##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062202_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 449269 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.26027613745885 32.0 32.0 32.0 32.0 32.0 2 31.442966240715474 32.0 32.0 32.0 32.0 32.0 3 31.581422265947573 32.0 32.0 32.0 32.0 32.0 4 31.65427171694464 32.0 32.0 32.0 32.0 32.0 5 31.63986386774961 32.0 32.0 32.0 32.0 32.0 6 35.293574673525214 36.0 36.0 36.0 36.0 36.0 7 35.291206381922635 36.0 36.0 36.0 36.0 36.0 8 35.247226049426956 36.0 36.0 36.0 36.0 36.0 9 35.31407018957462 36.0 36.0 36.0 36.0 36.0 10 35.20461683312225 36.0 36.0 36.0 36.0 36.0 11 35.321849493287985 36.0 36.0 36.0 36.0 36.0 12 35.24171710044539 36.0 36.0 36.0 36.0 36.0 13 35.27365787534862 36.0 36.0 36.0 36.0 36.0 14 35.2379732409759 36.0 36.0 36.0 36.0 36.0 15 35.219391945582714 36.0 36.0 36.0 36.0 36.0 16 35.227469511584374 36.0 36.0 36.0 36.0 36.0 17 35.21141454228981 36.0 36.0 36.0 36.0 36.0 18 35.210321655845384 36.0 36.0 36.0 36.0 36.0 19 35.19667059156096 36.0 36.0 36.0 36.0 36.0 20 35.19168916617884 36.0 36.0 36.0 36.0 36.0 21 35.18138353636685 36.0 36.0 36.0 36.0 36.0 22 35.1624216226804 36.0 36.0 36.0 36.0 36.0 23 35.12955044750473 36.0 36.0 36.0 36.0 36.0 24 35.121279233599466 36.0 36.0 36.0 36.0 36.0 25 35.088347960798544 36.0 36.0 36.0 36.0 36.0 26 35.048258393078534 36.0 36.0 36.0 36.0 36.0 27 35.048280651458256 36.0 36.0 36.0 36.0 36.0 28 35.0139916174942 36.0 36.0 36.0 36.0 36.0 29 34.99288177016442 36.0 36.0 36.0 36.0 36.0 30 34.959456361333636 36.0 36.0 36.0 36.0 36.0 31 34.97514406736276 36.0 36.0 36.0 36.0 36.0 32 34.92887112175556 36.0 36.0 36.0 36.0 36.0 33 34.916829338325144 36.0 36.0 36.0 36.0 36.0 34 34.905152592322196 36.0 36.0 36.0 32.0 36.0 35 34.8925454460468 36.0 36.0 36.0 36.0 36.0 36 34.859353750203105 36.0 36.0 36.0 32.0 36.0 37 34.832999828610475 36.0 36.0 36.0 32.0 36.0 38 34.814171465202364 36.0 36.0 36.0 32.0 36.0 39 34.7727664272407 36.0 36.0 36.0 32.0 36.0 40 34.78254675929121 36.0 36.0 36.0 32.0 36.0 41 34.743901760415255 36.0 36.0 36.0 32.0 36.0 42 34.71270441539479 36.0 36.0 36.0 32.0 36.0 43 34.70386338696861 36.0 36.0 36.0 32.0 36.0 44 34.65318328217616 36.0 36.0 36.0 32.0 36.0 45 34.629264427325275 36.0 36.0 36.0 32.0 36.0 46 34.578904843200846 36.0 36.0 36.0 32.0 36.0 47 34.56307913521743 36.0 36.0 36.0 32.0 36.0 48 34.53788042353245 36.0 36.0 36.0 32.0 36.0 49 34.502629827564334 36.0 36.0 36.0 32.0 36.0 50 34.112829952656426 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 1.0 20 2.0 21 11.0 22 39.0 23 101.0 24 234.0 25 546.0 26 1115.0 27 2272.0 28 3812.0 29 5757.0 30 8660.0 31 12592.0 32 18878.0 33 31846.0 34 71767.0 35 291636.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.876149189194 17.900966554670124 11.941770703218063 26.281113552917812 2 15.8776233427419 19.87774799882467 37.99272542716968 26.251903231263746 3 18.98973666110949 23.375527801829193 28.309988002733327 29.32474753432799 4 12.408378944463117 15.901163890675743 35.59493310243974 36.095524062421404 5 14.398500675541825 36.86521883326025 33.33437205772043 15.401908433477493 6 34.64813875014468 35.13248217099816 16.521986876430102 13.697392202427059 7 30.403388615729103 30.175685391157636 20.175440548980678 19.24548544413258 8 27.97945106383926 33.70052240417211 19.03314050157033 19.2868860304183 9 27.27363784280687 14.389152156057952 18.689248534842154 39.647961466293026 10 16.682692735739025 26.65313354167223 31.04182804027885 25.622345682309888 11 37.10405124769348 21.04195927161678 22.311577251045588 19.542412229644153 12 24.75332150671424 23.61391504866795 28.86689266341546 22.765870781202352 13 29.76969254500088 19.50791174107272 25.07985193725808 25.64254377666832 14 23.16340544306418 19.951966416556672 25.151969087562243 31.73265905281691 15 24.958766351562204 27.895759556078875 22.09811938949716 25.047354702861757 16 25.453683444366042 