##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062199_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3713491 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.307223041606942 32.0 32.0 32.0 32.0 32.0 2 31.4519660879749 32.0 32.0 32.0 32.0 32.0 3 31.569603103925658 32.0 32.0 32.0 32.0 32.0 4 31.643834601995803 32.0 32.0 32.0 32.0 32.0 5 31.6148914862053 32.0 32.0 32.0 32.0 32.0 6 35.25888119831178 36.0 36.0 36.0 36.0 36.0 7 35.26215386007399 36.0 36.0 36.0 36.0 36.0 8 35.21371615011319 36.0 36.0 36.0 36.0 36.0 9 35.29916404806151 36.0 36.0 36.0 36.0 36.0 10 35.176600401078126 36.0 36.0 36.0 36.0 36.0 11 35.29800960874821 36.0 36.0 36.0 36.0 36.0 12 35.22199811444272 36.0 36.0 36.0 36.0 36.0 13 35.256223321936154 36.0 36.0 36.0 36.0 36.0 14 35.2194624949946 36.0 36.0 36.0 36.0 36.0 15 35.19775327313302 36.0 36.0 36.0 36.0 36.0 16 35.207610035947305 36.0 36.0 36.0 36.0 36.0 17 35.19244990764755 36.0 36.0 36.0 36.0 36.0 18 35.187771829795736 36.0 36.0 36.0 36.0 36.0 19 35.178705428396086 36.0 36.0 36.0 36.0 36.0 20 35.17951086996037 36.0 36.0 36.0 36.0 36.0 21 35.17252956853807 36.0 36.0 36.0 36.0 36.0 22 35.15990829114706 36.0 36.0 36.0 36.0 36.0 23 35.12791333007135 36.0 36.0 36.0 36.0 36.0 24 35.11176895271861 36.0 36.0 36.0 36.0 36.0 25 35.0969995618678 36.0 36.0 36.0 36.0 36.0 26 35.05599044133943 36.0 36.0 36.0 36.0 36.0 27 35.04283866582685 36.0 36.0 36.0 36.0 36.0 28 35.02615517312416 36.0 36.0 36.0 36.0 36.0 29 35.00515175612382 36.0 36.0 36.0 36.0 36.0 30 34.98795553833307 36.0 36.0 36.0 36.0 36.0 31 34.993559698946356 36.0 36.0 36.0 36.0 36.0 32 34.969740063999076 36.0 36.0 36.0 36.0 36.0 33 34.94419940697311 36.0 36.0 36.0 36.0 36.0 34 34.935301849391855 36.0 36.0 36.0 36.0 36.0 35 34.92653301165938 36.0 36.0 36.0 36.0 36.0 36 34.905032219009016 36.0 36.0 36.0 32.0 36.0 37 34.89686470224379 36.0 36.0 36.0 32.0 36.0 38 34.877478362004915 36.0 36.0 36.0 32.0 36.0 39 34.865106176371505 36.0 36.0 36.0 32.0 36.0 40 34.85005484057993 36.0 36.0 36.0 32.0 36.0 41 34.82727735168875 36.0 36.0 36.0 32.0 36.0 42 34.800021327640216 36.0 36.0 36.0 32.0 36.0 43 34.79229490525223 36.0 36.0 36.0 32.0 36.0 44 34.75239498358822 36.0 36.0 36.0 32.0 36.0 45 34.736117577772504 36.0 36.0 36.0 32.0 36.0 46 34.729731134396175 36.0 36.0 36.0 32.0 36.0 47 34.702841342553405 36.0 36.0 36.0 32.0 36.0 48 34.67942967951181 36.0 36.0 36.0 32.0 36.0 49 34.67062852717295 36.0 36.0 36.0 32.0 36.0 50 34.25459843581148 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 1.0 18 5.0 19 14.0 20 48.0 21 118.0 22 261.0 23 693.0 24 1812.0 25 4147.0 26 8716.0 27 16281.0 28 28695.0 29 45185.0 30 67880.0 31 100807.0 32 152652.0 33 259622.0 34 599460.0 35 2427094.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.901914065709384 17.713707705963085 12.066062272123009 26.31831595620452 2 16.4166712672032 19.719659012720374 36.77626715607399 27.08740256400244 3 18.8096458230723 23.07351346431369 28.18324467891734 29.93359603369667 4 13.045386696984965 15.80424770344008 34.58911551912501 36.561250080449945 5 15.129006710400919 36.16544979667369 32.637393028496916 16.068150464428467 6 35.47083130805699 34.2053084905419 16.25987448448021 14.063985716920898 