422031291805 25.294725234069276 25.027807263312752 30 24.869735740003414 24.794629849430947 25.364593050720295 24.97104135984534 31 25.356413295722408 24.552960034551667 24.644499719347106 25.446126950378822 32 25.308500342579677 24.54736213649041 24.68161526119021 25.4625222597397 33 24.903756761241343 24.357141212589386 25.07643487573924 25.66266715043003 34 25.482767408644758 24.474717778654625 25.212911482651496 24.82960333004912 35 25.769687885300446 24.31339609024992 25.26935801055758 24.647558013892056 36 24.79883960122804 24.798918993590654 24.978345733097168 25.423895672084136 37 25.652594698578618 24.550136596511926 24.91098004126874 24.886288663640716 38 24.98564987602922 24.365915061556674 25.31028421581634 25.338150846597767 39 25.56108923837629 24.40322366796633 24.73119560100003 25.30449149265735 40 25.735211222877645 24.463507387441748 25.00789952126519 24.793381868415413 41 24.812235422640995 24.913302782885395 25.33098965032122 24.943472144152384 42 25.871230977736598 24.759688482276058 24.897837335283295 24.47124320470405 43 25.475344340806096 24.077814511698218 25.0600234377233 25.386817709772387 44 24.960222563096064 24.685194536279244 24.91798384766115 25.436599052963537 45 25.153567115796392 24.928883161962197 24.83043506911612 25.08711465312529 46 25.072565944500546 24.622323634585214 24.93450010479983 25.370610316114405 47 25.178217420886867 24.621434361446127 25.236888842664523 24.96345937500248 48 25.766664152471385 25.115778692591988 24.32261624514198 24.794940909794644 49 25.12822385741825 25.07860162157527 24.473448531023028 25.319725989983453 50 25.199694176734404 25.165078666921787 24.579314374725598 25.05591278161821 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 226.0 1 141.5 2 57.0 3 151.5 4 246.0 5 257.0 6 268.0 7 206.5 8 145.0 9 195.0 10 245.0 11 443.0 12 641.0 13 1190.5 14 1740.0 15 2110.0 16 2480.0 17 2433.5 18 2387.0 19 2196.5 20 2006.0 21 2368.5 22 2731.0 23 3473.5 24 4216.0 25 5354.5 26 6493.0 27 7981.0 28 9469.0 29 11218.5 30 12968.0 31 15131.5 32 17295.0 33 20262.0 34 23229.0 35 26791.0 36 30353.0 37 36237.5 38 42122.0 39 47091.5 40 52061.0 41 57329.5 42 62598.0 43 65934.5 44 69271.0 45 75811.0 46 82351.0 47 87520.5 48 92690.0 49 96682.5 50 100675.0 51 99229.5 52 97784.0 53 96551.0 54 95318.0 55 95711.0 56 96104.0 57 92416.0 58 88728.0 59 81284.0 60 73840.0 61 65233.0 62 56626.0 63 48863.5 64 41101.0 65 35008.5 66 28916.0 67 24653.0 68 20390.0 69 18108.0 70 15826.0 71 12504.0 72 9182.0 73 8056.5 74 6931.0 75 5124.0 76 3317.0 77 2903.5 78 2490.0 79 2158.0 80 1826.0 81 1418.0 82 1010.0 83 821.0 84 632.0 85 496.0 86 360.0 87 239.5 88 119.0 89 83.0 90 47.0 91 28.5 92 10.0 93 14.0 94 18.0 95 15.0 96 12.0 97 12.5 98 13.0 99 10.5 100 8.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.03143927575341128 2 0.004287173966374265 3 4.7635266293047395E-4 4 0.0 5 0.0 6 3.175684419536493E-4 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 6.351368839072986E-4 17 0.0 18 1.5878422097682465E-4 19 0.0 20 3.175684419536493E-4 21 0.0 22 0.0 23 7.939211048841233E-5 24 0.0014290579887914219 25 3.175684419536493E-4 26 6.351368839072986E-4 27 1.5878422097682465E-4 28 0.0014290579887914219 29 6.351368839072986E-4 30 0.0012702737678145972 31 6.351368839072986E-4 32 7.939211048841233E-4 33 1.5878422097682465E-4 34 7.939211048841233E-4 35 1.5878422097682465E-4 36 3.175684419536493E-4 37 0.0017466264307450712 38 0.0 39 9.527053258609479E-4 40 7.939211048841233E-5 41 0.0011908816573261848 42 0.004763526629304739 43 0.005001702960769976 44 0.005001702960769976 45 0.0019054106517218958 46 0.0021435869831871327 47 0.0011114895468377726 48 0.00444595818735109 49 0.004366566076862678 50 0.0015878422097682465 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1259571.