25.828293642755867 24.34654670830486 24.371476204573227 17 23.66199314887072 26.249974959322813 25.421740649811138 24.66629124199533 18 24.31916877936728 24.74653157253927 27.18094140010283 23.753358247990615 19 25.661685983230537 24.744640738622074 25.5281357048895 24.065537573257892 20 25.717115733475786 24.469299856432173 25.394143768154652 24.41944064193739 21 26.339676229608543 24.14410965368187 24.75554734468659 24.760666772022997 22 25.65434071792178 24.762892609995347 25.337158806861815 24.245607865221057 23 24.037492014806276 24.59150308612435 26.164947948779016 25.20605695029036 24 24.555272623668934 24.798336835357386 26.133631895722782 24.512758645250898 25 24.64876198616416 24.66189445943179 25.885885484833103 24.803458069570947 26 23.93454226551249 25.6515613209962 26.237181898514695 24.17671451497662 27 24.845526500885885 25.059875174728667 25.544218595582148 24.5503797288033 28 24.26168132768261 25.134442109761746 25.877435093842372 24.726441468713272 29 24.2129419411131 25.02960371092533 25.728740974206932 25.02871337375464 30 24.207646745892717 25.238223490472173 26.10030205024674 24.45382771338837 31 25.011574383218928 24.882252909176707 25.227926315695754 24.878246391908615 32 24.634071422847832 25.265988229742604 25.241949126134067 24.857991221275498 33 24.198696546382116 24.780086718840426 26.07441438072598 24.946802354051478 34 24.771793930085806 25.227427019687713 26.024729280046298 23.976049770180182 35 25.21880035969622 24.844190995129857 26.005858418583117 23.931150226590812 36 24.04350177733162 25.287300036281156 25.855333886825044 24.813864299562177 37 24.773462314946922 25.128933386457376 25.632424659943066 24.465179638652636 38 24.39073250101832 25.096768305847945 25.754503426677562 24.757995766456176 39 25.22920566520281 24.61131304407827 25.389020831617582 24.77046045910134 40 25.5884559139402 24.94006931259446 25.512109671488574 23.95936510197677 41 24.40547206097083 25.26487766658357 26.033690658499236 24.295959613946366 42 25.30985112899779 25.6453005912102 25.476796780397464 23.568051499394542 43 24.678354242162527 24.85108580484895 25.9593724680135 24.511187484975025 44 24.121919567632062 25.414972164533093 25.506235990446235 24.95687227738861 45 24.393783582853658 25.580618881632546 25.34801518935499 24.67758234615881 46 24.372692043155315 25.045797431782418 25.585572751696674 24.995937773365593 47 24.634235918667155 25.134831335625968 25.793907827228917 24.43702491847796 48 25.130994938275453 25.477124299394106 24.85720772658674 24.534673035743698 49 24.61575445680312 25.494983940150068 25.006399455100308 24.8828621479465 50 24.557557087433533 26.0706884770081 24.787709758339695 24.58404467721867 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 248.0 1 138.5 2 29.0 3 102.5 4 176.0 5 162.5 6 149.0 7 102.0 8 55.0 9 97.5 10 140.0 11 225.0 12 310.0 13 581.0 14 852.0 15 1120.0 16 1388.0 17 1327.0 18 1266.0 19 1192.0 20 1118.0 21 1246.0 22 1374.0 23 1599.5 24 1825.0 25 2236.0 26 2647.0 27 3442.0 28 4237.0 29 5189.5 30 6142.0 31 7178.5 32 8215.0 33 9552.5 34 10890.0 35 12811.0 36 14732.0 37 16346.5 38 17961.0 39 19028.0 40 20095.0 41 21411.5 42 22728.0 43 23561.0 44 24394.0 45 26547.0 46 28700.0 47 30524.0 48 32348.0 49 33414.0 50 34480.0 51 33536.0 52 32592.0 53 32562.0 54 32532.0 55 32552.5 56 32573.0 57 31304.0 58 30035.0 59 27357.0 60 24679.0 61 21516.0 62 18353.0 63 15665.5 64 12978.0 65 10912.5 66 8847.0 67 7640.0 68 6433.0 69 5813.5 70 5194.0 71 4164.5 72 3135.0 73 2715.0 74 2295.0 75 1652.0 76 1009.0 77 913.0 78 817.0 79 691.5 80 566.0 81 448.0 82 330.0 83 264.5 84 199.0 85 168.5 86 138.0 87 87.5 88 37.0 89 23.5 90 10.0 91 8.0 92 6.0 93 5.0 94 4.0 95 4.5 96 5.0 97 3.5 98 2.0 99 1.