7 31.222884342522978 29.7479379915018 19.901731281966214 19.12744638400901 8 28.502640776563076 32.917812376548106 18.65341803709771 19.92612880979111 9 27.202920378694873 14.52888939275738 18.351518826893614 39.91667140165413 10 16.87357462137339 26.482387039459137 30.308332841881498 26.33570549728597 11 37.53586584698873 21.07790216806773 21.59803268676294 19.788199298180604 12 24.765052614911415 23.320697424606657 27.99505909668288 23.91919086379905 13 29.574570128216283 19.280348329913817 24.820472164871276 26.324609376998627 14 23.969251574865808 19.108219193206608 24.593677485686648 32.328851746240936 15 25.522264629158926 26.635879823055987 21.724167367040877 26.11768818074421 16 26.21224761503649 25.55940879079805 23.054153603876046 25.174189990289413 17 24.532279733544527 25.83076140483443 24.528401980777655 25.10855688084339 18 25.362052088536778 24.924807828764624 25.22961584603142 24.483524236667172 19 26.00870717069195 24.813551453335958 24.758778195503908 24.41896318046819 20 26.22700910547274 24.140987930192722 24.34198532320483 25.290017641129708 21 26.936271018295184 24.026152210951903 24.197608126692646 24.839968644060264 22 26.36737237278884 23.98473565709463 24.576146811719752 25.071745158396773 23 25.012784473038696 24.03424380683503 25.103803996726526 25.849167723399745 24 25.211561739673698 24.547570927882525 24.837166466269284 25.403700866174496 25 25.366139236586292 24.12183403267772 24.834885247738104 25.67714148299788 26 25.117585312297862 24.94507838212951 25.046492852784212 24.890843452788413 27 25.602986096318897 24.45796755978292 24.51855767519228 25.420488668705904 28 25.309855623773537 24.317132737099975 24.943212771612608 25.42979886751388 29 25.11596957458164 24.672287997707805 25.021852852611865 25.18988957509868 30 25.038380823402974 24.714665069586363 25.164570992472484 25.08238311453818 31 25.58193518087655 24.453772641883393 24.407724092170348 25.556568085069713 32 25.490518698563903 24.46996297530044 24.33976119890119 25.69975712723447 33 25.036286698037046 24.307025050882164 24.82710297235856 25.829585278722234 34 25.684456743260185 24.36808191614496 24.838560090654095 25.108901249940757 35 25.997243560363497 24.16882681124959 24.94890245984501 24.885027168541903 36 25.023623374605457 24.804018222245798 24.568255731882978 25.60410267126576 37 25.828922770675337 24.514667555691037 24.627393404595317 25.02901626903831 38 25.20749343407591 24.34232370564517 24.914022950372036 25.536159909906875 39 25.82555038936712 24.3412750689249 24.325952440068054 25.507222101639925 40 25.858821254716922 24.541704827075115 24.611396661524157 24.988077256683805 41 24.99473535391617 24.92902826212821 25.00119834655105 25.075038037404568 42 26.071895521644468 24.740224678554547 24.481344785844417 24.70653501395657 43 25.69156293222683 24.103661190177654 24.726983449886465 25.47779242770905 44 25.289598944342334 24.626581298431997 24.519184289013214 25.564635468212447 45 25.40070323522133 24.845552967637015 24.49611664107024 25.257627156071415 46 25.356996764967178 24.604749975022948 24.590261939904813 25.447991320105057 47 25.326650243493116 24.551468552710524 24.94269482950096 25.179186374295398 48 