FastQCFastQC Report
Thu 2 Feb 2017
SRR4062201_2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR4062201_2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences217
Sequences flagged as poor quality0
Sequence length25
%GC52

[WARN]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTT31.3824884792626728No Hit
ATCTAGATGAGGTTCTGTCTCTTCA20.9216589861751152No Hit
CACAGGGGCTTAACTTGCTTCATTC20.9216589861751152No Hit
ACGCTGGTCGCCCAGCCGATGGCGG20.9216589861751152No Hit
ATCATTGGCCGTGCCAAGGAGTAGA20.9216589861751152No Hit
TGTTAAGACAGTATTGCAATGAACT10.4608294930875576No Hit
GATCACCGCCGGGTGCGCCACCAGA10.4608294930875576No Hit
GCACTAGAAACCTCACCCTGAGCTT10.4608294930875576No Hit
ACAGTGGTGTGATCTCAGCTCACTG10.4608294930875576No Hit
ACAACAGTAGGCCCAGGGGACCGGC10.4608294930875576No Hit
GTTCTACTTCCCATGTGGATACAAA10.4608294930875576No Hit
CTGCATTTCTGTGCCACCTTCTGTC10.4608294930875576No Hit
CATATAAAGTTGCTCTAAAGATCAA10.4608294930875576No Hit
CGCCTGGCGGTCGCCGAACTCGACG10.4608294930875576No Hit
ATGACAAACAAAAAGATGATCAACA10.4608294930875576No Hit
CTCCAGAACAAGGGTCTTAAGACCT10.4608294930875576No Hit
GGGTAAGCGCACCCGACTGCTCTTC10.4608294930875576No Hit
AGCCAAAGCGTCGAGACGTCGACAA10.4608294930875576No Hit
CGGTCGGCGTCCTCCTCGCTCACCT10.4608294930875576No Hit
GTTTCATGTGGTGCAGGGTTATAAA10.4608294930875576No Hit
CTCGATGCCGGCCTGCTGCATCACA10.4608294930875576No Hit
CAATAGAATTCACAGAGAATAATGT10.4608294930875576No Hit
CACTGTAGCTGTCTTCAGACACTCC10.4608294930875576No Hit
ATCTCATACTGCTCGCTGCTGTCCT10.4608294930875576No Hit
GGTGAGATGGCTCAGTGGGTAAGCG10.4608294930875576No Hit
TCCCGCCACGAAACTGGTCCTGAAC10.4608294930875576No Hit
CACTTGCTCATCCTTTAACGGAGTT10.4608294930875576No Hit
CAGGCCGAGTGAAGAGGAAGAATGC10.4608294930875576No Hit
TCACCGCATTGCGTCGTTCGGCGCG10.4608294930875576No Hit
GAGCGGACCGCTGGCGCCGCCCGTC10.4608294930875576No Hit
GTCTTCCGCGGGATACCGAGCGCCG10.4608294930875576No Hit
AGCCGACACAGCGCAGCTCTTCCTC10.4608294930875576No Hit
GGAATATTACTAAGCCTAAAAAACC10.4608294930875576No Hit
CTTAAGTGTCCGCTCCTTAATTCTC10.4608294930875576No Hit
GTGTTGTTCCCTGACCCTGGTATGG10.4608294930875576No Hit
ATGTTAAGACAGTATTGCAATGAAC10.4608294930875576No Hit
TTCCATCATGGTCAATATCACTCAA10.4608294930875576No Hit
GCCAACCGCTGTCGTTCGCGAACAT10.4608294930875576No Hit
CCGGTGAAGCCATCCATCTCGGTAA10.4608294930875576No Hit
CTTCTGGCCCAATGAGGATTGTGAC10.4608294930875576No Hit
CTTCGAGCACGGCCGCGCGCAGTTC10.4608294930875576No Hit
TCTTTAAGCTGGGCCTGGCCAAATC10.4608294930875576No Hit
TTCTTCCTCTTCACTCGGCCTGCAC10.4608294930875576No Hit
CTTTTAGGGATGCCATGTTCCTATT10.4608294930875576No Hit
GCTTGCGGACCCTAATGTGACGTTG10.4608294930875576No Hit
TATATATTCTCACCATCATTGGCCG10.4608294930875576No Hit
GTTCATGGCCGCGCTGGCCGCACGG10.4608294930875576No Hit
TGCCGAGGCCGCGCGCCGGGCGAAG10.4608294930875576No Hit
GGCGTTGAGCAGACGGTCGGCGCCG10.4608294930875576No Hit