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.03294240199078948 2 0.007345265308757114 3 0.0 4 0.0 5 0.0 6 2.2258379723506406E-4 7 0.0 8 0.0 9 0.0 10 2.2258379723506406E-4 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 4.4516759447012813E-4 17 0.0 18 4.4516759447012813E-4 19 0.0 20 8.903351889402563E-4 21 0.0 22 0.0 23 0.0 24 0.0011129189861753205 25 2.2258379723506406E-4 26 4.4516759447012813E-4 27 2.2258379723506406E-4 28 0.0011129189861753205 29 2.2258379723506406E-4 30 0.0013355027834103844 31 2.2258379723506406E-4 32 2.2258379723506406E-4 33 2.2258379723506406E-4 34 8.903351889402563E-4 35 2.2258379723506406E-4 36 0.0 37 0.0013355027834103844 38 0.0 39 0.0 40 0.0 41 0.0011129189861753205 42 0.004674259741936346 43 0.003783924552996089 44 0.0048968435391714095 45 0.0015580865806454486 46 0.0017806703778805125 47 8.903351889402563E-4 48 0.003338756958525961 49 0.002671005566820769 50 4.4516759447012813E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 449269.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 64.85197346651942 #Duplication Level Percentage of deduplicated Percentage of total 1 81.34887776825555 52.756352625580405 2 12.253620110577017 15.893428925598993 3 3.077672365789085 5.987793798143814 4 1.169016098006101 3.03252003879303 5 0.5517858895910412 1.7892201935479013 6 0.3517461152224828 1.3686857838815842 7 0.2102552109070057 0.9544825751257006 8 0.16192151493221782 0.8400743832034254 9 0.11499490298447967 0.6711881757421007 >10 0.6448476207147158 8.053611900377083 >50 0.06936450010284352 3.1493449063417556 >100 0.04555280590312053 5.383786305928685 >500 3.4509701441757975E-4 0.11951038773553033 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 534 0.11885974772352423 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 476 0.10594988748389049 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 4.4516759447012813E-4 13 0.0 0.0 0.0 0.0 6.677513917051922E-4 14 0.0 0.0 0.0 4.4516759447012813E-4 6.677513917051922E-4 15 0.0 0.0 0.0 6.677513917051922E-4 6.677513917051922E-4 16 0.0 0.0 0.0 6.677513917051922E-4 6.677513917051922E-4 17 0.0 0.0 0.0 6.677513917051922E-4 6.677513917051922E-4 18 0.0 0.0 0.0 0.0013355027834103844 6.677513917051922E-4 19 0.0 0.0 0.0 0.0015580865806454486 6.677513917051922E-4 20 0.0 0.0 0.0 0.002671005566820769 8.903351889402563E-4 21 0.0 0.0 0.0 0.003116173161290897 8.903351889402563E-4 22 0.0 0.0 0.0 0.003783924552996089 8.903351889402563E-4 23 0.0 0.0 0.0 0.005342011133641538 8.903351889402563E-4 24 0.0 0.0 0.0 0.00600976252534673 8.903351889402563E-4 25 0.0 0.0 0.0 0.008013016700462306 8.903351889402563E-4 26 0.0 0.0 0.0 0.010016270875577883 8.903351889402563E-4 27 0.0 0.0 0.0 0.011574357456223332 8.903351889402563E-4 28 0.0 0.0 0.0 0.012687276442398652 8.903351889402563E-4 29 0.0 0.0 0.0 0.015135698211984357 8.903351889402563E-4 30 0.0 0.0 0.0 0.019809957953920702 8.903351889402563E-4 31 0.0 0.0 0.0 0.030493980221203778 8.903351889402563E-4 32 0.0 0.0 0.0 0.037839245529960895 8.903351889402563E-4 33 0.0 0.0 0.0 0.048300684000008906 8.903351889402563E-4 34 0.0 0.0 0.0 0.05675886829494134 8.903351889402563E-4 35 0.0 0.0 0.0 0.06944614473734 8.903351889402563E-4 36 0.0 0.0 0.0 0.08257858877420877 8.903351889402563E-4 37 0.0 0.0 0.0 0.10238854672812947 8.903351889402563E-4 38 0.0 0.0 0.0 0.1282082672073969 8.903351889402563E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TGACGTG 30 0.0057416465 29.332888 5 CGAGCAA 30 0.0057416465 29.332888 31 GTATCAA 685 0.0 27.314056 1 TCTAGCC 65 5.9180456E-7 27.076511 3 GGAGTGC 50 8.33084E-5 26.3996 6 GGACGTG 175 0.0 23.885353 6 ACTGATC 65 1.8103163E-5 23.691948 8 TAGGACG 195 0.0 22.56376 4 TGTAGGA 290 0.0 22.002113 2 TATAACA 95 6.847549E-7 20.84179 4 CCTATGC 85 6.100161E-6 20.705566 3 GGCGTTA 140 1.8371793E-10 20.428263 42 GTAGGAC 280 0.0 20.428263 3 TATAGGA 65 4.922341E-4 20.309643 2 GATTTCG 65 4.9260375E-4 20.307384 41 TAGGAGT 65 4.9260375E-4 20.307384 4 CTAGCCT 65 4.9260375E-4 20.307384 4 TTACCCT 55 0.0044796965 19.999697 4 CTGTAGG 320 0.0 19.948298 1 AGGACGT 205 0.0 19.31678 5 >>END_MODULE