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 61.226813629788055 #Duplication Level Percentage of deduplicated Percentage of total 1 80.24230188751066 49.12980462891806 2 12.37659382485717 15.155588069722315 3 3.3136238731829604 6.086478939677687 4 1.3522661054547815 3.3117977926623694 5 0.7302067087137329 2.235411503281833 6 0.4310037131072009 1.5833390409696737 7 0.2958474197832218 1.2679656383744697 8 0.20202263968982426 0.9895362007429356 9 0.15498212446625317 0.8540155485579511 >10 0.7897669648088881 8.600986889502227 >50 0.05894227446820031 2.541441710747626 >100 0.04668819420102405 5.735227022761625 >500 0.00483881774954649 1.8839276096435038 >1k 9.154520066709576E-4 0.624479404437678 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 1365 0.10837023081668282 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.5878422097682465E-4 2 0.0 0.0 0.0 0.0 1.5878422097682465E-4 3 0.0 0.0 0.0 0.0 1.5878422097682465E-4 4 0.0 0.0 0.0 0.0 1.5878422097682465E-4 5 0.0 0.0 0.0 0.0 1.5878422097682465E-4 6 0.0 0.0 0.0 0.0 1.5878422097682465E-4 7 0.0 0.0 0.0 0.0 1.5878422097682465E-4 8 0.0 0.0 0.0 0.0 1.5878422097682465E-4 9 0.0 0.0 0.0 0.0 1.5878422097682465E-4 10 0.0 0.0 0.0 0.0 1.5878422097682465E-4 11 0.0 0.0 0.0 0.0 2.3817633146523698E-4 12 0.0 0.0 0.0 0.0 3.175684419536493E-4 13 0.0 0.0 0.0 0.0 3.175684419536493E-4 14 0.0 0.0 0.0 0.0 3.175684419536493E-4 15 0.0 0.0 0.0 7.939211048841233E-5 3.175684419536493E-4 16 0.0 0.0 0.0 7.939211048841233E-5 3.175684419536493E-4 17 0.0 0.0 0.0 1.5878422097682465E-4 4.7635266293047395E-4 18 0.0 0.0 0.0 3.9696055244206163E-4 4.7635266293047395E-4 19 0.0 0.0 0.0 4.7635266293047395E-4 4.7635266293047395E-4 20 0.0 0.0 0.0 5.557447734188863E-4 4.7635266293047395E-4 21 0.0 0.0 0.0 7.939211048841233E-4 4.7635266293047395E-4 22 0.0 0.0 0.0 0.0013496658783030094 4.7635266293047395E-4 23 0.0 0.0 0.0 0.001508450099279834 4.7635266293047395E-4 24 0.0 0.0 0.0 0.0021435869831871327 4.7635266293047395E-4 25 0.0 0.0 0.0 0.002461155425140782 4.7635266293047395E-4 26 0.0 0.0 0.0 0.002937508088071256 4.7635266293047395E-4 27 0.0 0.0 0.0 0.0035726449719785548 4.7635266293047395E-4 28 0.0 0.0 0.0 0.004604742408327915 4.7635266293047395E-4 29 0.0 0.0 0.0 0.006113192507607749 4.7635266293047395E-4 30 0.0 7.939211048841233E-5 0.0 0.009368269037632654 4.7635266293047395E-4 31 0.0 1.5878422097682465E-4 0.0 0.01532267732426358 4.7635266293047395E-4 32 0.0 1.5878422097682465E-4 0.0 0.022706143599685924 4.7635266293047395E-4 33 0.0 1.5878422097682465E-4 0.0 0.029533865101689386 4.7635266293047395E-4 34 0.0 1.5878422097682465E-4 0.0 0.03890213413932204 4.7635266293047395E-4 35 0.0 1.5878422097682465E-4 0.0 0.04787344262451263 4.7635266293047395E-4 36 0.0 1.5878422097682465E-4 0.0 0.06057618030265861 4.7635266293047395E-4 37 0.0 1.5878422097682465E-4 0.0 0.08058299214573851 4.7635266293047395E-4 38 0.0 1.5878422097682465E-4 0.0 0.10773509393277553 4.7635266293047395E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 645 0.0 27.969898 1 GTATCAA 1470 0.0 26.939651 1 TCGTACG 50 0.0025794166 22.001587 41 CGTGCGT 70 8.123976E-4 18.857008 14 GTGCGTA 70 8.123976E-4 18.857008 15 TCAACGC 2175 0.0 17.902609 4 ATCAACG 2185 0.0 17.820673 3 GTAAACG 265 0.0 17.434528 27 CAACGCA 2245 0.0 17.344397 5 TATCAAC 2270 0.0 17.250977 2 GTCCTAT 315 0.0 16.762447 1 AACGCAG 2340 0.0 16.734257 6 TAAACGC 290 0.0 16.690197 28 GTACTAG 120 6.4049855E-6 16.500536 1 CGCAATA 240 0.0 16.49988 36 TAGGACG 80 0.0019890368 16.499226 4 TACACAA 270 0.0 16.295532 5 AACGCTT 285 0.0 16.21041 30 CCTATTC 300 0.0 16.132576 3 GTTACAC 195 8.931238E-10 15.79413 3 >>END_MODULE