25.947186615603908 25.09730460914018 23.994604317031115 24.960904458224796 49 25.34601589242679 25.096186964784543 24.15477059607507 25.40302654671359 50 25.538450103892995 25.08466552271266 24.27299137510381 25.103892998290533 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 106.0 1 77.0 2 48.0 3 167.0 4 286.0 5 324.5 6 363.0 7 335.5 8 308.0 9 422.0 10 536.0 11 823.0 12 1110.0 13 2053.0 14 2996.0 15 3976.5 16 4957.0 17 5071.5 18 5186.0 19 5303.5 20 5421.0 21 6507.5 22 7594.0 23 9419.5 24 11245.0 25 14439.5 26 17634.0 27 22162.0 28 26690.0 29 31527.5 30 36365.0 31 42894.0 32 49423.0 33 57434.0 34 65445.0 35 76767.5 36 88090.0 37 104509.5 38 120929.0 39 135712.5 40 150496.0 41 166485.0 42 182474.0 43 193693.5 44 204913.0 45 223785.5 46 242658.0 47 258992.0 48 275326.0 49 286720.5 50 298115.0 51 292409.0 52 286703.0 53 285428.5 54 284154.0 55 285390.0 56 286626.0 57 277317.0 58 268008.0 59 245519.5 60 223031.0 61 197180.5 62 171330.0 63 148192.5 64 125055.0 65 105491.0 66 85927.0 67 74033.0 68 62139.0 69 54630.0 70 47121.0 71 36998.5 72 26876.0 73 23329.0 74 19782.0 75 14714.0 76 9646.0 77 8331.0 78 7016.0 79 6002.5 80 4989.0 81 3827.0 82 2665.0 83 2279.0 84 1893.0 85 1471.5 86 1050.0 87 717.0 88 384.0 89 254.0 90 124.0 91 98.5 92 73.0 93 60.5 94 48.0 95 59.0 96 70.0 97 57.0 98 44.0 99 33.5 100 23.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.03328404458230813 2 0.0042008988307767545 3 2.154307092706028E-4 4 5.38576773176507E-5 5 5.38576773176507E-5 6 1.615730319529521E-4 7 0.0 8 0.0 9 0.0 10 1.077153546353014E-4 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 4.5779025720003093E-4 17 0.0 18 1.615730319529521E-4 19 0.0 20 2.692883865882535E-4 21 0.0 22 0.0 23 5.38576773176507E-5 24 9.694381917177125E-4 25 3.500749025647295E-4 26 4.5779025720003093E-4 27 3.7700374122355486E-4 28 0.0018311610288001237 29 4.5779025720003093E-4 30 0.0012925842556236167 31 5.116479345176816E-4 32 6.462921278118084E-4 33 2.4235954792942814E-4 34 9.425093530588872E-4 35 1.3464419329412675E-4 36 2.154307092706028E-4 37 0.0015349438035530446 38 0.0 39 7.80936321105935E-4 40 0.0 41 0.0011040823850118392 42 0.0050087639905415145 43 0.004389400701388532 44 0.0044701872173650075 45 0.0022081647700236784 46 0.0022081647700236784 47 0.0010502247076941886 48 0.004093183476141453 49 0.004039325798823802 50 0.001481086126235394 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 3713491.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 46.27294072196072 #Duplication Level Percentage of deduplicated Percentage of total 1 68.05569890483275 31.49137321214933 2 16.85899388107429 15.602304489816984 3 6.520262582042394 9.051351718513988 4 3.0034089369608763 5.559062548151908 5 1.5887565733394247 3.675821936988032 6 0.9538282023428487 2.6481861519566996 7 0.6218955715863727 2.014385584348627 8 0.42510742520804334 1.5736776549693712 9 0.315204113183868 1.312687912020779 >10 1.498305118200762 12.107741662617439 >50 0.08569891485623905 2.7705205416550154 >100 0.05909649226423576 5.550132358446571 >500 0.008772309024899732 2.8111891337036723 >1k 0.004970975082885986 3.8315650946615127 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 3843 