ACAGAGCTAACTGTACGAGGTTACC10.4608294930875576No Hit
CCGTTCCGCCTCGTCACCCTGCGGA10.4608294930875576No Hit
GGGTTGGAAAGACCGTCCAGCCGGA10.4608294930875576No Hit
GTGTAGTAGGAGACCTCAGAAGCCC10.4608294930875576No Hit
GGGCATCAGCCTCAACAAGCTCCGG10.4608294930875576No Hit
TATCAACGCAGAGTACATGGGGGGC10.4608294930875576No Hit
CGGCTCGACCACGGGCGCGCAGTGG10.4608294930875576No Hit
ATGTGGGACAACGCAGACTCTCACA10.4608294930875576No Hit
GGTCCAGCCCGTGGCGACGCCGCGC10.4608294930875576No Hit
ATGCCGAGCAAAATGAGGGCCAGGA10.4608294930875576No Hit
GATGTGATCTCCCCCATCAGCGTGC10.4608294930875576No Hit
GAGCAATTGGAAGAAGAAATTCAGG10.4608294930875576No Hit
TCTATGGCCACAGCATGGCCCCCTT10.4608294930875576No Hit
CTTAAGTCATCAGAGAATAGTACAC10.4608294930875576No Hit
TTCATGTGGTGCAGGGTTATAAACC10.4608294930875576No Hit
GCCCTGCACTCCATCGGGTCCGGTC10.4608294930875576No Hit
CAGTGGCTATTTATCGCTTTTCGAC10.4608294930875576No Hit
GATCTGGCTGTGCTGTTGAGCGAAC10.4608294930875576No Hit
CTCTGGTCCCCAGGCCTGGCCTGGT10.4608294930875576No Hit
ATACGAAGTAGCTGACGACAAGGGT10.4608294930875576No Hit
GAACTAATGTGAGAGTCTGCGTTGT10.4608294930875576No Hit
GGCCTGGACTGCCGCCGCCATAAGG10.4608294930875576No Hit
CAACTCGATGATCTGGCCCAGCATG10.4608294930875576No Hit
CTCCAAGAAATCCTCAATCTTCAGG10.4608294930875576No Hit
ATCGTAGCTCGCTCGTCGCCGCTCT10.4608294930875576No Hit
CCTCTGTAGTGATTTGGATTGATGG10.4608294930875576No Hit
GAGTGGACAGAAGGTGGCACAGAAA10.4608294930875576No Hit
CTATGGCTATAGCGACCGGCTGCGC10.4608294930875576No Hit
ATTCCATTCCATTCCATTCTATTCA10.4608294930875576No Hit
TCTGGAACGTGGGCATCAAGACGGC10.4608294930875576No Hit
CAGTATTGCAATGAACTCTTTGCTA10.4608294930875576No Hit
CGCCTGGATCGAACGGTCCCTCGCA10.4608294930875576No Hit
CTCCCTTTCGTCGCGGGCGATGAAC10.4608294930875576No Hit
ATACAACATTATCTAGCCCCAAGCT10.4608294930875576No Hit
GCTATATCATGTGCAAAAGCTATCT10.4608294930875576No Hit
CCACAGGTGAAAACGAATGAAACGG10.4608294930875576No Hit
ATCCTGTAGTCATGCTTTGTTGTTT10.4608294930875576No Hit
GGCATGGTGAATAGATTTGGCCAGG10.4608294930875576No Hit
CTCCACTTCCCAGGTTAAAGCAATT10.4608294930875576No Hit
GTCATGGCCTTTGCCGCGATCGCCT10.4608294930875576No Hit
GTATCTATGTCATTCAGCAGGAATG10.4608294930875576No Hit
GATACGGCCGACCTCCTGATCGCCA10.4608294930875576No Hit
GTGTGCCTCCATGCCTGGCCAGTGA10.4608294930875576No Hit
GGTGGCATGGTTGGCTCAGACCCAT10.4608294930875576No Hit
CAACGATGCCTATGCGTTCACGGGC10.4608294930875576No Hit
CTTTTTGGATATAGATAAGCGTATG10.4608294930875576No Hit
GCTTCGCCGCGCGTCTTCTCCGCCG10.4608294930875576No Hit
GTCTAAATACTGGGTGTTAAAGGGC10.4608294930875576No Hit
CTATTAATATTTTTATAGTCAAGGC10.4608294930875576No Hit
ATATTATATCTCAGTAAGAGTAAAC10.4608294930875576No Hit
GCCAGGTAGTGGGTTCGACACGTGC10.4608294930875576No Hit
GTTTTACTGTTGTGTAATTTTAGCT10.4608294930875576No Hit
TGCCCTGGGTGATCGCGGTGATGCT10.4608294930875576No Hit
GCATCGCTCGGCACCGAAATGCTCG10.4608294930875576No Hit
GTACGAGGCACCCAGCGGCCGCTGG10.4608294930875576No Hit
GCCACACACTAACAGAGAACCCTTC10.4608294930875576No Hit
GGCTAGCGGCGGATCGCTGGCGGGC10.4608294930875576No Hit
GCTCACGCCCGCATATGACATCTGC10.4608294930875576No Hit
ACGCAAGAGGGATTCGGCTGGATGA10.4608294930875576No Hit
TATTATCACGCCGCGTTTTGAAGAT10.4608294930875576No Hit
ATATTGCGATGCGTCCCCGCGATTT10.4608294930875576No Hit
ATTCCATTCCACTCGTGTTGATTCC10.4608294930875576No Hit
GCACGCCGTCCATCCCCTCCGCCAC10.4608294930875576No Hit
GCCCTGGATTAGCTGCCCCTTTTGC10.4608294930875576No Hit
GGCCATGATCTTTTTCTCCTTCAGG10.4608294930875576No Hit
CGTCAGTACCCTTGGGGCTGCAGAC10.4608294930875576No Hit
TCTATGGCCACAGCATCGCCCCCTT10.4608294930875576No Hit
GGGTAAGAGCACCCGACTGCTCTTC10.4608294930875576No Hit
GTATTGCAATGAACTCTTTGCTATA10.4608294930875576No Hit
AACGCAGAGTACTTTTTTTTTTTTT10.4608294930875576No Hit
CTTTAACACCCAGTATTTAGACATT10.4608294930875576No Hit
AGCCCAGGAAGACAGCAGAGGGGTG10.4608294930875576No Hit
TATAAACGCAGAGTACTTTTTTTTT10.4608294930875576No Hit
GACCGAATGGCAACTCCCGGTGAGC10.4608294930875576No Hit
TGCTAACTGTGTCCGTCCAGATGGT10.4608294930875576No Hit
GCTATCTGCCGACCCATATCAGCGA10.4608294930875576No Hit
GTTTCCGTGCCGGGTGGCACGATCA10.4608294930875576No Hit
GATAAAGCAAGTCAAGTTTATAAAG10.4608294930875576No Hit
GCTCGCCCGCGCGGGCGGCTTCGAT10.4608294930875576No Hit
GGTCGGATCGCTCCAGCCGTAGACC10.4608294930875576No Hit
GCCCTCAGTGACTCCTGTGCTCACC10.4608294930875576No Hit
TCCCGGCGACGTCGTGGCCGGCGCC10.4608294930875576No Hit
ACATTAGGGTCCGCAAGCAGGTGGT10.4608294930875576No Hit
TCTCACGGCCGTTCTTTTGCAGGCA10.4608294930875576No Hit
AAGTTGGCGTCCTTGGCGACGAAGT10.4608294930875576No Hit
AGTTTATAAAGAAGATGCATTTAGG10.4608294930875576No Hit
GTCCCAAGGAGTAGAACAAGCCCCA10.4608294930875576No Hit
AGACAAGAAGGTCTAACTTCAGCAG10.4608294930875576No Hit
ATGGTAAGGTCTTTATGGCACAGGA10.4608294930875576No Hit
GTGCCTGTCCTCCGTTTGATGGTTC10.4608294930875576No Hit
TCGCTTGATCTTGTGCTTTCAGGCA10.4608294930875576No Hit
GTTCACGGGCAATGTCCGTCTCGCT10.4608294930875576No Hit
ACATTATATTTGGCTAAGGGCAATT10.4608294930875576No Hit
CACCTGCACGCCGCGAATCGCCTCG10.4608294930875576No Hit
ATTCTATGCATGATCAGGTTTCCTT10.4608294930875576No Hit
CTCCAGCCCCCCGGACAGGAGGAAA10.4608294930875576No Hit
CCTTATAAGAAGTTTCTCAGTAGTC10.4608294930875576No Hit
AGCAAGTGTTTTAGGTCCACATTTC10.4608294930875576No Hit
GAACGCACTACCGTCATTCACATAA10.4608294930875576No Hit
TGTATGTACACTGCAAATACTTAAC10.4608294930875576No Hit
GTCGAGACGGGCGCCCGGCAGATGT10.4608294930875576No Hit
TTCCTATATATTCTCACCATCATTG10.4608294930875576No Hit
CCACGGGGAAGCCTGCCAGTAGTGT10.4608294930875576No Hit
GTATCATAGATATGTTTTATTTTGA10.4608294930875576No Hit
ACTATGAACTCTGGTTTGGAGCTGG10.4608294930875576No Hit
CGATGTCTACAGCCCGATCTCCGGC10.4608294930875576No Hit
AGCTTCATCTTGCCCTCGTCCAGCA10.4608294930875576No Hit
GTCCTATATTCCCTAAAGAATTAGA10.4608294930875576No Hit
GTCACGACCAGCACCGGGTAGGCCG10.4608294930875576No Hit