0.1034875269658658 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 3836 0.10329902509525403 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 8.078651597647605E-5 2 0.0 0.0 0.0 0.0 8.078651597647605E-5 3 0.0 0.0 0.0 0.0 8.078651597647605E-5 4 0.0 0.0 0.0 2.692883865882535E-5 8.078651597647605E-5 5 0.0 0.0 0.0 2.692883865882535E-5 1.077153546353014E-4 6 0.0 0.0 0.0 2.692883865882535E-5 1.8850187061177743E-4 7 0.0 0.0 0.0 2.692883865882535E-5 1.8850187061177743E-4 8 0.0 0.0 0.0 2.692883865882535E-5 1.8850187061177743E-4 9 0.0 0.0 0.0 2.692883865882535E-5 1.8850187061177743E-4 10 0.0 0.0 0.0 2.692883865882535E-5 2.4235954792942814E-4 11 0.0 0.0 0.0 2.692883865882535E-5 2.692883865882535E-4 12 0.0 0.0 0.0 2.692883865882535E-5 6.462921278118084E-4 13 0.0 0.0 0.0 2.692883865882535E-5 7.540074824471097E-4 14 0.0 0.0 0.0 2.692883865882535E-5 7.540074824471097E-4 15 0.0 0.0 0.0 5.38576773176507E-5 8.617228370824112E-4 16 0.0 0.0 0.0 5.38576773176507E-5 9.694381917177125E-4 17 0.0 0.0 0.0 5.38576773176507E-5 9.694381917177125E-4 18 0.0 0.0 0.0 5.38576773176507E-5 0.001077153546353014 19 0.0 0.0 0.0 5.38576773176507E-5 0.001077153546353014 20 0.0 0.0 0.0 5.38576773176507E-5 0.0012117977396471408 21 0.0 0.0 0.0 5.38576773176507E-5 0.0012117977396471408 22 0.0 2.692883865882535E-5 0.0 8.078651597647605E-5 0.0012925842556236167 23 0.0 2.692883865882535E-5 0.0 1.077153546353014E-4 0.0012925842556236167 24 0.0 2.692883865882535E-5 0.0 1.077153546353014E-4 0.0012925842556236167 25 0.0 2.692883865882535E-5 0.0 1.615730319529521E-4 0.0012925842556236167 26 0.0 2.692883865882535E-5 0.0 1.8850187061177743E-4 0.0015080149648942194 27 0.0 2.692883865882535E-5 0.0 1.8850187061177743E-4 0.0015349438035530448 28 0.0 2.692883865882535E-5 0.0 3.231460639059042E-4 0.0015349438035530448 29 0.0 2.692883865882535E-5 0.0 5.116479345176816E-4 0.0015349438035530448 30 0.0 2.692883865882535E-5 0.0 8.886516757412365E-4 0.0015349438035530448 31 0.0 2.692883865882535E-5 0.0 0.002073520576729552 0.0015618726422118702 32 0.0 2.692883865882535E-5 0.0 0.003500749025647295 0.0015888014808706956 33 0.0 2.692883865882535E-5 0.0 0.004847190958588563 0.0016157303195295208 34 0.0 2.692883865882535E-5 0.0 0.006489850116776909 0.001696516835505997 35 0.0 2.692883865882535E-5 0.0 0.008482584177529985 0.0017234456741648224 36 0.0 2.692883865882535E-5 0.0 0.011687115977930202 0.0017234456741648224 37 0.0 2.692883865882535E-5 0.0 0.016776666484448192 0.0017234456741648224 38 0.0 2.692883865882535E-5 0.0 0.024289812470260463 0.0017503745128236475 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 4140 0.0 26.740211 1 GGTATCA 2040 0.0 25.24544 1 CGCAATA 800 0.0 17.324963 36 TCAACGC 6390 0.0 16.972673 4 ATCAACG 6520 0.0 16.735485 3 CAACGCA 6575 0.0 16.528574 5 AACGCAG 6655 0.0 16.495165 6 TACCGTA 175 3.6343408E-9 16.342163 7 TATCAAC 6885 0.0 16.073019 2 GTACTAA 325 0.0 15.575488 1 ATACCGT 1105 0.0 15.528752 6 CTAGCGG 880 0.0 15.249557 29 TACGAAT 930 0.0 15.140773 41 ATACGAA 945 0.0 15.133262 40 CGTCGTA 995 0.0 15.0347395 10 AATACGA 950 0.0 14.822018 39 TACCGTC 1090 0.0 14.733319 7 ACCGTCG 1040 0.0 14.595531 8 CAATACG 950 0.0 14.590227 38 TCTAGCG 925 0.0 14.507881 28 >>END_MODULE