TCCTATATATTCTCACCATCATTGG10.4608294930875576No Hit
ATTCAGGGGTAAAGGAAACTTCAGA10.4608294930875576No Hit
GTGTACAGCTGATCTGGGACGTGAA10.4608294930875576No Hit
CTGCTGGGCAGTCAGCTTGCCGCTG10.4608294930875576No Hit
GTACTTTTTTTTTTTTTTTTTTTTG10.4608294930875576No Hit
GCCGAGGGCCTTGAGGTCGCCGCGG10.4608294930875576No Hit
CATAGAGATAGCGGCCACCCATGCC10.4608294930875576No Hit
ACATTATACTGAATTGGGAAAAATT10.4608294930875576No Hit
CATCAATAATGACTTTTTGCGAATC10.4608294930875576No Hit
CGTCAGGCGTGGGTCGCTACGCTTT10.4608294930875576No Hit
TATCGATATATGCTATGAACCTAAA10.4608294930875576No Hit
GTCCCGATTGCTTCCGTCTTTTTTG10.4608294930875576No Hit
CTCGTCGAACAGGACTGTGTGCTCA10.4608294930875576No Hit
ATATGTGTTTGCGGCCCTGAACCTG10.4608294930875576No Hit
CTCCATAGACGCGTCGAGAACTGCG10.4608294930875576No Hit
AAAATAGTCTCCCTTGAGATTTCCA10.4608294930875576No Hit
ATACAAGAGGGCGAGAGGGACTCCC10.4608294930875576No Hit
TCTCATTGATAGCTGCTGGCGCTTT10.4608294930875576No Hit
ACATCGACTTCTCCCTCCGTTCTCC10.4608294930875576No Hit
CTCCTACTACTTTCTTTCGATGGCA10.4608294930875576No Hit
CTCACATATACATTCCTGCTGAATG10.4608294930875576No Hit
CTGATACGCTGCAGGCCGAAGCGCG10.4608294930875576No Hit
GTCATATACTGTCAATTATATAATG10.4608294930875576No Hit
GAAAAACACATTCGTTGGAAACGGG10.4608294930875576No Hit
TTCGCTGACCTTGCCGGTATCGAGC10.4608294930875576No Hit
CGAAGGAGCGGCTGCCGCTGATGCG10.4608294930875576No Hit
CATCCACCCCGTAGATGCCTTTTTT10.4608294930875576No Hit
GGTCACGCCCGAGGGTGGCGGCGGA10.4608294930875576No Hit
GTCCAGACCCCGAACGCGCCCCAGG10.4608294930875576No Hit
GGTCATCATCGGTTAGCGTGGCGAG10.4608294930875576No Hit
GGCCAGCGTCACGCCATGCGCCTCG10.4608294930875576No Hit
GGATGACCAGGCCATTGCCGCTGTC10.4608294930875576No Hit
GCTTTTGTAGCACAGTGCTTACAGT10.4608294930875576No Hit
GTACATGGGGGAAAACAAAAGGTCA10.4608294930875576No Hit
GACATGGCGCCGCGACAATCCGCGC10.4608294930875576No Hit
CTTTATCCCTTTTGCCCTTGCCAAG10.4608294930875576No Hit
GCGCAGGCGGGGGTCCCGCTGTTAT10.4608294930875576No Hit
TTCACCACCTGCTTGCGGACCCTAA10.4608294930875576No Hit
TCACCAGCAAAGCCACCTGGAAGGT10.4608294930875576No Hit
GCGTAAAGGTGAAGGACGTTAATAA10.4608294930875576No Hit
TCTTCGAAACGCCGTCCAACCCGAC10.4608294930875576No Hit
CCAAAGCCCGGCGCCATGTGGATGA10.4608294930875576No Hit
GTCTTAACATAATGTCTAAATACTG10.4608294930875576No Hit
GCCTGGCCAGGCGTGGTGGTTCATG10.4608294930875576No Hit
CTCCGGCCTCGACCAAGGCCATCGC10.4608294930875576No Hit
CCTTCCGGCCGCCCGGCTGATTCCG10.4608294930875576No Hit
GCCTCCAGCCATGCTATCACCCTAC10.4608294930875576No Hit
GTGTTTGCGGCCCTGAACCTGTACA10.4608294930875576No Hit
GTTAATATAAAAAAAAAAAAAAAAA10.4608294930875576No Hit
GTATCACAGATTATAGAAGAGGAAG10.4608294930875576No Hit
TGCAGCAACTGCAGACTTTCGATCT10.4608294930875576No Hit
GTATTAATTAATCCTCTTCCTCATC10.4608294930875576No Hit
GCGTGATAGCGAACCGGTGTGCTTC10.4608294930875576No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers